prot_M-pyrifera_M_contig103822.814.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103822.814.1
Unique Nameprot_M-pyrifera_M_contig103822.814.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
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BLAST of mRNA_M-pyrifera_M_contig103822.814.1 vs. uniprot
Match: A0A7Y2IJ16_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJ16_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 2.570e-9
Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 0 
Query:    9 VLSSACGEDEFPPQVKQDAEIYEAALNHLVEVSGVELADNWVDPVVFVEVLDTTEVDLETQVAVIDEMDEAFAIRFVDDLGEAIDIELDDLPVREGTILIAFGPI 113
            VL +AC     P    +DA  Y A ++ L++ S ++  D    PV++VE      + L  QV ++    + + +RFVDD GEA+ ++L+  PVR  + LI  GPI
Sbjct:   25 VLVTACSSQPKPETTDRDASAYAAVIDALLQGSPLDQEDPDRLPVIYVEAFAQEGISLTVQVQLVTAYADTYQLRFVDDRGEALLVDLEKQPVRSSSALIGLGPI 129
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103822.814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7Y2IJ16_9ACTN2.570e-934.29Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.693

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103822contigM-pyrifera_M_contig103822:124..477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103822.814.1mRNA_M-pyrifera_M_contig103822.814.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103822 124..477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103822.814.1 ID=prot_M-pyrifera_M_contig103822.814.1|Name=mRNA_M-pyrifera_M_contig103822.814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
LLAFALISVLSSACGEDEFPPQVKQDAEIYEAALNHLVEVSGVELADNWV
DPVVFVEVLDTTEVDLETQVAVIDEMDEAFAIRFVDDLGEAIDIELDDLP
VREGTILIAFGPIEVDGA
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