prot_M-pyrifera_M_contig100488.101.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100488.101.1
Unique Nameprot_M-pyrifera_M_contig100488.101.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A8D1BJT9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1BJT9_PIG)

HSP 1 Score: 112 bits (279), Expect = 1.730e-30
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0
Query:   20 VRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            +RAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV
Sbjct:   11 IRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 68          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: D7FP92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP92_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.000e-28
Identity = 57/77 (74.03%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 HLSFFPTNNVWSVPAMCHSVRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            H    P +  W      + +RAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTH+PA+TGIIRHVLQQLE+LKV
Sbjct:   47 HKEMCPYDQDW------YYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPAATGIIRHVLQQLEALKV 117          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A835ZNM6_9STRA (Ribosomal protein S19e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNM6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.080e-20
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0
Query:   20 VRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            VRAAAVARKVYLRPGRGVGGL+KAFG+  RRGT TN H  AS G+IRH+LQQLE++ V
Sbjct:   60 VRAAAVARKVYLRPGRGVGGLTKAFGSVERRGTRTNHHARASGGLIRHILQQLETMSV 117          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A7S0REN0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0REN0_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 1.280e-14
Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   20 VRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            +RAA++AR++YLR GRGVGGL K +G K RRG+  N H  AS  IIRH+LQQLE LK+
Sbjct:   79 IRAASIARQIYLRGGRGVGGLRKRYGGKVRRGSRPNLHGQASGSIIRHILQQLEILKI 136          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A7S3LIR0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LIR0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.600e-13
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    1 HLSFFPTNNVWSVPAMCHSVRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            H    P +  W      + +RAA++AR VYLRP  G+GGL K +G++ARRGT+T     A++G+IRH+L+QLE++ V
Sbjct:   45 HKELCPFDQDW------YYIRAASIARHVYLRPHTGIGGLQKKYGSRARRGTLTEHFHKANSGLIRHILKQLEAIGV 115          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: F0YR54_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR54_AURAN)

HSP 1 Score: 68.9 bits (167), Expect = 3.500e-13
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 HLSFFPTNNVWSVPAMCHSVRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            H    PTN  W      + VRAA++ARKVYL+PG G+G L K +G + RRG+    ++ A+ G+IR VLQQLE  KV
Sbjct:   28 HKELAPTNEDW------YFVRAASIARKVYLKPGIGIGALRKWYGGQYRRGSRAKCYQKAAAGVIRSVLQQLEETKV 98          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A7R9TG91_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TG91_9VIRI)

HSP 1 Score: 70.1 bits (170), Expect = 5.990e-13
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 0
Query:   20 VRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            +RAA++AR VY+RP  GVGG  K FG+K RRGT    HR A+ G IRH+LQQLE++KV
Sbjct:   55 IRAASIARHVYIRPDVGVGGFKKRFGSKYRRGTRAMHHRDAAGGHIRHMLQQLEAIKV 112          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A7R9SWN7_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SWN7_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 1.000e-12
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   20 VRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            VRAA+VAR++YLR GRGVGGL K +G   R G+  N H  AS  IIRH+LQQLE LK+
Sbjct:   57 VRAASVARQIYLRGGRGVGGLRKRYGGTKRDGSRPNHHAIASGSIIRHILQQLEILKI 114          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A7S1Z1P9_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1Z1P9_TRICV)

HSP 1 Score: 67.0 bits (162), Expect = 3.130e-12
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   20 VRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            +RAA++ARKVYLRPG GVG L K +G   RRGT T   R A++GIIR VL QLE +KV
Sbjct:   60 IRAASIARKVYLRPGLGVGQLQKWYGGSYRRGTRTEHFRKANSGIIRSVLIQLEGMKV 117          
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Match: A0A8J2WX61_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX61_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.240e-12
Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 HLSFFPTNNVWSVPAMCHSVRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKV 77
            H    PT++ W      + VRAA++ARKVYL+PG GVG L K +G + RRG    T + A+ G+IR VLQQLE  KV
Sbjct:   47 HKELGPTDDDW------YFVRAASIARKVYLKPGVGVGALRKWYGGQYRRGARAKTFQRAAGGLIRSVLQQLEETKV 117          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100488.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1BJT9_PIG1.730e-3098.28Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
D7FP92_ECTSI1.000e-2874.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZNM6_9STRA6.080e-2075.86Ribosomal protein S19e n=1 Tax=Tribonema minus Tax... [more]
A0A7S0REN0_9CHLO1.280e-1462.07Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S3LIR0_9STRA1.600e-1345.45Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
F0YR54_AURAN3.500e-1348.05Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7R9TG91_9VIRI5.990e-1360.34Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7R9SWN7_9CHLO1.000e-1262.07Hypothetical protein n=1 Tax=Polyblepharides amyli... [more]
A0A7S1Z1P9_TRICV3.130e-1262.07Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A8J2WX61_9STRA4.240e-1249.35Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 9..77
e-value: 5.2E-5
score: -14.6
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 19..77
e-value: 2.0E-17
score: 63.2
IPR001266Ribosomal protein S19ePANTHERPTHR1171040S RIBOSOMAL PROTEIN S19coord: 19..76
IPR038111Ribosomal protein S19e domain superfamilyGENE3D1.10.10.2700coord: 14..77
e-value: 2.2E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR11710:SF1440S RIBOSOMAL PROTEIN S19-1-RELATEDcoord: 19..76
NoneNo IPR availablePRODOMPD003854coord: 1..77
e-value: 2.0E-12
score: 169.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 20..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100488contigM-pyrifera_M_contig100488:131..361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100488.101.1mRNA_M-pyrifera_M_contig100488.101.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100488 131..361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100488.101.1 ID=prot_M-pyrifera_M_contig100488.101.1|Name=mRNA_M-pyrifera_M_contig100488.101.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
HLSFFPTNNVWSVPAMCHSVRAAAVARKVYLRPGRGVGGLSKAFGTKARR
GTMTNTHRPASTGIIRHVLQQLESLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001266Ribosomal_S19e
IPR038111Ribosomal_S19e_sf
IPR036390WH_DNA-bd_sf