mRNA_M-pyrifera_M_contig102706.584.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A2P6TCE0_CHLSO (DDB1- and CUL4-associated factor 13 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCE0_CHLSO) HSP 1 Score: 100 bits (249), Expect = 9.320e-23 Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 22 RDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 R +DHH + +AG E+WD RS +H+FSW A +ITSVR+ P+EP +FA T +DRGI L+D R+ P+RK+ M N IAWNP E +F Sbjct: 164 RAIDHHWDRPQFATAGAAVEIWDHERSEPVHSFSWG-ADTITSVRFNPAEPDVFATTGSDRGIALYDLRSNTPIRKLVMQTKTNAIAWNPMEAFNF 258
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: E1ZQG8_CHLVA (DDB1- and CUL4-associated factor 13 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQG8_CHLVA) HSP 1 Score: 94.7 bits (234), Expect = 8.430e-21 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 22 RDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 R VDHH + +AG EVWD RS + FSW A ++TSVR+ P+EP +FA +DRG+ L+D R+ P+RK+ M N +AWNP E +F Sbjct: 164 RSVDHHWGRAQFATAGAAVEVWDHERSEPVQTFSWG-ADTLTSVRFNPAEPDVFATAGSDRGVALYDLRSSTPIRKLVMQTRTNALAWNPMEAFNF 258
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH) HSP 1 Score: 92.4 bits (228), Expect = 7.850e-20 Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 28 VDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 +DHH + ++G +WD R+ ++ + W A S+ VR+ P+E L A+T NDR + L+D R+ +P+RK+ M MNANK+AWNPREP++F Sbjct: 163 IDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWG-ADSVLCVRYNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNF 255
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A7S0S4L6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4L6_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 1.920e-19 Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 22 RDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 R +DHH +AG ++WD RS ++ F+W + +ITS R+ P+EP +FA T +DRG++L+D R PVRK+ M +N +AWNP E +F Sbjct: 165 RGIDHHWCRNTFATAGSVVDIWDHTRSEPINTFTWG-SDTITSARFNPAEPDVFATTGSDRGLVLYDLRISTPVRKLIMQTRSNALAWNPMEAFNF 259
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: E2BL45_HARSA (DDB1- and CUL4-associated factor 13 n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BL45_HARSA) HSP 1 Score: 77.0 bits (188), Expect = 2.490e-14 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 16 VVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 V+ + HH + G K +W+ R+ + F W S+ V++ P + L AA T++R IIL+DTR P+RK+TM + +NK+AWNP E + F Sbjct: 153 VLTGISHHRDKPIFATCGEKCHIWEQTRNEPVRTFEWG-VDSLYDVKFNPVQSNLLAACTSERRIILYDTRDTGPLRKITMKLRSNKLAWNPMESMTF 249
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A6P3Y5E9_DINQU (DDB1- and CUL4-associated factor 13 n=2 Tax=Ponerini TaxID=141711 RepID=A0A6P3Y5E9_DINQU) HSP 1 Score: 77.0 bits (188), Expect = 2.490e-14 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 16 VVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 V+ + HH + G K +W+ R+ + F WD S+ +++ P + L AA TN+R IIL+DTR + P+ ++TM + +NK+AWNP E + F Sbjct: 154 VLTGITHHRDRPIFATCGEKCHIWEETRNEPVCTFEWD-VDSLYDIKFNPVQSNLLAACTNERRIILYDTRDKGPLTRITMKLRSNKLAWNPMESMSF 250
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: UPI001C9CBE4C (DDB1- and CUL4-associated factor 13 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CBE4C) HSP 1 Score: 74.3 bits (181), Expect = 2.260e-13 Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = 1 Query: 16 VVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 V+ + HH S + G ++W+ R+ + F W S+ V++ P + L AA ++R IIL+DTR P+RKVT+ + N++AWNP E F Sbjct: 158 VITGISHHRSANLFATCGELCQMWEESRNEPIRTFKWG-VDSLHDVKFNPVQTNLLAACASNRSIILYDTRDTGPLRKVTLKLRTNRLAWNPMEAFSF 254
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A7S2A1T2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1T2_TRICV) HSP 1 Score: 71.6 bits (174), Expect = 2.060e-12 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 1 WRSGGVVRDVDHHLSLERVVSAGVKAE-VWDWHRSAAL--HAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 WR+ G + +DH S + +A A VW RS+ + H W ++ R+ PSE +L A T DRG+ L DTRT ++K + M +N + WNP EP++F Sbjct: 170 WRTPGSFKSIDHSRSEDLFATASDSAVCVWSPDRSSPVQSHEDLWGSDDTVNVARYNPSERSLLACCTADRGVGLFDTRTTSALKKTILAMRSNCLEWNPMEPMNF 275
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A0H5R8Y5_9EUKA (Sof1 domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R8Y5_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 2.790e-12 Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 28 VDHHLSLERV-VSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 +D H + + V+ G + +VW RS LH+F W A +++ R+ E + + ++DR + L+D R P+RK+T+ M +N +AWNP E +F Sbjct: 167 IDAHWRDQSIAVTTGSQVDVWSLERSEPLHSFKWG-ADTVSCARYSRVECDVLGSCSSDRAVTLYDVRMRTPIRKITLQMQSNALAWNPMEAFNF 260
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Match: A0A1R2BIC3_9CILI (DDB1- and CUL4-associated factor 13 n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BIC3_9CILI) HSP 1 Score: 66.6 bits (161), Expect = 1.170e-10 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 55 VVSAGVKAEVWDWHRSAALHAFSWDDASSITSVRWCPSEPTLFAATTNDRGIILHDTRTEVPVRKVTMLMNANKIAWNPREPIHF 309 V S E+WD RS + F + ++ ++ PSE L A +NDRGI++ D+R+ V K+ +L+ +N IAWNPREP++F Sbjct: 162 VTSGHDGVELWDLRRSNPISLFQ-AGSDTVHKAKFNPSEGHLLGALSNDRGILIIDSRSNSVVEKMKLLLKSNDIAWNPREPLNF 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102706.584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102706.584.1 >prot_M-pyrifera_M_contig102706.584.1 ID=prot_M-pyrifera_M_contig102706.584.1|Name=mRNA_M-pyrifera_M_contig102706.584.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp WRSGGVVRDVDHHLSLERVVSAGVKAEVWDWHRSAALHAFSWDDASSITSback to top mRNA from alignment at M-pyrifera_M_contig102706:87..395+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102706.584.1 ID=mRNA_M-pyrifera_M_contig102706.584.1|Name=mRNA_M-pyrifera_M_contig102706.584.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig102706:87..395+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102706:87..395+ >mRNA_M-pyrifera_M_contig102706.584.1 ID=mRNA_M-pyrifera_M_contig102706.584.1|Name=mRNA_M-pyrifera_M_contig102706.584.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig102706:87..395+ (Macrocystis pyrifera P11B4 male)back to top |