prot_M-pyrifera_M_contig10471.1012.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10471.1012.1
Unique Nameprot_M-pyrifera_M_contig10471.1012.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length182
Homology
BLAST of mRNA_M-pyrifera_M_contig10471.1012.1 vs. uniprot
Match: D7FUI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI3_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 3.520e-43
Identity = 108/204 (52.94%), Postives = 122/204 (59.80%), Query Frame = 0
Query:    1 MDDSDDPE--DAEIYASLRRRLEELEK-IPPSRPLPSPTAFPSPRLSPQTAITSFARTNRSPRARE-FTIGDAFKADSGPVSAEDKKRSLAWLTIKSVGVISAALSFGTVALYWLAGEYFVHLGPREYPGS------ASRSAGVERTVEGK-GEGEAAAAP---RRTIGGSTTRDAFSFEGFPDAGRSD---------VVPPDF 181
            MD SDD    DAE+YASLR+RLEELEK +  S P P            Q    + A  N+  R RE FTI           S EDK+RS A LTI+SVGVISAALSFGT+ALYWLAG  FVHLGPREYPGS      AS + G+ER   G+ G G A  AP   RR +GGS+TR+AF FEGFPD G S          VVPPDF
Sbjct:    1 MDPSDDTSEGDAEMYASLRKRLEELEKQVGTSAPAPQE----------QVQEPAVAANNKGAREREWFTIPKE--------SPEDKRRSRALLTIQSVGVISAALSFGTLALYWLAGAAFVHLGPREYPGSMSSRGGASTAPGIERIAAGEDGNGGAQQAPQTKRRAMGGSSTREAFQFEGFPDVGGSGGGSGGVGKGVVPPDF 186          
BLAST of mRNA_M-pyrifera_M_contig10471.1012.1 vs. uniprot
Match: A0A6H5KW30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW30_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.270e-38
Identity = 107/206 (51.94%), Postives = 122/206 (59.22%), Query Frame = 0
Query:    1 MDDSDDPE--DAEIYASLRRRLEELE-KIPPSRPLPSPTAFPSPRLSPQTAITSFARTNRSPRARE-FTIGDAFKADSGPVSA-EDKKRSLAWLTIKSVGVISAALSFGTVALYWLAGEYFVHLGPREYPGSASR------SAGVERTVEGKGE-GEAAAAPR---RTIGGSTTRDAFSFEGFPDAG----------RSDVVPPDF 181
            MD SDD    DAE+YASLR+RLEELE ++  S P         P      A+T+    NR  R RE FTI         P  A EDK+RSLA LTI+SVGVISAALSFGT+ALYWLAG  FVHLGPREYPGS S       + G ER V G+ E G A   P+   R +GGS+TR+AF FEGFPD G             VVPPDF
Sbjct:   77 MDPSDDTSEGDAEMYASLRKRLEELENRVETSAPAAQEEQGQEP------AVTA---NNRGAREREWFTI---------PKEAPEDKRRSLALLTIQSVGVISAALSFGTLALYWLAGAAFVHLGPREYPGSVSSRGSAGTAPGFERIVVGEDENGGAQQVPQTQGRAMGGSSTREAFQFEGFPDVGGGGSXXXXXXXKGVVPPDF 264          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10471.1012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUI3_ECTSI3.520e-4352.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW30_9PHAE1.270e-3851.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..181
NoneNo IPR availableTMHMMTMhelixcoord: 91..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10471contigM-pyrifera_M_contig10471:4356..6730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10471.1012.1mRNA_M-pyrifera_M_contig10471.1012.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10471 4356..6730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10471.1012.1 ID=prot_M-pyrifera_M_contig10471.1012.1|Name=mRNA_M-pyrifera_M_contig10471.1012.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MDDSDDPEDAEIYASLRRRLEELEKIPPSRPLPSPTAFPSPRLSPQTAIT
SFARTNRSPRAREFTIGDAFKADSGPVSAEDKKRSLAWLTIKSVGVISAA
LSFGTVALYWLAGEYFVHLGPREYPGSASRSAGVERTVEGKGEGEAAAAP
RRTIGGSTTRDAFSFEGFPDAGRSDVVPPDF*
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