prot_M-pyrifera_M_contig102918.617.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102918.617.1
Unique Nameprot_M-pyrifera_M_contig102918.617.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length60
Homology
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A7I5E928_HAECO (Ubiquitin-fold modifier 1 n=2 Tax=Ecdysozoa TaxID=1206794 RepID=A0A7I5E928_HAECO)

HSP 1 Score: 86.3 bits (212), Expect = 1.240e-20
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    5 SSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            SSG KVTFKITLTSDPKLP++V  +SVPEA PF AVLK+AAEEFKVPAATSAIITN
Sbjct:    9 SSGSKVTFKITLTSDPKLPFKV--LSVPEATPFTAVLKFAAEEFKVPAATSAIITN 62          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A0N4XXI4_NIPBR (Ubiquitin-fold modifier 1 n=5 Tax=Strongylida TaxID=6308 RepID=A0A0N4XXI4_NIPBR)

HSP 1 Score: 85.1 bits (209), Expect = 3.110e-20
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    5 SSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            SSG KVTFKITLTSDPKLP++V  +SVPE+ PF AVLK+AAEEFKVPAATSAIITN
Sbjct:    9 SSGSKVTFKITLTSDPKLPFKV--LSVPESTPFTAVLKFAAEEFKVPAATSAIITN 62          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A5B8MXX3_9CHLO (Ubiquitin-fold modifier 1 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MXX3_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 8.890e-20
Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    4 RSSGP--KVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            RS+ P  KVTFKITLTSDPKLPYRV  +SVPE APF AVLKYAAEEFKVPA TSAIITN
Sbjct:    7 RSAKPWSKVTFKITLTSDPKLPYRV--LSVPEEAPFTAVLKYAAEEFKVPAQTSAIITN 63          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A183GJH7_HELPZ (Mitochondrial import receptor subunit TOM7 homolog n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GJH7_HELPZ)

HSP 1 Score: 85.1 bits (209), Expect = 1.380e-19
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    5 SSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            SSG KVTFKITLTSDPKLP++V  +SVPE+ PF AVLK+AAEEFKVPAATSAIITN
Sbjct:    9 SSGSKVTFKITLTSDPKLPFKV--LSVPESTPFTAVLKFAAEEFKVPAATSAIITN 62          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A0N5AZW3_9BILA (Ubiquitin-fold modifier 1 n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AZW3_9BILA)

HSP 1 Score: 83.2 bits (204), Expect = 1.610e-19
Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    5 SSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            + G KVTFKITLTSDPKLP++V  +SVPEA PF AVLK+AAEEFKVPAATSAIITN
Sbjct:    3 AQGGKVTFKITLTSDPKLPFKV--LSVPEATPFTAVLKFAAEEFKVPAATSAIITN 56          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A9TIT4_PHYPA (Ubiquitin-fold modifier 1 n=3 Tax=Embryophyta TaxID=3193 RepID=A9TIT4_PHYPA)

HSP 1 Score: 83.2 bits (204), Expect = 1.740e-19
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    3 DRSSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            ++ SG KV+FK+TLTSDPKLPY+V+  SVPE APFVAVLK+AAEEFKVP  TSAIITN
Sbjct:    4 EKESGGKVSFKVTLTSDPKLPYKVF--SVPEEAPFVAVLKFAAEEFKVPPQTSAIITN 59          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A2V0PP16_9CHLO (Ubiquitin-fold modifier 1 n=2 Tax=Chlorophyta TaxID=3041 RepID=A0A2V0PP16_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 1.940e-19
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    9 KVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            KVTFKITLTSDPKLPYRV+  SVPE APF AVLKYAAEEFKVPA TSAIITN
Sbjct:   15 KVTFKITLTSDPKLPYRVF--SVPEEAPFTAVLKYAAEEFKVPAQTSAIITN 64          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: UFM1_CAEEL (Ubiquitin-fold modifier 1 n=3 Tax=Caenorhabditis TaxID=6237 RepID=UFM1_CAEEL)

HSP 1 Score: 82.8 bits (203), Expect = 2.410e-19
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    5 SSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            ++G KVTFKITLTSDPKLP++V  +SVPE+ PF AVLK+AAEEFKVPAATSAIITN
Sbjct:    9 TAGSKVTFKITLTSDPKLPFKV--LSVPESTPFTAVLKFAAEEFKVPAATSAIITN 62          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: W2TCE6_NECAM (Mitochondrial import receptor subunit TOM7 homolog n=1 Tax=Necator americanus TaxID=51031 RepID=W2TCE6_NECAM)

HSP 1 Score: 85.1 bits (209), Expect = 3.400e-19
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    5 SSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            SSG KVTFKITLTSDPKLP++V  +SVPE+ PF AVLK+AAEEFKVPAATSAIITN
Sbjct:    9 SSGSKVTFKITLTSDPKLPFKV--LSVPESTPFTAVLKFAAEEFKVPAATSAIITN 62          
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Match: A0A7I4E6A6_PHYPA (Ubiquitin-fold modifier 1 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E6A6_PHYPA)

HSP 1 Score: 83.2 bits (204), Expect = 4.300e-19
Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 0
Query:    4 RSSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKVPAATSAIITN 60
            R SG KV+FK+TLTSDPKLPY+V+  SVPE APFVAVLK+AAEEFKVP  TSAIITN
Sbjct:   39 RRSGGKVSFKVTLTSDPKLPYKVF--SVPEEAPFVAVLKFAAEEFKVPPQTSAIITN 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102918.617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7I5E928_HAECO1.240e-2083.93Ubiquitin-fold modifier 1 n=2 Tax=Ecdysozoa TaxID=... [more]
A0A0N4XXI4_NIPBR3.110e-2082.14Ubiquitin-fold modifier 1 n=5 Tax=Strongylida TaxI... [more]
A0A5B8MXX3_9CHLO8.890e-2083.05Ubiquitin-fold modifier 1 n=1 Tax=Chloropicon prim... [more]
A0A183GJH7_HELPZ1.380e-1982.14Mitochondrial import receptor subunit TOM7 homolog... [more]
A0A0N5AZW3_9BILA1.610e-1980.36Ubiquitin-fold modifier 1 n=1 Tax=Syphacia muris T... [more]
A9TIT4_PHYPA1.740e-1975.86Ubiquitin-fold modifier 1 n=3 Tax=Embryophyta TaxI... [more]
A0A2V0PP16_9CHLO1.940e-1988.46Ubiquitin-fold modifier 1 n=2 Tax=Chlorophyta TaxI... [more]
UFM1_CAEEL2.410e-1978.57Ubiquitin-fold modifier 1 n=3 Tax=Caenorhabditis T... [more]
W2TCE6_NECAM3.400e-1982.14Mitochondrial import receptor subunit TOM7 homolog... [more]
A0A7I4E6A6_PHYPA4.300e-1978.95Ubiquitin-fold modifier 1 n=2 Tax=Physcomitrium pa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 2..60
e-value: 8.3E-24
score: 85.5
NoneNo IPR availablePANTHERPTHR15825:SF4coord: 5..60
IPR005375Ubiquitin-fold modifier 1PFAMPF03671Ufm1coord: 9..60
e-value: 3.2E-23
score: 81.6
IPR005375Ubiquitin-fold modifier 1PANTHERPTHR15825FAMILY NOT NAMEDcoord: 5..60
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 6..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102918contigM-pyrifera_M_contig102918:276..590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102918.617.1mRNA_M-pyrifera_M_contig102918.617.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102918 276..590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102918.617.1 ID=prot_M-pyrifera_M_contig102918.617.1|Name=mRNA_M-pyrifera_M_contig102918.617.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=60bp
LCDRSSGPKVTFKITLTSDPKLPYRVYVISVPEAAPFVAVLKYAAEEFKV
PAATSAIITN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005375UFM1
IPR029071Ubiquitin-like_domsf