mRNA_M-pyrifera_M_contig104931.1056.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: UPI001C08AF4F (glycerophosphodiester phosphodiesterase family protein n=1 Tax=Pacificibacter marinus TaxID=658057 RepID=UPI001C08AF4F) HSP 1 Score: 258 bits (660), Expect = 1.160e-83 Identity = 120/179 (67.04%), Postives = 145/179 (81.01%), Query Frame = 1 Query: 1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRMD 537 IP++A +A AGV+ QVTVKTNA A ++ V +IL + PIDF+P+L+D DG+D L +CE +SCVECVVE P+GP GF DRLG T DGG LFSI+ARR+A++HN RQFINTLYVDPAIP TQWNGGRNCQLARI+PDSVYSFWIAHGASVIQTDEPEF ++WL Q+GFR++ Sbjct: 137 IPDIAKIAHDAGVTEQVTVKTNARGAAQIAKVGDILAGLTHPIDFIPILIDQIDGIDALQTVCEDLPISCVECVVELPLGPKGFVGLDRLGITPDGGSLFSIDARRIAEAHNVRQFINTLYVDPAIPGTQWNGGRNCQLARISPDSVYSFWIAHGASVIQTDEPEFLLEWLRQNGFRLE 315
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A6L7LNF2_9RHOB (Glycerophosphodiester phosphodiesterase family protein n=3 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7LNF2_9RHOB) HSP 1 Score: 219 bits (557), Expect = 5.850e-68 Identity = 107/179 (59.78%), Postives = 132/179 (73.74%), Query Frame = 1 Query: 1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVG-PGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDT-QWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 531 IP +A +A AGVS Q+TVK+N ATR E VAEI+ RT P+DF+PVLVDSRDGL+ + A CE+ + +CVEC+V+ G G+ R G T DGGPLFS+EARR+A N R F+NTL+V+P I QWNGGR+C+L RIAPDSVY FWIAHGA+VIQTD+P F +DWL SGFR Sbjct: 147 IPEIARIAADAGVSGQLTVKSNLGDATRFERVAEIISRTPHPVDFIPVLVDSRDGLEGMRAACEVLSPNCVECIVDYGFGRDAGYNLLARRGMTIDGGPLFSLEARRIAAGRNLRLFVNTLFVNPHISGHHQWNGGRSCELGRIAPDSVYGFWIAHGATVIQTDDPPFVLDWLKASGFR 325
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A3S2WJS7_9RHOB (Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Rhodobacteraceae bacterium CCMM004 TaxID=2499834 RepID=A0A3S2WJS7_9RHOB) HSP 1 Score: 186 bits (471), Expect = 4.500e-55 Identity = 94/178 (52.81%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDT-QWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 531 I +VA +A GV+ QVT+KTN T V+ + P+D +PV+VDSRDGLD C CVECVV+ P G GG+ R G T DGG LFS ARRLA N R F+NTLYV P QWNGGR+C+L R APDSVY FWIAHGA+VIQTDE F +DWL ++GF Sbjct: 142 IGDVAGLADRCGVADQVTIKTNLKDGTDYAEVSRRIAACPGPVDLIPVIVDSRDGLDGFERACRTLAPRCVECVVDYPFGDGGYNLLARRGLTMDGGVLFSPRARRLAAEMNIRLFVNTLYVTPVDNGLHQWNGGRDCELGRAAPDSVYGFWIAHGATVIQTDEAAFVLDWLRRAGFH 319
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A432Z3I6_9GAMM (GP-PDE domain-containing protein n=2 Tax=Pseudidiomarina sediminum TaxID=431675 RepID=A0A432Z3I6_9GAMM) HSP 1 Score: 113 bits (282), Expect = 7.560e-27 Identity = 66/175 (37.71%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 19 VARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSRDG-LDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAI--PD-TQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 531 +A+A GV Q+ +K AD +L + ++ S P+DF+P+ D L L E E VV G P ++ T DGG LFS +RLA+ ++ ++NTLYVDP + P+ QWNGGR+ L PD V+ FW GA+++QTDEP+F +D+L Q G R Sbjct: 163 IAKAQGVEQQIILKEVADTPAQLTAIETLMAELSYPVDFMPMHWDKNGASLQQLRNSFERIQPQAAEMVV-------GLPQQAKVARTPDGGVLFSPAVKRLAKEYDVHLWVNTLYVDPLLGKPEYLQWNGGRHDVLGLKYPDQVFGFWAEQGATIMQTDEPKFLLDYLKQRGLR 330
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A846C729_9CYAN (DUF839 domain-containing protein n=1 Tax=Okeania sp. SIO2F4 TaxID=2607790 RepID=A0A846C729_9CYAN) HSP 1 Score: 103 bits (257), Expect = 2.460e-22 Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 1 Query: 7 NVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSR-DGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQW-NGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 531 NV +AR GV Q+ +K + + V E L + P++F+P++ D+ + + + E F + E +V P D T DGG LFS E + +A+ ++ R +INTL+ +P I D + NG RN LA PD V+ FW+ GAS++QTDEP A+D+L +G R Sbjct: 938 NVMNIARDMGVDEQIVIKNPVNNEEQFAAVQETLSQLPFPVEFMPIIDDNLVSNSEFIVKVFEEFQPNAAEMLVR--------PQGDSQELTEDGGFLFSEEVQAIAEEYDVRLWINTLFANPEISDNGFINGFRNDVLALTEPDEVFGFWVDAGASILQTDEPLLAVDYLNDNGER 1106
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A3S5BHP2_9ALTE (Glycerophosphoryl diester phosphodiesterase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A3S5BHP2_9ALTE) HSP 1 Score: 100 bits (250), Expect = 3.520e-22 Identity = 63/170 (37.06%), Postives = 88/170 (51.76%), Query Frame = 1 Query: 19 VARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSR-DGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGY-TADGGPLFSIEARRLAQSHNFRQFINTLYVDPA---IPDTQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWL 513 +A GV + +K AD + + + E++ +DF+P+L D + D + A S VE VV G P +D Y T DGG LFS + R L Q N ++NTLY+D + QWNGGR+ L P V+ FWI HGA++IQTDEP+F I +L Sbjct: 164 IANKMGVLDHIILKGKADTPEQRKAIDELMASLPFTVDFMPMLRDKKISSFDDIKATYTQLNPSAVEMVV-------GIPDYDDGRYLTKDGGILFSAKTRALNQQFNSHLWMNTLYIDALRGRLDALQWNGGRHDILGLKYPSQVFDFWIDHGATIIQTDEPKFLIQYL 326
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A2T3NPS4_9GAMM (Glycerophosphodiester phosphodiesterase n=1 Tax=Photobacterium sanctipauli TaxID=1342794 RepID=A0A2T3NPS4_9GAMM) HSP 1 Score: 99.0 bits (245), Expect = 1.910e-21 Identity = 62/179 (34.64%), Postives = 93/179 (51.96%), Query Frame = 1 Query: 4 PNVAAVARAAGVSHQVTVKTNA-DRATRLEHVAEILDRTSDPIDFVPVLVDSRDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIA--PDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFR 531 P + +A+ AGV HQ+ N D R + +F+P L DS LD ++ E FT + ++ + + P G T DGG LFS E+R+LA+ +N +INTLY + + +GGR ++A A P VY FW+ G ++ QTDEPEFA+ WL ++G+R Sbjct: 170 PEMFELAKQAGVEHQILATINQNDEEQRKAATKMVASLEGSKANFLPNLYDSHVDLDVVNRSLEEFTPAAIQ--LRNYHAPDGK-------ITMDGGVLFSAESRKLAEKYNTHMWINTLYTYREMAGMR-SGGRGDEMAVYANLPSEVYGFWVDKGVTIFQTDEPEFAMKWLQENGYR 338
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A3F2U0F2_9HYPH (Glycerophosphodiester phosphodiesterase n=1 Tax=Mesorhizobium sp. YM1C-6-2 TaxID=1827501 RepID=A0A3F2U0F2_9HYPH) HSP 1 Score: 99.0 bits (245), Expect = 2.120e-21 Identity = 61/182 (33.52%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDS--RDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIA--PDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRM 534 +P + AVA G++ ++ +K+N A++++ + +L RT+ + F+P++ D RD + L A F VE + GG P T +GGPLF AR +A ++ ++NT Y P +GGR QLA +A P Y FW+ GA++IQTDEP AI+WL + +R+ Sbjct: 164 LPEIVAVAERMGMADEIIIKSNLWSASKVDEMKRLLQRTAPGVVFMPIIADDAVRDA-EFLEAATSAFAADAVELIAWHR---GGEPM------TENGGPLFGARARAVAARGDWHLWVNT-YAIVNKPAGMLSGGRGDQLATVASMPGEAYGFWVDRGATIIQTDEPRAAIEWLEANDYRV 334
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: A0A562CD79_9HYPH (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Mesorhizobium sp. J18 TaxID=935263 RepID=A0A562CD79_9HYPH) HSP 1 Score: 98.2 bits (243), Expect = 3.510e-21 Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = 1 Query: 10 VAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDS--RDGLDTLHALCEMFTLSCVECVVESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIA--PDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRMDLG 543 +AAVAR +GV +V +K N A ++ + ++ R D I F+P++ D +D HA F VE + G G T DGG LF AR +A ++ ++NT+ ++ P +GGR Q+A A P+ +Y FW GA++IQTDEP AI+WL Q+G+R+ G Sbjct: 165 IAAVARESGVESEVVIKQNLWNAEKVAEMRRVMARIGDGIRFMPIMADDAVKDVAFLEHAT-RPFGPDAVEMITWHRKGTG---------MTDDGGLLFGARARAVAARGDWHLWVNTIAIE-GQPMGPMSGGRGDQMAVSAGMPEEIYGFWAEEGATMIQTDEPALAIEWLEQNGYRVPYG 335
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Match: UPI000ABD0396 (glycerophosphodiester phosphodiesterase family protein n=1 Tax=Rhizobium arenae TaxID=1856850 RepID=UPI000ABD0396) HSP 1 Score: 96.7 bits (239), Expect = 1.400e-20 Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = 1 Query: 1 IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVDSR-DGLDTLHALCEMFTLSCVECV----VESPVGPGGFPAFDRLGYTADGGPLFSIEARRLAQSHNFRQFINTLYVDPAIPDTQWNGGRNCQLARIAPDSVYSFWIAHGASVIQTDEPEFAIDWLTQSGFRM 534 +P+VAA ARA G +HQ+ +K N A R+E +++ D + F+P++ D D + F+ E + E P+ T GGPLFS +A A + N+ + NT Y P GGR +LA P+ Y FWI G +++QTDEP+ AI WL +G+R+ Sbjct: 169 LPDVAAEARAVGTAHQIVMKENLWSAKRIEEARAVMNTVGDDVIFMPIIADDAIDNAAFMGRATAAFSAPAAELINWRRQEGPL-------------TDKGGPLFSAKAHAAAIAGNWHMWANT-YPIVNRPPGMLAGGRGDELAMRDPEESYGFWIDRGVTILQTDEPKAAIQWLEANGYRI 337 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104931.1056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104931.1056.1 >prot_M-pyrifera_M_contig104931.1056.1 ID=prot_M-pyrifera_M_contig104931.1056.1|Name=mRNA_M-pyrifera_M_contig104931.1056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp IPNVAAVARAAGVSHQVTVKTNADRATRLEHVAEILDRTSDPIDFVPVLVback to top mRNA from alignment at M-pyrifera_M_contig104931:2..550+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104931.1056.1 ID=mRNA_M-pyrifera_M_contig104931.1056.1|Name=mRNA_M-pyrifera_M_contig104931.1056.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig104931:2..550+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104931:2..550+ >mRNA_M-pyrifera_M_contig104931.1056.1 ID=mRNA_M-pyrifera_M_contig104931.1056.1|Name=mRNA_M-pyrifera_M_contig104931.1056.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig104931:2..550+ (Macrocystis pyrifera P11B4 male)back to top |