prot_M-pyrifera_M_contig104931.1056.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104931.1056.1
Unique Nameprot_M-pyrifera_M_contig104931.1056.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length183
Homology
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: UPI001C08AF4F (glycerophosphodiester phosphodiesterase family protein n=1 Tax=Pacificibacter marinus TaxID=658057 RepID=UPI001C08AF4F)

HSP 1 Score: 258 bits (660), Expect = 1.160e-83
Identity = 120/179 (67.04%), Postives = 145/179 (81.01%), Query Frame = 0
Query:    1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRMD 179
            IP++A +A  AGV+ QVTVKTNA  A ++  V +IL   + PIDF+P+L+D  DG+D L  +CE   +SCVECVVE P+GP GF   DRLG T DGG LFSI+ARR+A++HN RQFINTLYVDPAIP TQWNGGRNCQLARI+PDSVYSFWIAHGASVIQTDEPEF ++WL Q+GFR++
Sbjct:  137 IPDIAKIAHDAGVTEQVTVKTNARGAAQIAKVGDILAGLTHPIDFIPILIDQIDGIDALQTVCEDLPISCVECVVELPLGPKGFVGLDRLGITPDGGSLFSIDARRIAEAHNVRQFINTLYVDPAIPGTQWNGGRNCQLARISPDSVYSFWIAHGASVIQTDEPEFLLEWLRQNGFRLE 315          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A6L7LNF2_9RHOB (Glycerophosphodiester phosphodiesterase family protein n=3 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7LNF2_9RHOB)

HSP 1 Score: 219 bits (557), Expect = 5.850e-68
Identity = 107/179 (59.78%), Postives = 132/179 (73.74%), Query Frame = 0
Query:    1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVG-PGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDT-QWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 177
            IP +A +A  AGVS Q+TVK+N   ATR E VAEI+ RT  P+DF+PVLVDSRDGL+ + A CE+ + +CVEC+V+   G   G+    R G T DGGPLFS+EARR+A   N R F+NTL+V+P I    QWNGGR+C+L RIAPDSVY FWIAHGA+VIQTD+P F +DWL  SGFR
Sbjct:  147 IPEIARIAADAGVSGQLTVKSNLGDATRFERVAEIISRTPHPVDFIPVLVDSRDGLEGMRAACEVLSPNCVECIVDYGFGRDAGYNLLARRGMTIDGGPLFSLEARRIAAGRNLRLFVNTLFVNPHISGHHQWNGGRSCELGRIAPDSVYGFWIAHGATVIQTDDPPFVLDWLKASGFR 325          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A3S2WJS7_9RHOB (Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Rhodobacteraceae bacterium CCMM004 TaxID=2499834 RepID=A0A3S2WJS7_9RHOB)

HSP 1 Score: 186 bits (471), Expect = 4.500e-55
Identity = 94/178 (52.81%), Postives = 112/178 (62.92%), Query Frame = 0
Query:    1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDT-QWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 177
            I +VA +A   GV+ QVT+KTN    T    V+  +     P+D +PV+VDSRDGLD     C      CVECVV+ P G GG+    R G T DGG LFS  ARRLA   N R F+NTLYV P      QWNGGR+C+L R APDSVY FWIAHGA+VIQTDE  F +DWL ++GF 
Sbjct:  142 IGDVAGLADRCGVADQVTIKTNLKDGTDYAEVSRRIAACPGPVDLIPVIVDSRDGLDGFERACRTLAPRCVECVVDYPFGDGGYNLLARRGLTMDGGVLFSPRARRLAAEMNIRLFVNTLYVTPVDNGLHQWNGGRDCELGRAAPDSVYGFWIAHGATVIQTDEAAFVLDWLRRAGFH 319          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A432Z3I6_9GAMM (GP-PDE domain-containing protein n=2 Tax=Pseudidiomarina sediminum TaxID=431675 RepID=A0A432Z3I6_9GAMM)

HSP 1 Score: 113 bits (282), Expect = 7.560e-27
Identity = 66/175 (37.71%), Postives = 95/175 (54.29%), Query Frame = 0
Query:    7 VARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDG-LDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAI--PD-TQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 177
            +A+A GV  Q+ +K  AD   +L  +  ++   S P+DF+P+  D     L  L    E       E VV       G P   ++  T DGG LFS   +RLA+ ++   ++NTLYVDP +  P+  QWNGGR+  L    PD V+ FW   GA+++QTDEP+F +D+L Q G R
Sbjct:  163 IAKAQGVEQQIILKEVADTPAQLTAIETLMAELSYPVDFMPMHWDKNGASLQQLRNSFERIQPQAAEMVV-------GLPQQAKVARTPDGGVLFSPAVKRLAKEYDVHLWVNTLYVDPLLGKPEYLQWNGGRHDVLGLKYPDQVFGFWAEQGATIMQTDEPKFLLDYLKQRGLR 330          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A846C729_9CYAN (DUF839 domain-containing protein n=1 Tax=Okeania sp. SIO2F4 TaxID=2607790 RepID=A0A846C729_9CYAN)

HSP 1 Score: 103 bits (257), Expect = 2.460e-22
Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 0
Query:    3 NVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSR-DGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQW-NGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 177
            NV  +AR  GV  Q+ +K   +   +   V E L +   P++F+P++ D+     + +  + E F  +  E +V         P  D    T DGG LFS E + +A+ ++ R +INTL+ +P I D  + NG RN  LA   PD V+ FW+  GAS++QTDEP  A+D+L  +G R
Sbjct:  938 NVMNIARDMGVDEQIVIKNPVNNEEQFAAVQETLSQLPFPVEFMPIIDDNLVSNSEFIVKVFEEFQPNAAEMLVR--------PQGDSQELTEDGGFLFSEEVQAIAEEYDVRLWINTLFANPEISDNGFINGFRNDVLALTEPDEVFGFWVDAGASILQTDEPLLAVDYLNDNGER 1106          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A3S5BHP2_9ALTE (Glycerophosphoryl diester phosphodiesterase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A3S5BHP2_9ALTE)

HSP 1 Score: 100 bits (250), Expect = 3.520e-22
Identity = 63/170 (37.06%), Postives = 88/170 (51.76%), Query Frame = 0
Query:    7 VARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSR-DGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGY-TADGGPLFSIEARRLAQSHNFRQFINTLYVDPA---IPDTQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWL 171
            +A   GV   + +K  AD   + + + E++      +DF+P+L D +    D + A       S VE VV       G P +D   Y T DGG LFS + R L Q  N   ++NTLY+D     +   QWNGGR+  L    P  V+ FWI HGA++IQTDEP+F I +L
Sbjct:  164 IANKMGVLDHIILKGKADTPEQRKAIDELMASLPFTVDFMPMLRDKKISSFDDIKATYTQLNPSAVEMVV-------GIPDYDDGRYLTKDGGILFSAKTRALNQQFNSHLWMNTLYIDALRGRLDALQWNGGRHDILGLKYPSQVFDFWIDHGATIIQTDEPKFLIQYL 326          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A2T3NPS4_9GAMM (Glycerophosphodiester phosphodiesterase n=1 Tax=Photobacterium sanctipauli TaxID=1342794 RepID=A0A2T3NPS4_9GAMM)

HSP 1 Score: 99.0 bits (245), Expect = 1.910e-21
Identity = 62/179 (34.64%), Postives = 93/179 (51.96%), Query Frame = 0
Query:    2 PNVAAVARAAGVSHQVTVKTNA-DRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIA--PDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 177
            P +  +A+ AGV HQ+    N  D   R      +        +F+P L DS   LD ++   E FT + ++  + +   P G         T DGG LFS E+R+LA+ +N   +INTLY    +   + +GGR  ++A  A  P  VY FW+  G ++ QTDEPEFA+ WL ++G+R
Sbjct:  170 PEMFELAKQAGVEHQILATINQNDEEQRKAATKMVASLEGSKANFLPNLYDSHVDLDVVNRSLEEFTPAAIQ--LRNYHAPDGK-------ITMDGGVLFSAESRKLAEKYNTHMWINTLYTYREMAGMR-SGGRGDEMAVYANLPSEVYGFWVDKGVTIFQTDEPEFAMKWLQENGYR 338          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A3F2U0F2_9HYPH (Glycerophosphodiester phosphodiesterase n=1 Tax=Mesorhizobium sp. YM1C-6-2 TaxID=1827501 RepID=A0A3F2U0F2_9HYPH)

HSP 1 Score: 99.0 bits (245), Expect = 2.120e-21
Identity = 61/182 (33.52%), Postives = 97/182 (53.30%), Query Frame = 0
Query:    1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDS--RDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIA--PDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRM 178
            +P + AVA   G++ ++ +K+N   A++++ +  +L RT+  + F+P++ D   RD  + L A    F    VE +       GG P       T +GGPLF   AR +A   ++  ++NT Y     P    +GGR  QLA +A  P   Y FW+  GA++IQTDEP  AI+WL  + +R+
Sbjct:  164 LPEIVAVAERMGMADEIIIKSNLWSASKVDEMKRLLQRTAPGVVFMPIIADDAVRDA-EFLEAATSAFAADAVELIAWHR---GGEPM------TENGGPLFGARARAVAARGDWHLWVNT-YAIVNKPAGMLSGGRGDQLATVASMPGEAYGFWVDRGATIIQTDEPRAAIEWLEANDYRV 334          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A562CD79_9HYPH (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Mesorhizobium sp. J18 TaxID=935263 RepID=A0A562CD79_9HYPH)

HSP 1 Score: 98.2 bits (243), Expect = 3.510e-21
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = 0
Query:    4 VAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDS--RDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIA--PDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRMDLG 181
            +AAVAR +GV  +V +K N   A ++  +  ++ R  D I F+P++ D   +D     HA    F    VE +     G G          T DGG LF   AR +A   ++  ++NT+ ++   P    +GGR  Q+A  A  P+ +Y FW   GA++IQTDEP  AI+WL Q+G+R+  G
Sbjct:  165 IAAVARESGVESEVVIKQNLWNAEKVAEMRRVMARIGDGIRFMPIMADDAVKDVAFLEHAT-RPFGPDAVEMITWHRKGTG---------MTDDGGLLFGARARAVAARGDWHLWVNTIAIE-GQPMGPMSGGRGDQMAVSAGMPEEIYGFWAEEGATMIQTDEPALAIEWLEQNGYRVPYG 335          
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: UPI000ABD0396 (glycerophosphodiester phosphodiesterase family protein n=1 Tax=Rhizobium arenae TaxID=1856850 RepID=UPI000ABD0396)

HSP 1 Score: 96.7 bits (239), Expect = 1.400e-20
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = 0
Query:    1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSR-DGLDTLHALCEMFTLSCVECV----VESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRM 178
            +P+VAA ARA G +HQ+ +K N   A R+E    +++   D + F+P++ D   D    +      F+    E +     E P+             T  GGPLFS +A   A + N+  + NT Y     P     GGR  +LA   P+  Y FWI  G +++QTDEP+ AI WL  +G+R+
Sbjct:  169 LPDVAAEARAVGTAHQIVMKENLWSAKRIEEARAVMNTVGDDVIFMPIIADDAIDNAAFMGRATAAFSAPAAELINWRRQEGPL-------------TDKGGPLFSAKAHAAAIAGNWHMWANT-YPIVNRPPGMLAGGRGDELAMRDPEESYGFWIDRGVTILQTDEPKAAIQWLEANGYRI 337          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C08AF4F1.160e-8367.04glycerophosphodiester phosphodiesterase family pro... [more]
A0A6L7LNF2_9RHOB5.850e-6859.78Glycerophosphodiester phosphodiesterase family pro... [more]
A0A3S2WJS7_9RHOB4.500e-5552.81Glycerophosphodiester phosphodiesterase family pro... [more]
A0A432Z3I6_9GAMM7.560e-2737.71GP-PDE domain-containing protein n=2 Tax=Pseudidio... [more]
A0A846C729_9CYAN2.460e-2235.03DUF839 domain-containing protein n=1 Tax=Okeania s... [more]
A0A3S5BHP2_9ALTE3.520e-2237.06Glycerophosphoryl diester phosphodiesterase n=2 Ta... [more]
A0A2T3NPS4_9GAMM1.910e-2134.64Glycerophosphodiester phosphodiesterase n=1 Tax=Ph... [more]
A0A3F2U0F2_9HYPH2.120e-2133.52Glycerophosphodiester phosphodiesterase n=1 Tax=Me... [more]
A0A562CD79_9HYPH3.510e-2134.62Glycerophosphoryl diester phosphodiesterase n=1 Ta... [more]
UPI000ABD03961.400e-2032.79glycerophosphodiester phosphodiesterase family pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032160Domain of unknown function DUF4996PFAMPF16387DUF4996coord: 105..171
e-value: 9.1E-8
score: 32.5
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyGENE3D3.20.20.190coord: 1..178
e-value: 2.3E-11
score: 46.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104931contigM-pyrifera_M_contig104931:2..550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104931.1056.1mRNA_M-pyrifera_M_contig104931.1056.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104931 2..550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104931.1056.1 ID=prot_M-pyrifera_M_contig104931.1056.1|Name=mRNA_M-pyrifera_M_contig104931.1056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLV
DSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLF
SIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIAPDSVYSF
WIAHGASVIQTDEPEFAIDWLTQSGFRMDLGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032160DUF4996
IPR017946PLC-like_Pdiesterase_TIM-brl