prot_M-pyrifera_M_contig104926.1052.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104926.1052.1
Unique Nameprot_M-pyrifera_M_contig104926.1052.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length213
Homology
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Match: A0A838T898_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=A0A838T898_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 5.920e-6
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0
Query:  141 FYTMINNGDGTFGSPLATNTFD--GPSAVDAGDLDNDGDVDLVLSS--------NTDYNIYVYKNNGDGTF 201
            F+T INNGDGTFG P  T + +  G S +DA D+DNDGD+D VL+         N+   I++ KNNG GTF
Sbjct:  497 FHTAINNGDGTFG-PRQTWSMNACGWSDIDAFDMDNDGDLDAVLTEWLGCTNDPNSARRIFISKNNGSGTF 566          
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Match: A0A820Q676_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820Q676_9BILA)

HSP 1 Score: 52.8 bits (125), Expect = 1.750e-5
Identity = 27/77 (35.06%), Postives = 44/77 (57.14%), Query Frame = 0
Query:  133 VAIDEYSKFYTMINNGDGTF--GSPLATNTFDGPSAVDAGDLDNDGDVDLVLSSNTDYNIYVYKNNGDGTFSNHQGY 207
            + +D  S     +  G+GTF  GS  +T +   P ++  GDL+ND  +D+V+++    N+ V+   GDGTFSN + Y
Sbjct:   44 ITVDYSSNILIFLGYGNGTFVKGSTYSTGSGSRPLSITVGDLNNDNQLDIVVTNCLTDNVVVFSGEGDGTFSNQRTY 120          
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Match: UPI00082D0A19 (T9SS type A sorting domain-containing protein n=1 Tax=Tamlana agarivorans TaxID=481183 RepID=UPI00082D0A19)

HSP 1 Score: 55.5 bits (132), Expect = 1.940e-5
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0
Query:  135 IDEYSKFYTMINNGDGTFG--SPLATNTFDG-PSAVDAGDLDNDGDVDLVLSSNTDYNIYVYKNNGDGTFSN 203
            ID  +K   + NNGD TFG  S    NT+   P+   AGD+D DGD+D+++SS     IY+ KN+G G F+N
Sbjct:  510 IDRINKIAWIKNNGDLTFGDLSVFTDNTYGFIPNKYTAGDIDRDGDIDIIVSSKNYSRIYLLKNDGLGNFTN 581          
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Match: A0A356KWZ5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KWZ5_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 3.480e-5
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0
Query:  138 YSKFYTMINNGDGTFGSPLATNTFDGPSAVDAGDLDNDGDVDLVLSSNTDYNIYVYKNNGDGTFSNH 204
            + K Y  +N+G G FGS +  + F G    D GDLD DGD DLVL+ ++ +  YV  N+G GT ++H
Sbjct:  549 FKKLYVSLNDGTGVFGSFVGIHNF-GHLFADQGDLDGDGDTDLVLAGSSSF--YVLMNDGGGTLTHH 612          
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Match: U5QK37_9CYAN (Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QK37_9CYAN)

HSP 1 Score: 53.9 bits (128), Expect = 6.320e-5
Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 0
Query:  133 VAIDEYSKFYTMINNGDGTFGSPLATNTFDGPSAVDAGDLDNDGDVDLVLS 183
            V +   S    ++N GDGTF +P   +T DG S++ AGDLD DGDVDLV S
Sbjct:  637 VTVSNGSIVSVLLNRGDGTFDAPAIFHTIDGNSSISAGDLDGDGDVDLVTS 687          
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Match: A0A1G1TID1_9BACT (Uncharacterized protein n=1 Tax=Hymenobacter coccineus TaxID=1908235 RepID=A0A1G1TID1_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 6.900e-5
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 0
Query:  145 INNGDGTFGSPLATNTFDGPSAVDAGDLDNDGDVDLVLSS---NTDYNIYVYKNNGDGTFSNHQGYENLG 211
            +N+G GTFGSP A      P+++  GD+DNDGD+DLV+ +   NT   + V  N+G+GTF + Q Y   G
Sbjct:  187 LNDGRGTFGSPRAVEVGISPTSLALGDMDNDGDLDLVVGAGIQNTSA-LNVALNDGEGTFGSPQSYSIFG 255          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104926.1052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A838T898_9BACT5.920e-649.30T9SS type A sorting domain-containing protein n=1 ... [more]
A0A820Q676_9BILA1.750e-535.06Hypothetical protein (Fragment) n=1 Tax=Adineta st... [more]
UPI00082D0A191.940e-544.44T9SS type A sorting domain-containing protein n=1 ... [more]
A0A356KWZ5_9BACT3.480e-543.28Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
U5QK37_9CYAN6.320e-550.98Uncharacterized protein n=1 Tax=Gloeobacter kilaue... [more]
A0A1G1TID1_9BACT6.900e-544.29Uncharacterized protein n=1 Tax=Hymenobacter cocci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13517VCBScoord: 123..181
e-value: 5.7E-12
score: 46.0
coord: 25..85
e-value: 4.7E-11
score: 43.1
NoneNo IPR availablePANTHERPTHR46580FAMILY NOT NAMEDcoord: 5..206
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 12..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104926contigM-pyrifera_M_contig104926:2..640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104926.1052.1mRNA_M-pyrifera_M_contig104926.1052.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104926 2..640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104926.1052.1 ID=prot_M-pyrifera_M_contig104926.1052.1|Name=mRNA_M-pyrifera_M_contig104926.1052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
DSDSTYATKVNLSVGDSPTNFTIADLDGDGDEDMIMSDNDSYYVKVLYND
GEGSFDSGTNFSLNDYSYTVTAGDLDHDGDLDIVVGISDNVSVLLNDGTG
VLSAPADYSIGTVQNVIDVVTTDINGDGELDIVAIDEYSKFYTMINNGDG
TFGSPLATNTFDGPSAVDAGDLDNDGDVDLVLSSNTDYNIYVYKNNGDGT
FSNHQGYENLGYF
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