prot_M-pyrifera_M_contig1021.452.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1021.452.1
Unique Nameprot_M-pyrifera_M_contig1021.452.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length482
Homology
BLAST of mRNA_M-pyrifera_M_contig1021.452.1 vs. uniprot
Match: D8LC49_ECTSI (TPR Domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC49_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.370e-66
Identity = 196/510 (38.43%), Postives = 249/510 (48.82%), Query Frame = 0
Query:    1 MQGSLILLQKAKLLTSRKWPYLGDARLQARAVTLNNFGCLMKKWGKPRVGITYLARALKIQARAPGGADNPAGTHANMSAALSTLGLHRAAAVYAANAVGIASRAV-EKAGAVATAEDAPT-DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------SSSV-------HNDERVDSAAEQDRREGVAPLASNDDTDCAITFQQAASTDALSLEANRGGEGEPRGSCAKDD-SMAVAASHHEKE----STAGGLLAIAYFNLAVEREHLGQPEAALEAYEKARATAALHLDPEGPVAKGMELALETASDTALPV--FCTPRAVVQS--SCLSFPSIGKLYFGPKPQG--ATXXXXXXXXXXXXXXXHAKNDARESSGQSPLERAYLSQQPSP-PSHRDRXXXXXXXXXXXPTSVVGSGSPGPQRAGRWARDAQELVPPRNALTQISASSGGGGGMHGVRSEIQPSDKRQIRQEDGIL-WRARACAEWGCSPDDARRAQQ 482
            ++ S+ LLQKA LLTSR  P+LG ARLQARA+TLNNFGCLMK WGKPR  + +LARAL+I+A+ PGGADNPAGTH NMSAALST+GLHR AA++A +A+ +AS+A+ E+    +  ED  T  G                                      G      SSSV        + E V S+A  D     +P AS+          +       +     G  G      A D+ S+    S  +++    S AGGLLAIA FNL VEREHLGQ +AA+ +Y+ AR+ A  HL PE PVAKG+E ALE AS  A     +   RA  +S  +  SFP IGKL FG K     +                H +    E++ +  LE AY S +P P P H+                   S S GPQRAGRW        P   A+ +              RSE   +  R+    DG L WRA ACAEW CSP +A  AQ+
Sbjct:   81 IKASVRLLQKASLLTSRGQPFLGKARLQARALTLNNFGCLMKNWGKPRESVKFLARALRIEAKVPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAMMEQEAGFSYVEDPNTASGDPADMDEDGAAVASVHLTSADSGTKGGVGDSGNSVPSVGVTGCLESSSVPRPEVQGEDGETVSSSAVADDGRTCSPEASSSVHHADHDVPEGGKKANPAENGTEGHGGXXXXESAGDEKSVQGDTSSVDRQDGPPSAAGGLLAIACFNLGVEREHLGQLDAAIASYKYARSAADQHLGPESPVAKGIETALEKASAAAATAASYSRKRAASRSRVAVSSFPCIGKLKFGQKNSQVPSRFDGVGLSPRCRSQQQHGEEVVGEATARDLLEHAYTSPRPCPAPPHKGSWARLGHVPTPRSAPPARSASRGPQRAGRWT---SVDTPAARAMKEAQR-----------RSEGWRNGGRKRGDVDGDLRWRALACAEWQCSPREALHAQR 576          
BLAST of mRNA_M-pyrifera_M_contig1021.452.1 vs. uniprot
Match: A0A7S1SZ57_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZ57_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 5.630e-9
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    3 GSLILLQKAKLLTS--RKWPYLGDARLQARAVTLNNFGCLMKKWGKPRVGITYLARALKIQARAPGGA-DNPAGTHANMSAALSTLGLHRA 90
             S  + +KA++LT+         +AR++ RA+T NN GC  K+ GK    + YL R +KI+  A  GA +NPA TH N++A LSTLG H A
Sbjct:   18 ASYEMFKKAEMLTAPGSSLAEKPEARMRLRAITFNNLGCYYKQRGKLHAALHYLERTVKIEEAADIGAVENPASTHLNIAATLSTLGRHSA 108          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1021.452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC49_ECTSI1.370e-6638.43TPR Domain containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1SZ57_9CHLO5.630e-942.86Hypothetical protein (Fragment) n=2 Tax=Tetraselmi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 31..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1021contigM-pyrifera_M_contig1021:9782..11311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1021.452.1mRNA_M-pyrifera_M_contig1021.452.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1021 9782..11311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1021.452.1 ID=prot_M-pyrifera_M_contig1021.452.1|Name=mRNA_M-pyrifera_M_contig1021.452.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=482bp
MQGSLILLQKAKLLTSRKWPYLGDARLQARAVTLNNFGCLMKKWGKPRVG
ITYLARALKIQARAPGGADNPAGTHANMSAALSTLGLHRAAAVYAANAVG
IASRAVEKAGAVATAEDAPTDGGGGSKDHEASAENSVTNNNGGGGGGGGG
GGGGGSDDREGSSSVHNDERVDSAAEQDRREGVAPLASNDDTDCAITFQQ
AASTDALSLEANRGGEGEPRGSCAKDDSMAVAASHHEKESTAGGLLAIAY
FNLAVEREHLGQPEAALEAYEKARATAALHLDPEGPVAKGMELALETASD
TALPVFCTPRAVVQSSCLSFPSIGKLYFGPKPQGATPRGIRPSPRRLSPR
RHAKNDARESSGQSPLERAYLSQQPSPPSHRDRRARASRLSRMSPTSVVG
SGSPGPQRAGRWARDAQELVPPRNALTQISASSGGGGGMHGVRSEIQPSD
KRQIRQEDGILWRARACAEWGCSPDDARRAQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf