prot_M-pyrifera_M_contig104707.1011.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104707.1011.1
Unique Nameprot_M-pyrifera_M_contig104707.1011.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length157
Homology
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BLAST of mRNA_M-pyrifera_M_contig104707.1011.1 vs. uniprot
Match: A0A3D4UFN8_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UFN8_9BACT)

HSP 1 Score: 152 bits (383), Expect = 1.660e-43
Identity = 77/154 (50.00%), Postives = 102/154 (66.23%), Query Frame = 0 
Query:    1 VGAVIFAVGCGSGLLVGWFAGMANSFSDMLSDMDFD-AKVIVEAAAPDVVIADEPFSVTVTVTDTSGIDRILHEIDFMGTLADNAQFANIHPVPTSIVPYPGYKEFYFEEPLQANQSAQFSFEITPAQAGIYNADITVYMEDFNSESTEISITV 153
            +GA+IFAVGCGSGLLVGWF G A+ F+D + DM F+ A + +   AP      +P +VT+TV+D +   R + +ID+ GT+ DN  F  I+PVP    P   Y+E  FE PL A+QS  F+F +TP Q G YNA ITVY++D+NSE TEI I V
Sbjct:   35 IGALIFAVGCGSGLLVGWFGGAASGFADAIPDMTFEPANITITTDAPQTAAVGQPITVTLTVSDINSTQRTIRDIDWSGTIVDNMDFGTINPVPQEQNPDGDYREIVFETPLGADQSQDFTFILTPRQVGTYNAAITVYVDDYNSERTEILIDV 188
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104707.1011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3D4UFN8_9BACT1.660e-4350.00Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104707contigM-pyrifera_M_contig104707:2..472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104707.1011.1mRNA_M-pyrifera_M_contig104707.1011.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104707 2..472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104707.1011.1 ID=prot_M-pyrifera_M_contig104707.1011.1|Name=mRNA_M-pyrifera_M_contig104707.1011.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
VGAVIFAVGCGSGLLVGWFAGMANSFSDMLSDMDFDAKVIVEAAAPDVVI
ADEPFSVTVTVTDTSGIDRILHEIDFMGTLADNAQFANIHPVPTSIVPYP
GYKEFYFEEPLQANQSAQFSFEITPAQAGIYNADITVYMEDFNSESTEIS
ITVAPN*
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