prot_M-pyrifera_M_contig103822.814.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig103822.814.1
Unique Name	prot_M-pyrifera_M_contig103822.814.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	118

Homology

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BLAST of mRNA_M-pyrifera_M_contig103822.814.1 vs. uniprot
Match: A0A7Y2IJ16_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJ16_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 2.570e-9
Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 0

Query:    9 VLSSACGEDEFPPQVKQDAEIYEAALNHLVEVSGVELADNWVDPVVFVEVLDTTEVDLETQVAVIDEMDEAFAIRFVDDLGEAIDIELDDLPVREGTILIAFGPI 113
            VL +AC     P    +DA  Y A ++ L++ S ++  D    PV++VE      + L  QV ++    + + +RFVDD GEA+ ++L+  PVR  + LI  GPI
Sbjct:   25 VLVTACSSQPKPETTDRDASAYAAVIDALLQGSPLDQEDPDRLPVIYVEAFAQEGISLTVQVQLVTAYADTYQLRFVDDRGEALLVDLEKQPVRSSSALIGLGPI 129

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig103822.814.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig103822.814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A7Y2IJ16_9ACTN	2.570e-9	34.29	Uncharacterized protein n=1 Tax=Acidimicrobiales b...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 16..118
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 11..15
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..15 score: 0.693

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig103822	contig	M-pyrifera_M_contig103822:124..477 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig103822.814.1	mRNA_M-pyrifera_M_contig103822.814.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig103822 124..477 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig103822.814.1 ID=prot_M-pyrifera_M_contig103822.814.1|Name=mRNA_M-pyrifera_M_contig103822.814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
LLAFALISVLSSACGEDEFPPQVKQDAEIYEAALNHLVEVSGVELADNWV
DPVVFVEVLDTTEVDLETQVAVIDEMDEAFAIRFVDDLGEAIDIELDDLP
VREGTILIAFGPIEVDGA