prot_M-pyrifera_M_contig103501.744.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103501.744.1
Unique Nameprot_M-pyrifera_M_contig103501.744.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig103501.744.1 vs. uniprot
Match: UPI0004C00D9C (hypothetical protein n=1 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI0004C00D9C)

HSP 1 Score: 54.7 bits (130), Expect = 8.660e-7
Identity = 36/121 (29.75%), Postives = 60/121 (49.59%), Query Frame = 0 
Query:    1 VSFDLYFLPRPTGGPFDHTAAAERRRHTDATSNSDLVI--WDRIGHRLEIEMPTMESSPIDG-GRSYADAEVGVELLLTPGEIALSAPHDLAGVTVGDVIDMLRRAAAIVETVTGLVAYDP 118
            +S+D+YFL R  G P+D    A      D+   S  ++  W+RI  + +  +  +E +  +   R  + +  G++L +   E+++S P+   G     V   +   AAIVE  TGL AYDP
Sbjct:    1 MSYDIYFLNRRDGQPWDEVLKALEDEVGDSRPVSAHLLGAWERIVPQAQALLGEVEITEYEQESRDLSHSGTGIDLSVFGDEVSISVPYWHTGDDAAAVFGQVSALAAIVEKETGLTAYDP 121
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103501.744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0004C00D9C8.660e-729.75hypothetical protein n=1 Tax=unclassified Streptom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103501contigM-pyrifera_M_contig103501:128..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103501.744.1mRNA_M-pyrifera_M_contig103501.744.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103501 128..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103501.744.1 ID=prot_M-pyrifera_M_contig103501.744.1|Name=mRNA_M-pyrifera_M_contig103501.744.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
VSFDLYFLPRPTGGPFDHTAAAERRRHTDATSNSDLVIWDRIGHRLEIEM
PTMESSPIDGGRSYADAEVGVELLLTPGEIALSAPHDLAGVTVGDVIDML
RRAAAIVETVTGLVAYDPVADASFL
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