mRNA_M-pyrifera_M_contig99368.22862.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E2TKT3_9GAMM (UmuC domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TKT3_9GAMM) HSP 1 Score: 274 bits (701), Expect = 9.060e-88 Identity = 132/229 (57.64%), Postives = 175/229 (76.42%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687 SCER+F + ++PVVVLSNNDGCI+ARSNE+K LGVPMGAP++QY+ LL+K++T IFSSNYQLYADIS RIM +IK + P +EVYSIDEAF+Q ++ AFA LK+ + QW+G+PVSIGIAPTKTLAKAANY+AK T +G++ C I +L VPL ++WGVGRNM ++F +GITTSL L++ Q++K +G+VYQ +VMEL G L L+ P++ I+ Sbjct: 13 SCERIFRSDLINKPVVVLSNNDGCIIARSNEVKQLGVPMGAPLFQYRTLLEKYHTTIFSSNYQLYADISRRIMMLIKQYAPCMEVYSIDEAFIQFESRTDYFAFASHLKKIIKQWIGVPVSIGIAPTKTLAKAANYVAKNNTSNGIYICLSKQISLLLKQVPLSEIWGVGRNMLEQFKRAGITTSLNLQQRCSHQIQKKYGVVYQKLVMELKGQSFLPLENIQPKQKIM 241
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E1TMT8_9GAMM (Type VI secretion protein ImpB n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E1TMT8_9GAMM) HSP 1 Score: 254 bits (649), Expect = 7.770e-80 Identity = 127/231 (54.98%), Postives = 170/231 (73.59%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDK--NHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQ-CDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684 SCER+FNP + +P+ VLSNNDGCIVARSNEIKALG+PMGAPM+QYK LL++ I SSNYQLY D+S R+M ++ F P +EVYSIDEAF++L E + + + ++L++++TV QW GIPVSIGIAP KTLAK AN++AKK T +GVF C T K+L + P+GDLWGVGR + K+ + GI T+L L+ D + RK F +V + +V EL G CL L++ + +KNI Sbjct: 21 SCERVFNPALEKKPMAVLSNNDGCIVARSNEIKALGIPMGAPMFQYKKLLEQKKAVILSSNYQLYGDMSQRVMTTLRQFTPAMEVYSIDEAFLRLEEFRRLDLDKYSLEIRKTVKQWTGIPVSIGIAPNKTLAKVANHVAKKHTQAGVFNICKKTTQTKVLANFPVGDLWGVGRQLSKRLNEMGINTALKLRDVDIVWARKHFTVVGERIVRELRGVNCLELEEVIAKKNI 251
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E0GP16_9GAMM (Type VI secretion protein ImpB n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0GP16_9GAMM) HSP 1 Score: 253 bits (647), Expect = 1.600e-79 Identity = 128/231 (55.41%), Postives = 170/231 (73.59%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAE--DKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGI-DKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684 SCER+FNP + +PV VLSNNDGCIVARSNE+K+LG+PMGAP++QY+ +L+K N I SSNYQLY D+S R+M +K F P +E+YSIDEAF++L K+ EA+A+ +KQTV QW GIPVSIGIAPTKTLAK AN++AKK T SGVF +++L + +GDLWG+GR + + GI T+L L+ D L +RK F +V + +V EL GT CL L++ +P+KNI Sbjct: 22 SCERVFNPALEKKPVAVLSNNDGCIVARSNELKSLGIPMGAPVHQYEKMLEKKNAVILSSNYQLYGDMSHRVMETLKQFSPAMEIYSIDEAFLRLDSFRQKDLEAYAIQMKQTVKQWTGIPVSIGIAPTKTLAKVANHMAKKHTQSGVFDLRRRATQEEVLANFRVGDLWGIGRRLATRLEEMGINTALKLRDVDILWMRKHFTVVGERLVRELRGTSCLDLEEVMPKKNI 252
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A849HQ34_9GAMM (Y-family DNA polymerase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A849HQ34_9GAMM) HSP 1 Score: 236 bits (602), Expect = 7.030e-73 Identity = 109/230 (47.39%), Postives = 166/230 (72.17%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAE--DKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684 SCER+FNP + H+P+V+LSNNDGC++ARSNE KA+G+PMG P +Q K L+++ +T +FSSNY LY D+S+RIM ++ F P E+YSIDEAF++L ++H +A ++Q +L+ GIPVS+GI PTKTLAK ANYIAKKKT+ G+F+ +++ML + + D+WG+G N+ K+ I ++L K++ P+++RK F +V + +V EL CL L++ P+++I Sbjct: 13 SCERVFNPALKHKPIVILSNNDGCVIARSNEAKAIGIPMGLPYFQCKTLIEQSHTHVFSSNYTLYGDMSSRIMSLLSAFTPEYEIYSIDEAFLKLDSLAIQDHLVYASKIQQHILKSTGIPVSVGIGPTKTLAKVANYIAKKKTLLGLFEIHAANVEEMLASLAVEDIWGIGNNLGKRLRQMHIHSALDFKQASPVKMRKQFSVVVEKIVHELNSLSCLGLNEIEPKQSI 242
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E8XA68_9RHOB (DNA-directed DNA polymerase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E8XA68_9RHOB) HSP 1 Score: 236 bits (602), Expect = 7.220e-73 Identity = 118/234 (50.43%), Postives = 163/234 (69.66%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKNHEAFAL--DLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGID---KMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687 SCER+FNP + ++P+VVLSNNDGCI+ARSNE K LG+PMGAP +Q K LL+K+ ++FSSNYQLY DIS R+M + FVP +EVYSIDEAF++L + + ++L D++ VL+W GIP S GIAPTKTLAK AN IAK+ +F DLT +D K+L +P+ D+WG+ KK GI +L L+++DP +R ++ + +V EL G C+ LDK +P+KNI+ Sbjct: 13 SCERIFNPNLSNKPIVVLSNNDGCIIARSNEAKKLGIPMGAPYHQTKYLLKKNKVSVFSSNYQLYGDISRRVMSSLSMFVPEMEVYSIDEAFLRLDKHYGKDPYSLASDIQLKVLKWTGIPTSHGIAPTKTLAKVANKIAKRSNGKNIF--DLTNLDTQTKILARLPIEDIWGISSGWSKKLHNIGIKNALQLRETDPSFIRNHLSVIGERIVYELRGISCIGLDKIMPKKNIL 244
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A5N9EQV2_9CHLR (Y-family DNA polymerase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A5N9EQV2_9CHLR) HSP 1 Score: 234 bits (598), Expect = 3.120e-72 Identity = 116/236 (49.15%), Postives = 168/236 (71.19%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPN--VEVYSIDEAFVQLAEDKNHEAF--ALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDK---MLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687 SCER+FNP + +P+VVLSNNDGC++ARSNE K LG+PMGAP YQYK+ ++K+N +FSSNYQ Y D+S R+M + +PN +E+YSIDEAF++L + F A++++ ++L+W GIP SIGIA TKTL K AN++AKK+T +GVF DL ID +++ +P+ +LWG+ R +K GI+T+L LK +DP ++K +V + +V EL G CL L+K +P+K+II Sbjct: 15 SCERVFNPDLIGKPIVVLSNNDGCVIARSNEAKELGIPMGAPYYQYKSFIEKNNVKVFSSNYQFYGDMSQRVMRSLSMMLPNQDLEIYSIDEAFLRLDGFVKRDLFEWAIEVRSSILKWTGIPTSIGIASTKTLCKIANHVAKKQTQNGVF--DLRDIDLQEYIISDLPVEELWGISRRWGEKLRALGISTALQLKNADPKFIQKKLSVVVERIVYELHGISCLDLEKQMPKKSII 248
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A0A8URM2_LEGHA (Protein umuC n=3 Tax=Legionella TaxID=445 RepID=A0A0A8URM2_LEGHA) HSP 1 Score: 234 bits (596), Expect = 6.230e-72 Identity = 118/232 (50.86%), Postives = 160/232 (68.97%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQL---AEDKNHEAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687 SCERLF P + P++VLSNNDGC+VARSNE KALG+ MG P ++ K L Q+HN +FSSNY LY D+S R+M VI+ P+ E+YSIDEAF+ L AEDK + F DL++T+ ++ GIPVSIGI TKTLAK AN++AKKK VF ++ L+H+ + D+WGVGR +KK C G+T +L L K +P V+ F +V Q V+EL G PCL L++ P+++I+ Sbjct: 13 SCERLFRPDLRTLPIIVLSNNDGCVVARSNEAKALGIKMGVPYFEVKGLCQEHNVQVFSSNYTLYGDLSHRVMTVIEANWPDTEIYSIDEAFLNLKTLAEDKI-DTFCTDLQKTIFRYTGIPVSIGIGRTKTLAKVANHVAKKKLKIPVFNVT-NQEERWLSHMEVDDIWGVGRQWYKKLICFGVTNALELSKLNPRFVKDRFNVVLQRTVLELTGKPCLELEEIAPKQSIM 242
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E6KGT7_9CHLR (UmuC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E6KGT7_9CHLR) HSP 1 Score: 231 bits (588), Expect = 9.880e-71 Identity = 115/232 (49.57%), Postives = 164/232 (70.69%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAEDKNHEAF--ALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGI-DKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687 SCER+F+P + +PVVVLSNNDGC+V+RSNE K+LG+PMGAP Y+YK L+ +N A+FSSNYQ Y D+S R+M +K P++EVYSIDEAF++L D + F L+ ++ V +W GIP+S GIA TKTL+K AN+IAKK+T +GVF + D+++ ++ + D+WG+ N KK GI+T LKK++P ++K G+V + +V EL G CL L+ S P+KNI+ Sbjct: 17 SCERVFDPSLESKPVVVLSNNDGCVVSRSNEAKSLGIPMGAPYYKYKQLIDDNNVAVFSSNYQFYGDMSERVMGSLKIMTPSLEVYSIDEAFIRL-RDIESDIFNKVLEARKNVFKWTGIPMSFGIAHTKTLSKIANHIAKKRTKAGVFDIRQESVCDEIIKNMNVEDIWGISINWGKKLRSIGISTIFELKKANPGFIKKHLGVVLERVVYELNGISCLGLEDSSPKKNIM 247
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E5QIE0_9CHLR (UmuC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E5QIE0_9CHLR) HSP 1 Score: 231 bits (588), Expect = 1.010e-70 Identity = 110/234 (47.01%), Postives = 161/234 (68.80%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVP--NVEVYSIDEAFVQLAEDKNHEAFALD--LKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQCDLTGIDK-MLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNII 687 SCER+FNP + ++P +VLSNNDGCI++RSNE K+LG+PMGAP Y+YK +++K+N ++SSNYQ Y D+S R+M + +P ++E+YSIDEAF++L H F L +K+ +L+W GIP+SIGIAPTKTLAK AN++AKK T +G+F + K ++++ + DLWG+ KK GI L L+ SD +R +F ++ + MV EL G CL L+ S P+K+I+ Sbjct: 16 SCERVFNPYLRNKPTIVLSNNDGCIISRSNEAKSLGIPMGAPFYKYKDIIEKNNVEVYSSNYQFYGDMSHRVMKSLDMMIPYKDIEIYSIDEAFIRLDGYGKHNLFDLSQKIKKNILKWTGIPISIGIAPTKTLAKVANHVAKKNTSTGIFDLRDNNLQKKIISNFQIEDLWGISYKWGKKLRALGIKNGLELRNSDTKLIRNNFNVILERMVYELRGISCLNLENSTPKKSIM 249
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Match: A0A2E7G2L5_9CHLR (UmuC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E7G2L5_9CHLR) HSP 1 Score: 230 bits (586), Expect = 1.920e-70 Identity = 110/231 (47.62%), Postives = 163/231 (70.56%), Query Frame = 1 Query: 1 SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLQKHNTAIFSSNYQLYADISARIMCVIKTFVPNVEVYSIDEAFVQLAE-DKNH-EAFALDLKQTVLQWVGIPVSIGIAPTKTLAKAANYIAKKKTVSGVFQC-DLTGIDKMLTHVPLGDLWGVGRNMFKKFSCSGITTSLALKKSDPLQVRKSFGLVYQTMVMELPGTPCLLLDKSVPRKNI 684 SCERLFNP + ++PVVVLSNNDGCIV+RSNE K LG+PMGAP + Y+ +++K+N +FSSNYQ Y D+S R+M + +PN+E+YSIDEAF++L + NH A A ++ + W GIP SIGIAPTKTL+K AN IAKK+T +G+F+ D DK+++++P+ D+WG+ KK GI+++L LK +D +R +F ++ + ++ EL G C+ L+ + +K+I Sbjct: 15 SCERLFNPYLNNKPVVVLSNNDGCIVSRSNEAKKLGIPMGAPYHHYRKIIEKNNVTVFSSNYQFYGDMSQRVMDSLNMIIPNIEIYSIDEAFIRLDNFNSNHLTAIAKHIRSKIFMWTGIPTSIGIAPTKTLSKIANRIAKKQTSNGIFEIYDSYITDKIISNIPVEDIWGISYRWGKKLRALGISSALELKNTDTKFIRNNFSIILERIIYELRGLSCIDLNLTSNKKSI 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99368.22862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99368.22862.1 >prot_M-pyrifera_M_contig99368.22862.1 ID=prot_M-pyrifera_M_contig99368.22862.1|Name=mRNA_M-pyrifera_M_contig99368.22862.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp SCERLFNPGVWHRPVVVLSNNDGCIVARSNEIKALGVPMGAPMYQYKALLback to top mRNA from alignment at M-pyrifera_M_contig99368:3..689+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99368.22862.1 ID=mRNA_M-pyrifera_M_contig99368.22862.1|Name=mRNA_M-pyrifera_M_contig99368.22862.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig99368:3..689+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99368:3..689+ >mRNA_M-pyrifera_M_contig99368.22862.1 ID=mRNA_M-pyrifera_M_contig99368.22862.1|Name=mRNA_M-pyrifera_M_contig99368.22862.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig99368:3..689+ (Macrocystis pyrifera P11B4 male)back to top |