mRNA_M-pyrifera_M_contig98578.22697.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98578.22697.1
Unique NamemRNA_M-pyrifera_M_contig98578.22697.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: UPI0019A2D4D3 (AAA family ATPase n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=UPI0019A2D4D3)

HSP 1 Score: 216 bits (549), Expect = 7.410e-64
Identity = 116/223 (52.02%), Postives = 152/223 (68.16%), Query Frame = 1
Query:    4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            ++ DNR  +  TLHR+  L N +    IGLT R+GR +  +  ++ DLV           +   S+L LGPPG GKTT LR+M  +L +  G++  V+DTS EIAG G  PHP IGRARR QV   DQQHAV++E V+NH+P+VII+DEIGT +EA A R+I++RGV+++ TAHG  L +L+KNP LV LVGGIQ+VTLG  E R R+ +QKTV ERAG P F
Sbjct:   72 FSGDNRAGIERTLHRISALRNRSGKV-IGLTCRVGRAISGTINVIRDLV-----------ESGKSILFLGPPGVGKTTKLREMGRVLSDELGKRVIVIDTSNEIAGDGDVPHPAIGRARRMQVAHPDQQHAVMIEAVENHTPEVIIIDEIGTEQEAAAARTIAERGVSLIGTAHGNALDNLLKNPTLVDLVGGIQSVTLGDDEAR-RRGTQKTVLERAGQPTF 281          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A2P7EI92_9SYNE (AAA family ATPase n=2 Tax=Synechococcales TaxID=1890424 RepID=A0A2P7EI92_9SYNE)

HSP 1 Score: 209 bits (533), Expect = 2.890e-62
Identity = 115/220 (52.27%), Postives = 147/220 (66.82%), Query Frame = 1
Query:   13 DNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            DNR  + GTLHR+  L N +    IGLT R+GR V  +  ++ DL+               S+LLLGPPG GKTT LR++A +L + F ++  V+DTS EIAG G  PHP IGRARR QV K   QH V++E V+NH P+VI++DEIGT +EA A RSI++RGV +VATAHG  L +L++NP L  LVGGIQAVTLG  E R R+ S+K V ER+ AP F
Sbjct:   79 DNRAGIAGTLHRISALRNRS-GVVIGLTCRVGRSVSGTVAMVRDLLDSAQ-----------SLLLLGPPGVGKTTALREIARVLADEFAKRVVVIDTSNEIAGDGDVPHPAIGRARRMQVAKPQWQHRVMIEAVENHMPQVIVIDEIGTAEEALAARSIAERGVQLVATAHGNALENLLRNPTLSDLVGGIQAVTLGDDEAR-RRGSRKAVLERSAAPTF 285          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A7X3QLE5_9CHLR (AAA family ATPase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3QLE5_9CHLR)

HSP 1 Score: 205 bits (522), Expect = 1.080e-61
Identity = 114/224 (50.89%), Postives = 151/224 (67.41%), Query Frame = 1
Query:    1 PWTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            P+ +DNR  +  TLHR+  + N      +GLT R+GR V  + R++ D+V R  ES          +LLLG PG GKTT+LR +A +L +  G++  +VDTS EIAG G  PHP IG ARR QV   DQQHAV++E V+NH P+VI++DEIGT  EA+A R+I++RGV +VATAHG TL +L++NP L  L+GGIQ+VTLG  E R R+ +QKTV ER   P F
Sbjct:   74 PFGADNRAGIERTLHRISAIRNRTGKV-VGLTVRVGRAVYGTIRIIEDIV-RTGES----------ILLLGKPGVGKTTMLRDVARVLADDAGKRVVIVDTSNEIAGDGDIPHPGIGSARRMQVPSPDQQHAVMIEAVENHMPEVIVIDEIGTELEANAARTIAERGVQLVATAHGNTLENLVQNPTLSDLIGGIQSVTLGDIEARRRR-TQKTVLERKAPPTF 284          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A1Z8NEN9_9SYNE (AAA family ATPase n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A1Z8NEN9_9SYNE)

HSP 1 Score: 208 bits (529), Expect = 1.830e-61
Identity = 117/224 (52.23%), Postives = 149/224 (66.52%), Query Frame = 1
Query:    1 PWTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            P+  DNR  +  TLHR+  + N A    IGLT R+GR V  +  ++ DL+    ESL          LLLG PG GKTT LR++A +L +  GR+  V+DTS EIAG G  PHP IGRARR QV +   QH V++E VQNH P+VI++DEIGT +EAHA R+I++RGV +VATAHG  L +L++NP L  LVGG+Q+VTLG  E R R+ SQK V ERA AP F
Sbjct:   87 PFGGDNRAGIERTLHRISAVRNRAGRV-IGLTCRVGRAVFGTVAMVRDLLDS-GESL----------LLLGRPGVGKTTALREIARVLADELGRRVMVIDTSNEIAGDGDVPHPAIGRARRLQVARPQLQHRVMIEAVQNHMPEVIVIDEIGTEQEAHAARTIAERGVQLVATAHGNALANLVRNPTLXDLVGGVQSVTLGDEEAR-RRGSQKAVLERAAAPTF 297          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A6A5L8T0_LUPAL (R3H domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L8T0_LUPAL)

HSP 1 Score: 208 bits (529), Expect = 3.230e-61
Identity = 111/223 (49.78%), Postives = 149/223 (66.82%), Query Frame = 1
Query:    4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            ++ DNR  +  TLHR+  L N +    IGLT R+GR +  +  ++ DLV           +   S+L LGPPG GKTT LR+MA +L +   ++  V+DTS EIAG G  PHP IGRARR QV + ++QH V++E V+NH+P+VI++DEIGT +EA A R+I++RGV ++ TAHG  L +L+KNP LV LVGGIQ VTLG  E R R+ +QKTV ERA  P F
Sbjct:   39 FSGDNRAGIERTLHRISALRNRSGKI-IGLTCRIGRAISGTIEVIRDLV-----------ESGKSILFLGPPGVGKTTKLREMARVLADELSKRVIVIDTSNEIAGDGDVPHPAIGRARRMQVPRPEEQHNVMIEAVENHTPEVIVIDEIGTEQEAQAARTIAERGVMLIGTAHGSALDNLLKNPTLVDLVGGIQTVTLGDDEAR-RRGTQKTVLERAAEPTF 248          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A7Y4TZV8_9DELT (AAA family ATPase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4TZV8_9DELT)

HSP 1 Score: 207 bits (526), Expect = 2.070e-60
Identity = 115/223 (51.57%), Postives = 150/223 (67.26%), Query Frame = 1
Query:    4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            +T DNR  +P TLHR+  L N   +  IGLT R+GR V  +  ++ D++      + Q  K   SVLLLGPPG GKTT+LR+ A +L +  G++  VVDTS EIAG G  PHP IGRARR QV   + QH V++E V+NH P+VI+VDEIGT  EA A R+I++RGV ++ATAHG  L +L++NP L  L+GGIQ+VTLG  E R R+ +QKTV ER   P F
Sbjct:   90 FTHDNRAGIPSTLHRISALRNRTGDI-IGLTCRVGRAVFGTVNIVKDII------ITQDTK---SVLLLGPPGVGKTTLLREAARVLADEAGKRVIVVDTSNEIAGDGDIPHPAIGRARRMQVPSPELQHKVMIEAVENHMPEVIVVDEIGTEAEATAARTIAERGVRLIATAHGSALENLIQNPTLADLIGGIQSVTLGDDEAR-RRGTQKTVLERKAPPTF 301          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A3S0CSR1_9BACT (AAA family ATPase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A3S0CSR1_9BACT)

HSP 1 Score: 206 bits (525), Expect = 2.410e-60
Identity = 111/223 (49.78%), Postives = 147/223 (65.92%), Query Frame = 1
Query:    4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            ++ DNR  +  TLHR+  + N      IGLT R+GR V  +  ++ DLV           +   S+L LGPPG GKTT LR+MA +L +  G++  V+DTS EIAG G  PHP IGRARR QV   D QHAV++E V+NH+P+ I++DEIGT +E+ A R+I++RGV ++ TAHG  L +L+KNP +V LVGGIQ VTLG  E R R+ +QKTV ERA  P F
Sbjct:   72 FSGDNRAGIERTLHRISAIRNRTGKV-IGLTCRVGRAVSGTISIIRDLV-----------ESGKSILFLGPPGVGKTTKLREMARVLADEMGKRVIVIDTSNEIAGDGDVPHPAIGRARRMQVSHPDAQHAVMIEAVENHTPEAIVIDEIGTEQESAAARTIAERGVVLIGTAHGNALENLLKNPTMVDLVGGIQTVTLGDDEAR-RRGTQKTVLERATEPTF 281          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A2K3DQW5_CHLRE (AAA domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DQW5_CHLRE)

HSP 1 Score: 212 bits (539), Expect = 5.030e-60
Identity = 116/227 (51.10%), Postives = 140/227 (61.67%), Query Frame = 1
Query:   10 SDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPV------SVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            SD R C PGTLHR+  +      A +GLTYRLGRHV      L D++  +A     R+  P       S+LLLG PGAGKTT+LR +A  L +  G    VVDTS EIAGG   PH CIG ARR +V +RDQ  AV++E VQNH P+V++VDE+G+ +EA A RSISQRGV +VATAHG  L  +M NPDL  LVGG+Q V LG           KT  ER G P F
Sbjct:  532 SDGRCCPPGTLHRISAVREPGSGAVVGLTYRLGRHVPGVAAALADVLSDLAGRGRGRDGEPNAASMAGSLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDTVPHSCIGSARRLKVGRRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTRTERRGEPTF 758          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A838J3F4_9CHLR (AAA family ATPase (Fragment) n=1 Tax=Ktedonobacteraceae bacterium TaxID=2740538 RepID=A0A838J3F4_9CHLR)

HSP 1 Score: 201 bits (511), Expect = 5.990e-60
Identity = 112/220 (50.91%), Postives = 148/220 (67.27%), Query Frame = 1
Query:   13 DNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            DNR  +  TLHR+  + N      +GLT R+GR V  S  L+ D+V +     GQ      S+L+LG PG GKTT+LR++A +L +   ++  VVDTS EIAG G  PHP IGRARR QV +  +QHAV++E V+NH P+VI++DEIGT  EA A R+I++RGV +VATAHG +LG+L+ NP L  LVGGIQ VTLG  E R R+ +QK++QER   P F
Sbjct:   78 DNRAGIERTLHRISAMRNRKGRV-VGLTCRIGRAVLGSIALIRDIVEQ-----GQ------SILILGRPGVGKTTLLREIARVLADEANKRVVVVDTSNEIAGDGDIPHPGIGRARRMQVSRTSEQHAVMIEAVENHMPQVIVIDEIGTELEAGAARTIAERGVQLVATAHGNSLGNLLVNPTLSDLVGGIQTVTLGDEEAR-RRHTQKSIQERKSLPTF 284          
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A6I4ZHZ3_9CHLR (AAA family ATPase n=3 Tax=Bacteria TaxID=2 RepID=A0A6I4ZHZ3_9CHLR)

HSP 1 Score: 206 bits (523), Expect = 6.600e-60
Identity = 115/224 (51.34%), Postives = 151/224 (67.41%), Query Frame = 1
Query:    1 PWTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672
            P+ +DNR  +  TLHR+  + N      +GLT R+GR V  + R++ D+V R  ES          +LLLG PG GKTT+LR +A +L +  G++  +VDTS EIAG G  PHP IG ARR QV   DQQHAV++E V+NH P+VII+DEIGT  EA+A R+I++RGV +VATAHG TL +L++NP L  L+GGIQ+VTLG  E R R+ +QKTV ER   P F
Sbjct:   74 PFGADNRAGIERTLHRISAIRNRTGKV-VGLTVRVGRAVYGTIRIIEDIV-RTGES----------ILLLGKPGVGKTTMLRDVARVLADDAGKRVVIVDTSNEIAGDGDIPHPGIGSARRMQVPSPDQQHAVMIEAVENHMPEVIIIDEIGTELEANAARTIAERGVQLVATAHGNTLENLVQNPTLSDLIGGIQSVTLGDIEARRRR-TQKTVLERKAPPTF 284          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019A2D4D37.410e-6452.02AAA family ATPase n=1 Tax=Leptolyngbya sp. TaxID=4... [more]
A0A2P7EI92_9SYNE2.890e-6252.27AAA family ATPase n=2 Tax=Synechococcales TaxID=18... [more]
A0A7X3QLE5_9CHLR1.080e-6150.89AAA family ATPase n=1 Tax=Dehalococcoidia bacteriu... [more]
A0A1Z8NEN9_9SYNE1.830e-6152.23AAA family ATPase n=2 Tax=unclassified Synechococc... [more]
A0A6A5L8T0_LUPAL3.230e-6149.78R3H domain-containing protein n=2 Tax=cellular org... [more]
A0A7Y4TZV8_9DELT2.070e-6051.57AAA family ATPase n=1 Tax=Deltaproteobacteria bact... [more]
A0A3S0CSR1_9BACT2.410e-6049.78AAA family ATPase n=1 Tax=Candidatus Melainabacter... [more]
A0A2K3DQW5_CHLRE5.030e-6051.10AAA domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A838J3F4_9CHLR5.990e-6050.91AAA family ATPase (Fragment) n=1 Tax=Ktedonobacter... [more]
A0A6I4ZHZ3_9CHLR6.600e-6051.34AAA family ATPase n=3 Tax=Bacteria TaxID=2 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98578contigM-pyrifera_M_contig98578:3..674 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score202.6
Seed ortholog evalue1.9e-49
Seed eggNOG ortholog41875.XP_007508762.1
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.ATPases associated with a variety of cellular activities
EggNOG OGs2QQ4X@2759,34HBY@3041,37K6B@33090,COG3854@1
COG Functional cat.O
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size672
Cds size645
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816903.1220589-CDS-M-pyrifera_M_contig98578:2..6471622816903.1220589-CDS-M-pyrifera_M_contig98578:2..647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98578 3..647 -
1692278246.1402018-CDS-M-pyrifera_M_contig98578:2..6471692278246.1402018-CDS-M-pyrifera_M_contig98578:2..647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98578 3..647 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816903.1333578-UTR-M-pyrifera_M_contig98578:647..6741622816903.1333578-UTR-M-pyrifera_M_contig98578:647..674Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig98578 648..674 -
1692278246.1539655-UTR-M-pyrifera_M_contig98578:647..6741692278246.1539655-UTR-M-pyrifera_M_contig98578:647..674Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig98578 648..674 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98578.22697.1prot_M-pyrifera_M_contig98578.22697.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98578 3..647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98578.22697.1

>prot_M-pyrifera_M_contig98578.22697.1 ID=prot_M-pyrifera_M_contig98578.22697.1|Name=mRNA_M-pyrifera_M_contig98578.22697.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp
MPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQ
RNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGG
RTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHA
VRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERK
ASQKTVQERAGAPCF
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mRNA from alignment at M-pyrifera_M_contig98578:3..674-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98578.22697.1 ID=mRNA_M-pyrifera_M_contig98578.22697.1|Name=mRNA_M-pyrifera_M_contig98578.22697.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig98578:3..674- (Macrocystis pyrifera P11B4 male)
CCGTGGACCAGCGACAACCGCTACTGCATGCCCGGCACACTCCACCGCGT GTGCCGACTGCTGAACACCGCTGACAACGCAACAATCGGTCTCACCTACC GCCTGGGCAGACACGTGGGCGACTCCAATCGTCTCCTCGGCGACCTCGTG CACCGCGTCGCAGAGAGCCTTGGCCAACGCAACAAGAGGCCCGTCTCGGT CCTCCTGCTCGGCCCTCCCGGCGCAGGCAAGACGACGATCCTCAGGCAGA TGGCAGCTCTCCTGGGAGAGACCTTTGGCAGGCAGACAGCGGTGGTCGAC ACCTCTCTCGAGATCGCTGGCGGCGGCCGCACTCCCCACCCGTGCATTGG ACGAGCGCGGCGGTTCCAGGTGGAGAAGAGGGATCAGCAGCACGCCGTGC TCGTGGAGGTGGTGCAGAACCACTCCCCAAAGGTGATCATCGTCGACGAG ATTGGCACCCCGAAGGAGGCTCACGCAGTTCGCAGCATCTCACAGAGAGG AGTGGCAATGGTCGCCACGGCTCATGGCAAGACGCTGGGAGACCTCATGA AGAACCCCGACCTCGTCCGCTTGGTTGGCGGCATTCAAGCCGTCACCCTC GGTGCTGGGGAGGTGAGAGAGCGGAAGGCGAGCCAGAAGACCGTCCAGGA GAGAGCTGGCGCTCCCTGCTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98578:3..674-

>mRNA_M-pyrifera_M_contig98578.22697.1 ID=mRNA_M-pyrifera_M_contig98578.22697.1|Name=mRNA_M-pyrifera_M_contig98578.22697.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig98578:3..674- (Macrocystis pyrifera P11B4 male)
ATGCCCGGCACACTCCACCGCGTGTGCCGACTGCTGAACACCGCTGACAA
CGCAACAATCGGTCTCACCTACCGCCTGGGCAGACACGTGGGCGACTCCA
ATCGTCTCCTCGGCGACCTCGTGCACCGCGTCGCAGAGAGCCTTGGCCAA
CGCAACAAGAGGCCCGTCTCGGTCCTCCTGCTCGGCCCTCCCGGCGCAGG
CAAGACGACGATCCTCAGGCAGATGGCAGCTCTCCTGGGAGAGACCTTTG
GCAGGCAGACAGCGGTGGTCGACACCTCTCTCGAGATCGCTGGCGGCGGC
CGCACTCCCCACCCGTGCATTGGACGAGCGCGGCGGTTCCAGGTGGAGAA
GAGGGATCAGCAGCACGCCGTGCTCGTGGAGGTGGTGCAGAACCACTCCC
CAAAGGTGATCATCGTCGACGAGATTGGCACCCCGAAGGAGGCTCACGCA
GTTCGCAGCATCTCACAGAGAGGAGTGGCAATGGTCGCCACGGCTCATGG
CAAGACGCTGGGAGACCTCATGAAGAACCCCGACCTCGTCCGCTTGGTTG
GCGGCATTCAAGCCGTCACCCTCGGTGCTGGGGAGGTGAGAGAGCGGAAG
GCGAGCCAGAAGACCGTCCAGGAGAGAGCTGGCGCTCCCTGCTTCATGCC
CGGCACACTCCACCGCGTGTGCCGACTGCTGAACACCGCTGACAACGCAA
CAATCGGTCTCACCTACCGCCTGGGCAGACACGTGGGCGACTCCAATCGT
CTCCTCGGCGACCTCGTGCACCGCGTCGCAGAGAGCCTTGGCCAACGCAA
CAAGAGGCCCGTCTCGGTCCTCCTGCTCGGCCCTCCCGGCGCAGGCAAGA
CGACGATCCTCAGGCAGATGGCAGCTCTCCTGGGAGAGACCTTTGGCAGG
CAGACAGCGGTGGTCGACACCTCTCTCGAGATCGCTGGCGGCGGCCGCAC
TCCCCACCCGTGCATTGGACGAGCGCGGCGGTTCCAGGTGGAGAAGAGGG
ATCAGCAGCACGCCGTGCTCGTGGAGGTGGTGCAGAACCACTCCCCAAAG
GTGATCATCGTCGACGAGATTGGCACCCCGAAGGAGGCTCACGCAGTTCG
CAGCATCTCACAGAGAGGAGTGGCAATGGTCGCCACGGCTCATGGCAAGA
CGCTGGGAGACCTCATGAAGAACCCCGACCTCGTCCGCTTGGTTGGCGGC
ATTCAAGCCGTCACCCTCGGTGCTGGGGAGGTGAGAGAGCGGAAGGCGAG
CCAGAAGACCGTCCAGGAGAGAGCTGGCGCTCCCTGCTTC
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