mRNA_M-pyrifera_M_contig99368.22862.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99368.22862.1
Unique NamemRNA_M-pyrifera_M_contig99368.22862.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E2TKT3_9GAMM (UmuC domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TKT3_9GAMM)

HSP 1 Score: 274 bits (701), Expect = 9.060e-88
Identity = 132/229 (57.64%), Postives = 175/229 (76.42%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687
            SCER+F   + ++PVVVLSNNDGCI+ARSNE+K LGVPMGAP++QY+ LL+K++T IFSSNYQLYADIS RIM +IK + P +EVYSIDEAF+Q     ++ AFA  LK+ + QW+G+PVSIGIAPTKTLAKAANY+AK  T +G++ C    I  +L  VPL ++WGVGRNM ++F  +GITTSL L++    Q++K +G+VYQ +VMEL G   L L+   P++ I+
Sbjct:   13 SCERIFRSDLINKPVVVLSNNDGCIIARSNEVKQLGVPMGAPLFQYRTLLEKYHTTIFSSNYQLYADISRRIMMLIKQYAPCMEVYSIDEAFIQFESRTDYFAFASHLKKIIKQWIGVPVSIGIAPTKTLAKAANYVAKNNTSNGIYICLSKQISLLLKQVPLSEIWGVGRNMLEQFKRAGITTSLNLQQRCSHQIQKKYGVVYQKLVMELKGQSFLPLENIQPKQKIM 241          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E1TMT8_9GAMM (Type VI secretion protein ImpB n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E1TMT8_9GAMM)

HSP 1 Score: 254 bits (649), Expect = 7.770e-80
Identity = 127/231 (54.98%), Postives = 170/231 (73.59%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDK--NHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQ-CDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684
            SCER+FNP +  +P+ VLSNNDGCIVARSNEIKALG+PMGAPM+QYK LL++    I SSNYQLY D+S R+M  ++ F P +EVYSIDEAF++L E +  + + ++L++++TV QW GIPVSIGIAP KTLAK AN++AKK T +GVF  C  T   K+L + P+GDLWGVGR + K+ +  GI T+L L+  D +  RK F +V + +V EL G  CL L++ + +KNI
Sbjct:   21 SCERVFNPALEKKPMAVLSNNDGCIVARSNEIKALGIPMGAPMFQYKKLLEQKKAVILSSNYQLYGDMSQRVMTTLRQFTPAMEVYSIDEAFLRLEEFRRLDLDKYSLEIRKTVKQWTGIPVSIGIAPNKTLAKVANHVAKKHTQAGVFNICKKTTQTKVLANFPVGDLWGVGRQLSKRLNEMGINTALKLRDVDIVWARKHFTVVGERIVRELRGVNCLELEEVIAKKNI 251          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E0GP16_9GAMM (Type VI secretion protein ImpB n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0GP16_9GAMM)

HSP 1 Score: 253 bits (647), Expect = 1.600e-79
Identity = 128/231 (55.41%), Postives = 170/231 (73.59%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAE--DKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGI-DKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684
            SCER+FNP +  +PV VLSNNDGCIVARSNE+K+LG+PMGAP++QY+ +L+K N  I SSNYQLY D+S R+M  +K F P +E+YSIDEAF++L     K+ EA+A+ +KQTV QW GIPVSIGIAPTKTLAK AN++AKK T SGVF        +++L +  +GDLWG+GR +  +    GI T+L L+  D L +RK F +V + +V EL GT CL L++ +P+KNI
Sbjct:   22 SCERVFNPALEKKPVAVLSNNDGCIVARSNELKSLGIPMGAPVHQYEKMLEKKNAVILSSNYQLYGDMSHRVMETLKQFSPAMEIYSIDEAFLRLDSFRQKDLEAYAIQMKQTVKQWTGIPVSIGIAPTKTLAKVANHMAKKHTQSGVFDLRRRATQEEVLANFRVGDLWGIGRRLATRLEEMGINTALKLRDVDILWMRKHFTVVGERLVRELRGTSCLDLEEVMPKKNI 252          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A849HQ34_9GAMM (Y-family DNA polymerase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A849HQ34_9GAMM)

HSP 1 Score: 236 bits (602), Expect = 7.030e-73
Identity = 109/230 (47.39%), Postives = 166/230 (72.17%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAE--DKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684
            SCER+FNP + H+P+V+LSNNDGC++ARSNE KA+G+PMG P +Q K L+++ +T +FSSNY LY D+S+RIM ++  F P  E+YSIDEAF++L     ++H  +A  ++Q +L+  GIPVS+GI PTKTLAK ANYIAKKKT+ G+F+     +++ML  + + D+WG+G N+ K+     I ++L  K++ P+++RK F +V + +V EL    CL L++  P+++I
Sbjct:   13 SCERVFNPALKHKPIVILSNNDGCVIARSNEAKAIGIPMGLPYFQCKTLIEQSHTHVFSSNYTLYGDMSSRIMSLLSAFTPEYEIYSIDEAFLKLDSLAIQDHLVYASKIQQHILKSTGIPVSVGIGPTKTLAKVANYIAKKKTLLGLFEIHAANVEEMLASLAVEDIWGIGNNLGKRLRQMHIHSALDFKQASPVKMRKQFSVVVEKIVHELNSLSCLGLNEIEPKQSI 242          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E8XA68_9RHOB (DNA-directed DNA polymerase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E8XA68_9RHOB)

HSP 1 Score: 236 bits (602), Expect = 7.220e-73
Identity = 118/234 (50.43%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKNHEAFAL--DLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGID---KMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687
            SCER+FNP + ++P+VVLSNNDGCI+ARSNE K LG+PMGAP +Q K LL+K+  ++FSSNYQLY DIS R+M  +  FVP +EVYSIDEAF++L +    + ++L  D++  VL+W GIP S GIAPTKTLAK AN IAK+     +F  DLT +D   K+L  +P+ D+WG+     KK    GI  +L L+++DP  +R    ++ + +V EL G  C+ LDK +P+KNI+
Sbjct:   13 SCERIFNPNLSNKPIVVLSNNDGCIIARSNEAKKLGIPMGAPYHQTKYLLKKNKVSVFSSNYQLYGDISRRVMSSLSMFVPEMEVYSIDEAFLRLDKHYGKDPYSLASDIQLKVLKWTGIPTSHGIAPTKTLAKVANKIAKRSNGKNIF--DLTNLDTQTKILARLPIEDIWGISSGWSKKLHNIGIKNALQLRETDPSFIRNHLSVIGERIVYELRGISCIGLDKIMPKKNIL 244          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A5N9EQV2_9CHLR (Y-family DNA polymerase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A5N9EQV2_9CHLR)

HSP 1 Score: 234 bits (598), Expect = 3.120e-72
Identity = 116/236 (49.15%), Postives = 168/236 (71.19%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPN--VEVYSIDEAFVQLAEDKNHEAF--ALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDK---MLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687
            SCER+FNP +  +P+VVLSNNDGC++ARSNE K LG+PMGAP YQYK+ ++K+N  +FSSNYQ Y D+S R+M  +   +PN  +E+YSIDEAF++L      + F  A++++ ++L+W GIP SIGIA TKTL K AN++AKK+T +GVF  DL  ID    +++ +P+ +LWG+ R   +K    GI+T+L LK +DP  ++K   +V + +V EL G  CL L+K +P+K+II
Sbjct:   15 SCERVFNPDLIGKPIVVLSNNDGCVIARSNEAKELGIPMGAPYYQYKSFIEKNNVKVFSSNYQFYGDMSQRVMRSLSMMLPNQDLEIYSIDEAFLRLDGFVKRDLFEWAIEVRSSILKWTGIPTSIGIASTKTLCKIANHVAKKQTQNGVF--DLRDIDLQEYIISDLPVEELWGISRRWGEKLRALGISTALQLKNADPKFIQKKLSVVVERIVYELHGISCLDLEKQMPKKSII 248          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A0A8URM2_LEGHA (Protein umuC n=3 Tax=Legionella TaxID=445 RepID=A0A0A8URM2_LEGHA)

HSP 1 Score: 234 bits (596), Expect = 6.230e-72
Identity = 118/232 (50.86%), Postives = 160/232 (68.97%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQL---AEDKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687
            SCERLF P +   P++VLSNNDGC+VARSNE KALG+ MG P ++ K L Q+HN  +FSSNY LY D+S R+M VI+   P+ E+YSIDEAF+ L   AEDK  + F  DL++T+ ++ GIPVSIGI  TKTLAK AN++AKKK    VF       ++ L+H+ + D+WGVGR  +KK  C G+T +L L K +P  V+  F +V Q  V+EL G PCL L++  P+++I+
Sbjct:   13 SCERLFRPDLRTLPIIVLSNNDGCVVARSNEAKALGIKMGVPYFEVKGLCQEHNVQVFSSNYTLYGDLSHRVMTVIEANWPDTEIYSIDEAFLNLKTLAEDKI-DTFCTDLQKTIFRYTGIPVSIGIGRTKTLAKVANHVAKKKLKIPVFNVT-NQEERWLSHMEVDDIWGVGRQWYKKLICFGVTNALELSKLNPRFVKDRFNVVLQRTVLELTGKPCLELEEIAPKQSIM 242          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E6KGT7_9CHLR (UmuC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E6KGT7_9CHLR)

HSP 1 Score: 231 bits (588), Expect = 9.880e-71
Identity = 115/232 (49.57%), Postives = 164/232 (70.69%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKNHEAF--ALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGI-DKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687
            SCER+F+P +  +PVVVLSNNDGC+V+RSNE K+LG+PMGAP Y+YK L+  +N A+FSSNYQ Y D+S R+M  +K   P++EVYSIDEAF++L  D   + F   L+ ++ V +W GIP+S GIA TKTL+K AN+IAKK+T +GVF      + D+++ ++ + D+WG+  N  KK    GI+T   LKK++P  ++K  G+V + +V EL G  CL L+ S P+KNI+
Sbjct:   17 SCERVFDPSLESKPVVVLSNNDGCVVSRSNEAKSLGIPMGAPYYKYKQLIDDNNVAVFSSNYQFYGDMSERVMGSLKIMTPSLEVYSIDEAFIRL-RDIESDIFNKVLEARKNVFKWTGIPMSFGIAHTKTLSKIANHIAKKRTKAGVFDIRQESVCDEIIKNMNVEDIWGISINWGKKLRSIGISTIFELKKANPGFIKKHLGVVLERVVYELNGISCLGLEDSSPKKNIM 247          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E5QIE0_9CHLR (UmuC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E5QIE0_9CHLR)

HSP 1 Score: 231 bits (588), Expect = 1.010e-70
Identity = 110/234 (47.01%), Postives = 161/234 (68.80%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVP--NVEVYSIDEAFVQLAEDKNHEAFALD--LKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDK-MLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687
            SCER+FNP + ++P +VLSNNDGCI++RSNE K+LG+PMGAP Y+YK +++K+N  ++SSNYQ Y D+S R+M  +   +P  ++E+YSIDEAF++L     H  F L   +K+ +L+W GIP+SIGIAPTKTLAK AN++AKK T +G+F      + K ++++  + DLWG+     KK    GI   L L+ SD   +R +F ++ + MV EL G  CL L+ S P+K+I+
Sbjct:   16 SCERVFNPYLRNKPTIVLSNNDGCIISRSNEAKSLGIPMGAPFYKYKDIIEKNNVEVYSSNYQFYGDMSHRVMKSLDMMIPYKDIEIYSIDEAFIRLDGYGKHNLFDLSQKIKKNILKWTGIPISIGIAPTKTLAKVANHVAKKNTSTGIFDLRDNNLQKKIISNFQIEDLWGISYKWGKKLRALGIKNGLELRNSDTKLIRNNFNVILERMVYELRGISCLNLENSTPKKSIM 249          
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E7G2L5_9CHLR (UmuC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E7G2L5_9CHLR)

HSP 1 Score: 230 bits (586), Expect = 1.920e-70
Identity = 110/231 (47.62%), Postives = 163/231 (70.56%), Query Frame = 1
Query:    1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAE-DKNH-EAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQC-DLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684
            SCERLFNP + ++PVVVLSNNDGCIV+RSNE K LG+PMGAP + Y+ +++K+N  +FSSNYQ Y D+S R+M  +   +PN+E+YSIDEAF++L   + NH  A A  ++  +  W GIP SIGIAPTKTL+K AN IAKK+T +G+F+  D    DK+++++P+ D+WG+     KK    GI+++L LK +D   +R +F ++ + ++ EL G  C+ L+ +  +K+I
Sbjct:   15 SCERLFNPYLNNKPVVVLSNNDGCIVSRSNEAKKLGIPMGAPYHHYRKIIEKNNVTVFSSNYQFYGDMSQRVMDSLNMIIPNIEIYSIDEAFIRLDNFNSNHLTAIAKHIRSKIFMWTGIPTSIGIAPTKTLSKIANRIAKKQTSNGIFEIYDSYITDKIISNIPVEDIWGISYRWGKKLRALGISSALELKNTDTKFIRNNFSIILERIIYELRGLSCIDLNLTSNKKSI 245          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2TKT3_9GAMM9.060e-8857.64UmuC domain-containing protein n=1 Tax=Legionellal... [more]
A0A2E1TMT8_9GAMM7.770e-8054.98Type VI secretion protein ImpB n=2 Tax=Gammaproteo... [more]
A0A2E0GP16_9GAMM1.600e-7955.41Type VI secretion protein ImpB n=1 Tax=Gammaproteo... [more]
A0A849HQ34_9GAMM7.030e-7347.39Y-family DNA polymerase n=1 Tax=Legionellales bact... [more]
A0A2E8XA68_9RHOB7.220e-7350.43DNA-directed DNA polymerase n=2 Tax=Bacteria TaxID... [more]
A0A5N9EQV2_9CHLR3.120e-7249.15Y-family DNA polymerase n=2 Tax=Chloroflexi TaxID=... [more]
A0A0A8URM2_LEGHA6.230e-7250.86Protein umuC n=3 Tax=Legionella TaxID=445 RepID=A0... [more]
A0A2E6KGT7_9CHLR9.880e-7149.57UmuC domain-containing protein n=1 Tax=Chloroflexi... [more]
A0A2E5QIE0_9CHLR1.010e-7047.01UmuC domain-containing protein n=1 Tax=Chloroflexi... [more]
A0A2E7G2L5_9CHLR1.920e-7047.62UmuC domain-containing protein n=1 Tax=Chloroflexi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99368contigM-pyrifera_M_contig99368:3..689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score228.0
Seed ortholog evalue4.4e-57
Seed eggNOG ortholog985867.AEWF01000009_gene1148
Preferred nameumuC
KEGG koko:K02346,ko:K03502
Hectar predicted targeting categoryother localisation
EggNOG free text desc.impB/mucB/samB family
EggNOG OGs1MUUH@1224,2TSJN@28211,47FUW@766,COG0389@1,COG0389@2
EC2.7.7.7
COG Functional cat.L
Best tax levelRickettsiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons1
Model size687
Cds size687
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.350682-CDS-M-pyrifera_M_contig99368:2..6891622816911.350682-CDS-M-pyrifera_M_contig99368:2..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99368 3..689 +
1692278250.9549844-CDS-M-pyrifera_M_contig99368:2..6891692278250.9549844-CDS-M-pyrifera_M_contig99368:2..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99368 3..689 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99368.22862.1prot_M-pyrifera_M_contig99368.22862.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99368 3..689 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99368.22862.1

>prot_M-pyrifera_M_contig99368.22862.1 ID=prot_M-pyrifera_M_contig99368.22862.1|Name=mRNA_M-pyrifera_M_contig99368.22862.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALL
QKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKN
HEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCD
LTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSF
GLVYQTMVMELPGTPCLLLDKSVPRKNII
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mRNA from alignment at M-pyrifera_M_contig99368:3..689+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99368.22862.1 ID=mRNA_M-pyrifera_M_contig99368.22862.1|Name=mRNA_M-pyrifera_M_contig99368.22862.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig99368:3..689+ (Macrocystis pyrifera P11B4 male)
TCTTGCGAACGCTTGTTTAATCCTGGTGTTTGGCATCGTCCGGTTGTGGT GTTGTCGAATAACGATGGTTGTATTGTGGCACGCTCGAATGAAATTAAAG CACTAGGTGTACCCATGGGTGCACCCATGTATCAATACAAAGCGTTACTG CAAAAGCATAATACTGCTATTTTTTCATCGAACTATCAATTGTATGCAGA TATTTCTGCACGGATTATGTGCGTGATCAAAACATTTGTTCCGAATGTAG AGGTGTATTCGATTGATGAAGCTTTTGTGCAGCTAGCTGAAGATAAAAAC CATGAAGCCTTTGCGCTGGATTTAAAACAAACGGTGCTGCAATGGGTTGG CATTCCAGTTTCGATTGGAATTGCACCAACCAAAACCTTGGCGAAAGCTG CAAATTATATTGCCAAGAAAAAAACAGTGAGTGGTGTGTTTCAGTGTGAT CTAACTGGCATCGATAAAATGTTGACCCACGTGCCGTTGGGTGATCTGTG GGGCGTGGGACGCAATATGTTTAAAAAATTTAGCTGTTCAGGTATAACGA CGAGCTTGGCTTTGAAAAAATCAGACCCATTGCAAGTGAGGAAAAGTTTT GGGCTGGTTTATCAAACCATGGTAATGGAATTACCCGGTACACCTTGTTT ATTGCTTGATAAGTCGGTGCCGAGAAAAAACATTATA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99368:3..689+

>mRNA_M-pyrifera_M_contig99368.22862.1 ID=mRNA_M-pyrifera_M_contig99368.22862.1|Name=mRNA_M-pyrifera_M_contig99368.22862.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig99368:3..689+ (Macrocystis pyrifera P11B4 male)
TCTTGCGAACGCTTGTTTAATCCTGGTGTTTGGCATCGTCCGGTTGTGGT
GTTGTCGAATAACGATGGTTGTATTGTGGCACGCTCGAATGAAATTAAAG
CACTAGGTGTACCCATGGGTGCACCCATGTATCAATACAAAGCGTTACTG
CAAAAGCATAATACTGCTATTTTTTCATCGAACTATCAATTGTATGCAGA
TATTTCTGCACGGATTATGTGCGTGATCAAAACATTTGTTCCGAATGTAG
AGGTGTATTCGATTGATGAAGCTTTTGTGCAGCTAGCTGAAGATAAAAAC
CATGAAGCCTTTGCGCTGGATTTAAAACAAACGGTGCTGCAATGGGTTGG
CATTCCAGTTTCGATTGGAATTGCACCAACCAAAACCTTGGCGAAAGCTG
CAAATTATATTGCCAAGAAAAAAACAGTGAGTGGTGTGTTTCAGTGTGAT
CTAACTGGCATCGATAAAATGTTGACCCACGTGCCGTTGGGTGATCTGTG
GGGCGTGGGACGCAATATGTTTAAAAAATTTAGCTGTTCAGGTATAACGA
CGAGCTTGGCTTTGAAAAAATCAGACCCATTGCAAGTGAGGAAAAGTTTT
GGGCTGGTTTATCAAACCATGGTAATGGAATTACCCGGTACACCTTGTTT
ATTGCTTGATAAGTCGGTGCCGAGAAAAAACATTATATCTTGCGAACGCT
TGTTTAATCCTGGTGTTTGGCATCGTCCGGTTGTGGTGTTGTCGAATAAC
GATGGTTGTATTGTGGCACGCTCGAATGAAATTAAAGCACTAGGTGTACC
CATGGGTGCACCCATGTATCAATACAAAGCGTTACTGCAAAAGCATAATA
CTGCTATTTTTTCATCGAACTATCAATTGTATGCAGATATTTCTGCACGG
ATTATGTGCGTGATCAAAACATTTGTTCCGAATGTAGAGGTGTATTCGAT
TGATGAAGCTTTTGTGCAGCTAGCTGAAGATAAAAACCATGAAGCCTTTG
CGCTGGATTTAAAACAAACGGTGCTGCAATGGGTTGGCATTCCAGTTTCG
ATTGGAATTGCACCAACCAAAACCTTGGCGAAAGCTGCAAATTATATTGC
CAAGAAAAAAACAGTGAGTGGTGTGTTTCAGTGTGATCTAACTGGCATCG
ATAAAATGTTGACCCACGTGCCGTTGGGTGATCTGTGGGGCGTGGGACGC
AATATGTTTAAAAAATTTAGCTGTTCAGGTATAACGACGAGCTTGGCTTT
GAAAAAATCAGACCCATTGCAAGTGAGGAAAAGTTTTGGGCTGGTTTATC
AAACCATGGTAATGGAATTACCCGGTACACCTTGTTTATTGCTTGATAAG
TCGGTGCCGAGAAAAAACATTATA
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