prot_M-pyrifera_M_contig104857.1044.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104857.1044.1
Unique Nameprot_M-pyrifera_M_contig104857.1044.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104857.1044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 2..60
e-value: 8.7E-8
score: 31.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..75
e-value: 7.3E-12
score: 46.9
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104857contigM-pyrifera_M_contig104857:405..635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104857.1044.1mRNA_M-pyrifera_M_contig104857.1044.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104857 405..635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104857.1044.1 ID=prot_M-pyrifera_M_contig104857.1044.1|Name=mRNA_M-pyrifera_M_contig104857.1044.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
SSLNIENISVNGLVGEHTGDVAISILCSDKTPCKNIEIANVHLTAAPGKK
NEFQCQNACGTASNTSPPSCLSKCEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence