prot_M-pyrifera_M_contig102706.584.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102706.584.1
Unique Nameprot_M-pyrifera_M_contig102706.584.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A2P6TCE0_CHLSO (DDB1- and CUL4-associated factor 13 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCE0_CHLSO)

HSP 1 Score: 100 bits (249), Expect = 9.320e-23
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    8 RDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            R +DHH    +  +AG   E+WD  RS  +H+FSW  A +ITSVR+ P+EP +FA T +DRGI L+D R+  P+RK+ M    N IAWNP E  +F
Sbjct:  164 RAIDHHWDRPQFATAGAAVEIWDHERSEPVHSFSWG-ADTITSVRFNPAEPDVFATTGSDRGIALYDLRSNTPIRKLVMQTKTNAIAWNPMEAFNF 258          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: E1ZQG8_CHLVA (DDB1- and CUL4-associated factor 13 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQG8_CHLVA)

HSP 1 Score: 94.7 bits (234), Expect = 8.430e-21
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0
Query:    8 RDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            R VDHH    +  +AG   EVWD  RS  +  FSW  A ++TSVR+ P+EP +FA   +DRG+ L+D R+  P+RK+ M    N +AWNP E  +F
Sbjct:  164 RSVDHHWGRAQFATAGAAVEVWDHERSEPVQTFSWG-ADTLTSVRFNPAEPDVFATAGSDRGVALYDLRSSTPIRKLVMQTRTNALAWNPMEAFNF 258          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH)

HSP 1 Score: 92.4 bits (228), Expect = 7.850e-20
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 0
Query:   10 VDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            +DHH    +  ++G    +WD  R+  ++ + W  A S+  VR+ P+E  L A+T NDR + L+D R+ +P+RK+ M MNANK+AWNPREP++F
Sbjct:  163 IDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWG-ADSVLCVRYNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNF 255          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A7S0S4L6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4L6_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 1.920e-19
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 0
Query:    8 RDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            R +DHH       +AG   ++WD  RS  ++ F+W  + +ITS R+ P+EP +FA T +DRG++L+D R   PVRK+ M   +N +AWNP E  +F
Sbjct:  165 RGIDHHWCRNTFATAGSVVDIWDHTRSEPINTFTWG-SDTITSARFNPAEPDVFATTGSDRGLVLYDLRISTPVRKLIMQTRSNALAWNPMEAFNF 259          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: E2BL45_HARSA (DDB1- and CUL4-associated factor 13 n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BL45_HARSA)

HSP 1 Score: 77.0 bits (188), Expect = 2.490e-14
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 0
Query:    6 VVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            V+  + HH       + G K  +W+  R+  +  F W    S+  V++ P +  L AA T++R IIL+DTR   P+RK+TM + +NK+AWNP E + F
Sbjct:  153 VLTGISHHRDKPIFATCGEKCHIWEQTRNEPVRTFEWG-VDSLYDVKFNPVQSNLLAACTSERRIILYDTRDTGPLRKITMKLRSNKLAWNPMESMTF 249          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A6P3Y5E9_DINQU (DDB1- and CUL4-associated factor 13 n=2 Tax=Ponerini TaxID=141711 RepID=A0A6P3Y5E9_DINQU)

HSP 1 Score: 77.0 bits (188), Expect = 2.490e-14
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    6 VVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            V+  + HH       + G K  +W+  R+  +  F WD   S+  +++ P +  L AA TN+R IIL+DTR + P+ ++TM + +NK+AWNP E + F
Sbjct:  154 VLTGITHHRDRPIFATCGEKCHIWEETRNEPVCTFEWD-VDSLYDIKFNPVQSNLLAACTNERRIILYDTRDKGPLTRITMKLRSNKLAWNPMESMSF 250          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: UPI001C9CBE4C (DDB1- and CUL4-associated factor 13 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CBE4C)

HSP 1 Score: 74.3 bits (181), Expect = 2.260e-13
Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    6 VVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            V+  + HH S     + G   ++W+  R+  +  F W    S+  V++ P +  L AA  ++R IIL+DTR   P+RKVT+ +  N++AWNP E   F
Sbjct:  158 VITGISHHRSANLFATCGELCQMWEESRNEPIRTFKWG-VDSLHDVKFNPVQTNLLAACASNRSIILYDTRDTGPLRKVTLKLRTNRLAWNPMEAFSF 254          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A7M5V1U1_9CNID (DDB1- and CUL4-associated factor 13 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V1U1_9CNID)

HSP 1 Score: 72.8 bits (177), Expect = 7.890e-13
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   10 VDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIA 94
            VDHH S ++  + G K ++WD  R+  +  + W    ++ S+++ P E  + +AT +DR IIL+DTR   P+RKVTM M +N +A
Sbjct:  158 VDHHWSKQQFATCGDKVDIWDISRATPIQTYDWG-IDTVESIKYNPVETHIVSATASDRSIILYDTRGSNPLRKVTMKMKSNAVA 241          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A7S2A1T2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1T2_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 2.060e-12
Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 0
Query:    1 WRSGGVVRDVDHHLSLERVVSAGVKAE-VWDWHRSAAL--HAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            WR+ G  + +DH  S +   +A   A  VW   RS+ +  H   W    ++   R+ PSE +L A  T DRG+ L DTRT   ++K  + M +N + WNP EP++F
Sbjct:  170 WRTPGSFKSIDHSRSEDLFATASDSAVCVWSPDRSSPVQSHEDLWGSDDTVNVARYNPSERSLLACCTADRGVGLFDTRTTSALKKTILAMRSNCLEWNPMEPMNF 275          
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A0H5R8Y5_9EUKA (Sof1 domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R8Y5_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 2.790e-12
Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   10 VDHHLSLERV-VSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 103
            +D H   + + V+ G + +VW   RS  LH+F W  A +++  R+   E  +  + ++DR + L+D R   P+RK+T+ M +N +AWNP E  +F
Sbjct:  167 IDAHWRDQSIAVTTGSQVDVWSLERSEPLHSFKWG-ADTVSCARYSRVECDVLGSCSSDRAVTLYDVRMRTPIRKITLQMQSNALAWNPMEAFNF 260          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2P6TCE0_CHLSO9.320e-2347.92DDB1- and CUL4-associated factor 13 n=1 Tax=Chlore... [more]
E1ZQG8_CHLVA8.430e-2144.79DDB1- and CUL4-associated factor 13 n=1 Tax=Chlore... [more]
A0A482SJF6_9ARCH7.850e-2042.55Sof1 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S0S4L6_9CHLO1.920e-1941.67Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
E2BL45_HARSA2.490e-1436.73DDB1- and CUL4-associated factor 13 n=2 Tax=Harpeg... [more]
A0A6P3Y5E9_DINQU2.490e-1435.71DDB1- and CUL4-associated factor 13 n=2 Tax=Poneri... [more]
UPI001C9CBE4C2.260e-1334.69DDB1- and CUL4-associated factor 13 n=1 Tax=Ventur... [more]
A0A7M5V1U1_9CNID7.890e-1338.82DDB1- and CUL4-associated factor 13 n=1 Tax=Clytia... [more]
A0A7S2A1T2_TRICV2.060e-1235.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A0H5R8Y5_9EUKA2.790e-1233.68Sof1 domain-containing protein (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..103
e-value: 5.9E-10
score: 40.6
NoneNo IPR availablePANTHERPTHR22851U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINcoord: 6..103
NoneNo IPR availablePANTHERPTHR22851:SF0DDB1- AND CUL4-ASSOCIATED FACTOR 13coord: 6..103
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102706contigM-pyrifera_M_contig102706:87..395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102706.584.1mRNA_M-pyrifera_M_contig102706.584.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102706 87..395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102706.584.1 ID=prot_M-pyrifera_M_contig102706.584.1|Name=mRNA_M-pyrifera_M_contig102706.584.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
WRSGGVVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITS
VRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREP
IHF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf