mRNA_M-pyrifera_M_contig98578.22697.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: UPI0019A2D4D3 (AAA family ATPase n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=UPI0019A2D4D3) HSP 1 Score: 216 bits (549), Expect = 7.410e-64 Identity = 116/223 (52.02%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 ++ DNR + TLHR+ L N + IGLT R+GR + + ++ DLV + S+L LGPPG GKTT LR+M +L + G++ V+DTS EIAG G PHP IGRARR QV DQQHAV++E V+NH+P+VII+DEIGT +EA A R+I++RGV+++ TAHG L +L+KNP LV LVGGIQ+VTLG E R R+ +QKTV ERAG P F Sbjct: 72 FSGDNRAGIERTLHRISALRNRSGKV-IGLTCRVGRAISGTINVIRDLV-----------ESGKSILFLGPPGVGKTTKLREMGRVLSDELGKRVIVIDTSNEIAGDGDVPHPAIGRARRMQVAHPDQQHAVMIEAVENHTPEVIIIDEIGTEQEAAAARTIAERGVSLIGTAHGNALDNLLKNPTLVDLVGGIQSVTLGDDEAR-RRGTQKTVLERAGQPTF 281
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A2P7EI92_9SYNE (AAA family ATPase n=2 Tax=Synechococcales TaxID=1890424 RepID=A0A2P7EI92_9SYNE) HSP 1 Score: 209 bits (533), Expect = 2.890e-62 Identity = 115/220 (52.27%), Postives = 147/220 (66.82%), Query Frame = 1 Query: 13 DNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 DNR + GTLHR+ L N + IGLT R+GR V + ++ DL+ S+LLLGPPG GKTT LR++A +L + F ++ V+DTS EIAG G PHP IGRARR QV K QH V++E V+NH P+VI++DEIGT +EA A RSI++RGV +VATAHG L +L++NP L LVGGIQAVTLG E R R+ S+K V ER+ AP F Sbjct: 79 DNRAGIAGTLHRISALRNRS-GVVIGLTCRVGRSVSGTVAMVRDLLDSAQ-----------SLLLLGPPGVGKTTALREIARVLADEFAKRVVVIDTSNEIAGDGDVPHPAIGRARRMQVAKPQWQHRVMIEAVENHMPQVIVIDEIGTAEEALAARSIAERGVQLVATAHGNALENLLRNPTLSDLVGGIQAVTLGDDEAR-RRGSRKAVLERSAAPTF 285
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A7X3QLE5_9CHLR (AAA family ATPase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3QLE5_9CHLR) HSP 1 Score: 205 bits (522), Expect = 1.080e-61 Identity = 114/224 (50.89%), Postives = 151/224 (67.41%), Query Frame = 1 Query: 1 PWTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 P+ +DNR + TLHR+ + N +GLT R+GR V + R++ D+V R ES +LLLG PG GKTT+LR +A +L + G++ +VDTS EIAG G PHP IG ARR QV DQQHAV++E V+NH P+VI++DEIGT EA+A R+I++RGV +VATAHG TL +L++NP L L+GGIQ+VTLG E R R+ +QKTV ER P F Sbjct: 74 PFGADNRAGIERTLHRISAIRNRTGKV-VGLTVRVGRAVYGTIRIIEDIV-RTGES----------ILLLGKPGVGKTTMLRDVARVLADDAGKRVVIVDTSNEIAGDGDIPHPGIGSARRMQVPSPDQQHAVMIEAVENHMPEVIVIDEIGTELEANAARTIAERGVQLVATAHGNTLENLVQNPTLSDLIGGIQSVTLGDIEARRRR-TQKTVLERKAPPTF 284
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A1Z8NEN9_9SYNE (AAA family ATPase n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A1Z8NEN9_9SYNE) HSP 1 Score: 208 bits (529), Expect = 1.830e-61 Identity = 117/224 (52.23%), Postives = 149/224 (66.52%), Query Frame = 1 Query: 1 PWTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 P+ DNR + TLHR+ + N A IGLT R+GR V + ++ DL+ ESL LLLG PG GKTT LR++A +L + GR+ V+DTS EIAG G PHP IGRARR QV + QH V++E VQNH P+VI++DEIGT +EAHA R+I++RGV +VATAHG L +L++NP L LVGG+Q+VTLG E R R+ SQK V ERA AP F Sbjct: 87 PFGGDNRAGIERTLHRISAVRNRAGRV-IGLTCRVGRAVFGTVAMVRDLLDS-GESL----------LLLGRPGVGKTTALREIARVLADELGRRVMVIDTSNEIAGDGDVPHPAIGRARRLQVARPQLQHRVMIEAVQNHMPEVIVIDEIGTEQEAHAARTIAERGVQLVATAHGNALANLVRNPTLXDLVGGVQSVTLGDEEAR-RRGSQKAVLERAAAPTF 297
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A6A5L8T0_LUPAL (R3H domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L8T0_LUPAL) HSP 1 Score: 208 bits (529), Expect = 3.230e-61 Identity = 111/223 (49.78%), Postives = 149/223 (66.82%), Query Frame = 1 Query: 4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 ++ DNR + TLHR+ L N + IGLT R+GR + + ++ DLV + S+L LGPPG GKTT LR+MA +L + ++ V+DTS EIAG G PHP IGRARR QV + ++QH V++E V+NH+P+VI++DEIGT +EA A R+I++RGV ++ TAHG L +L+KNP LV LVGGIQ VTLG E R R+ +QKTV ERA P F Sbjct: 39 FSGDNRAGIERTLHRISALRNRSGKI-IGLTCRIGRAISGTIEVIRDLV-----------ESGKSILFLGPPGVGKTTKLREMARVLADELSKRVIVIDTSNEIAGDGDVPHPAIGRARRMQVPRPEEQHNVMIEAVENHTPEVIVIDEIGTEQEAQAARTIAERGVMLIGTAHGSALDNLLKNPTLVDLVGGIQTVTLGDDEAR-RRGTQKTVLERAAEPTF 248
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A7Y4TZV8_9DELT (AAA family ATPase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4TZV8_9DELT) HSP 1 Score: 207 bits (526), Expect = 2.070e-60 Identity = 115/223 (51.57%), Postives = 150/223 (67.26%), Query Frame = 1 Query: 4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 +T DNR +P TLHR+ L N + IGLT R+GR V + ++ D++ + Q K SVLLLGPPG GKTT+LR+ A +L + G++ VVDTS EIAG G PHP IGRARR QV + QH V++E V+NH P+VI+VDEIGT EA A R+I++RGV ++ATAHG L +L++NP L L+GGIQ+VTLG E R R+ +QKTV ER P F Sbjct: 90 FTHDNRAGIPSTLHRISALRNRTGDI-IGLTCRVGRAVFGTVNIVKDII------ITQDTK---SVLLLGPPGVGKTTLLREAARVLADEAGKRVIVVDTSNEIAGDGDIPHPAIGRARRMQVPSPELQHKVMIEAVENHMPEVIVVDEIGTEAEATAARTIAERGVRLIATAHGSALENLIQNPTLADLIGGIQSVTLGDDEAR-RRGTQKTVLERKAPPTF 301
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A3S0CSR1_9BACT (AAA family ATPase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A3S0CSR1_9BACT) HSP 1 Score: 206 bits (525), Expect = 2.410e-60 Identity = 111/223 (49.78%), Postives = 147/223 (65.92%), Query Frame = 1 Query: 4 WTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 ++ DNR + TLHR+ + N IGLT R+GR V + ++ DLV + S+L LGPPG GKTT LR+MA +L + G++ V+DTS EIAG G PHP IGRARR QV D QHAV++E V+NH+P+ I++DEIGT +E+ A R+I++RGV ++ TAHG L +L+KNP +V LVGGIQ VTLG E R R+ +QKTV ERA P F Sbjct: 72 FSGDNRAGIERTLHRISAIRNRTGKV-IGLTCRVGRAVSGTISIIRDLV-----------ESGKSILFLGPPGVGKTTKLREMARVLADEMGKRVIVIDTSNEIAGDGDVPHPAIGRARRMQVSHPDAQHAVMIEAVENHTPEAIVIDEIGTEQESAAARTIAERGVVLIGTAHGNALENLLKNPTMVDLVGGIQTVTLGDDEAR-RRGTQKTVLERATEPTF 281
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A2K3DQW5_CHLRE (AAA domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DQW5_CHLRE) HSP 1 Score: 212 bits (539), Expect = 5.030e-60 Identity = 116/227 (51.10%), Postives = 140/227 (61.67%), Query Frame = 1 Query: 10 SDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPV------SVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 SD R C PGTLHR+ + A +GLTYRLGRHV L D++ +A R+ P S+LLLG PGAGKTT+LR +A L + G VVDTS EIAGG PH CIG ARR +V +RDQ AV++E VQNH P+V++VDE+G+ +EA A RSISQRGV +VATAHG L +M NPDL LVGG+Q V LG KT ER G P F Sbjct: 532 SDGRCCPPGTLHRISAVREPGSGAVVGLTYRLGRHVPGVAAALADVLSDLAGRGRGRDGEPNAASMAGSLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDTVPHSCIGSARRLKVGRRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTRTERRGEPTF 758
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A838J3F4_9CHLR (AAA family ATPase (Fragment) n=1 Tax=Ktedonobacteraceae bacterium TaxID=2740538 RepID=A0A838J3F4_9CHLR) HSP 1 Score: 201 bits (511), Expect = 5.990e-60 Identity = 112/220 (50.91%), Postives = 148/220 (67.27%), Query Frame = 1 Query: 13 DNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 DNR + TLHR+ + N +GLT R+GR V S L+ D+V + GQ S+L+LG PG GKTT+LR++A +L + ++ VVDTS EIAG G PHP IGRARR QV + +QHAV++E V+NH P+VI++DEIGT EA A R+I++RGV +VATAHG +LG+L+ NP L LVGGIQ VTLG E R R+ +QK++QER P F Sbjct: 78 DNRAGIERTLHRISAMRNRKGRV-VGLTCRIGRAVLGSIALIRDIVEQ-----GQ------SILILGRPGVGKTTLLREIARVLADEANKRVVVVDTSNEIAGDGDIPHPGIGRARRMQVSRTSEQHAVMIEAVENHMPQVIVIDEIGTELEAGAARTIAERGVQLVATAHGNSLGNLLVNPTLSDLVGGIQTVTLGDEEAR-RRHTQKSIQERKSLPTF 284
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Match: A0A6I4ZHZ3_9CHLR (AAA family ATPase n=3 Tax=Bacteria TaxID=2 RepID=A0A6I4ZHZ3_9CHLR) HSP 1 Score: 206 bits (523), Expect = 6.600e-60 Identity = 115/224 (51.34%), Postives = 151/224 (67.41%), Query Frame = 1 Query: 1 PWTSDNRYCMPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQRNKRPVSVLLLGPPGAGKTTILRQMAALLGETFGRQTAVVDTSLEIAGGGRTPHPCIGRARRFQVEKRDQQHAVLVEVVQNHSPKVIIVDEIGTPKEAHAVRSISQRGVAMVATAHGKTLGDLMKNPDLVRLVGGIQAVTLGAGEVRERKASQKTVQERAGAPCF 672 P+ +DNR + TLHR+ + N +GLT R+GR V + R++ D+V R ES +LLLG PG GKTT+LR +A +L + G++ +VDTS EIAG G PHP IG ARR QV DQQHAV++E V+NH P+VII+DEIGT EA+A R+I++RGV +VATAHG TL +L++NP L L+GGIQ+VTLG E R R+ +QKTV ER P F Sbjct: 74 PFGADNRAGIERTLHRISAIRNRTGKV-VGLTVRVGRAVYGTIRIIEDIV-RTGES----------ILLLGKPGVGKTTMLRDVARVLADDAGKRVVIVDTSNEIAGDGDIPHPGIGSARRMQVPSPDQQHAVMIEAVENHMPEVIIIDEIGTELEANAARTIAERGVQLVATAHGNTLENLVQNPTLSDLIGGIQSVTLGDIEARRRR-TQKTVLERKAPPTF 284 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98578.22697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98578.22697.1 >prot_M-pyrifera_M_contig98578.22697.1 ID=prot_M-pyrifera_M_contig98578.22697.1|Name=mRNA_M-pyrifera_M_contig98578.22697.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp MPGTLHRVCRLLNTADNATIGLTYRLGRHVGDSNRLLGDLVHRVAESLGQback to top mRNA from alignment at M-pyrifera_M_contig98578:3..674- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98578.22697.1 ID=mRNA_M-pyrifera_M_contig98578.22697.1|Name=mRNA_M-pyrifera_M_contig98578.22697.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig98578:3..674- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98578:3..674- >mRNA_M-pyrifera_M_contig98578.22697.1 ID=mRNA_M-pyrifera_M_contig98578.22697.1|Name=mRNA_M-pyrifera_M_contig98578.22697.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig98578:3..674- (Macrocystis pyrifera P11B4 male)back to top |