prot_M-pyrifera_M_contig103967.842.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103967.842.1
Unique Nameprot_M-pyrifera_M_contig103967.842.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
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BLAST of mRNA_M-pyrifera_M_contig103967.842.1 vs. uniprot
Match: A0A1Y1HXU4_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXU4_KLENI)

HSP 1 Score: 83.2 bits (204), Expect = 5.230e-15
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:  104 RCTTSSEPGRWLGILDKTTPCEPPVCSGDRVQSMVTAQSWMGAIYDYVWVPYNCYFHLYSPNDISYCAREAGISWIHVMGDSLSREMEAYLASV 197
            RC    +PGRWL  L     C PP CSG+R  + V  + W G    +V+ P+ C +H++S  DI+ CA E G+ W+HV+GDS  RE+ + L S+
Sbjct:  893 RCVEGDKPGRWLN-LPVAENCRPPFCSGNRSATNVVKE-WNGNDIPWVYAPFGCQYHMFSLGDITTCAGETGVKWVHVVGDSTVREIPSTLFSM 984
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103967.842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1Y1HXU4_KLENI5.230e-1541.49Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103967contigM-pyrifera_M_contig103967:3..608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103967.842.1mRNA_M-pyrifera_M_contig103967.842.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103967 3..608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103967.842.1 ID=prot_M-pyrifera_M_contig103967.842.1|Name=mRNA_M-pyrifera_M_contig103967.842.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
LLSHDVIQSAPVSSHWNREWGGYELDVTIRDVGMYKLRVTLNEIWGSSEP
LSSEPAPICVSSHLRHEFADCDLDRSLVHGSGVSVYVRQVQGEVPIFHRS
HPKRCTTSSEPGRWLGILDKTTPCEPPVCSGDRVQSMVTAQSWMGAIYDY
VWVPYNCYFHLYSPNDISYCAREAGISWIHVMGDSLSREMEAYLASVFHV
ED
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