mRNA_M-pyrifera_M_contig98575.22696.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A7S4HJI3_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HJI3_9EUKA) HSP 1 Score: 110 bits (276), Expect = 2.170e-29 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNR-TQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSLAV 312 A++VAMGAFGAH LK R + +P + +W+TAA Y + HSV LCL++ +PR + GY S GI LFSGS+Y LVL++ K LG +TPIGG+C+I W+SLA+ Sbjct: 15 AISVAMGAFGAHGLKKRYSNNPQKVASWNTAAHYQLIHSV----VLCLLSFTPRTSPLTGYLLSTGITLFSGSIYLLVLTEWKLLGPVTPIGGLCLIASWISLAI 115
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A067CZ45_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZ45_SAPPC) HSP 1 Score: 109 bits (273), Expect = 6.970e-29 Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSL 306 A AV +GAFGAH LK+R DP ++KTWDT A YH+ HS+ AL V S R P++AG S GI+ FSGSLYA+VL+ K+LG ITP+GG+ + GWLSL Sbjct: 24 ATAVLLGAFGAHGLKSRVSDPKLLKTWDTGAHYHLVHSL----ALLAVPFS-RRPNLAGGLISTGIVFFSGSLYAIVLTDHKSLGMITPMGGLMFVAGWLSL 120
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A6G0XE60_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE60_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.990e-28 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSL 306 A A+A GAFGAH+LKN +D ++KTW+T A YH+ HSV AL V S R P++ G + G+LLFSGSLY++VL+Q K LG ITPIGG+ MI GWL+L Sbjct: 24 ATAIAFGAFGAHALKNYVKDEKLLKTWETGAHYHLLHSV----ALLAVPFS-RRPNLVGGLLTTGVLLFSGSLYSIVLTQKKNLGIITPIGGVAMIAGWLAL 120
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A024UJM9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJM9_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.990e-28 Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLS 303 A AVA GAFGAH+L++R ++P IKTW+TA+ YH+ HSV AL V L+ R P++AG F +AGI+LFSGSLY LVLS LG ITP GG+ I GWL+ Sbjct: 26 AAAVAFGAFGAHALQSRVKNPKRIKTWETASHYHLIHSV----ALLAVPLA-RRPNVAGGFLTAGIVLFSGSLYTLVLSDQAKLGIITPFGGLAFIAGWLA 121
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A0F2LZ48_SPOSC (Membrane protein n=2 Tax=Sporothrix schenckii TaxID=29908 RepID=A0A0F2LZ48_SPOSC) HSP 1 Score: 107 bits (268), Expect = 1.440e-27 Identity = 58/104 (55.77%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLS--QVKALGAITPIGGMCMIIGWLSL 306 A AVA+GAFGAH LKNR DP + TW TAA Y +AHSV +AA HP +A F+ G+ LFSGS+YALVL + KALG +TP+GG+C+I+GWLSL Sbjct: 64 ATAVALGAFGAHGLKNRVSDPAKLATWSTAAHYQLAHSVAMLAAR-------GHP-VASSLFATGMTLFSGSIYALVLDPERFKALGPVTPVGGLCLILGWLSL 159
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: UPI0006450D0A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450D0A) HSP 1 Score: 105 bits (262), Expect = 2.910e-27 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSLAV 312 ALA+ GAFG H LK+ +DP + TW TAA YH+ HSV AL LV S +H +IAG G +LFSGSLY L LS K LGA+TP+GG+ MI GWL+LA+ Sbjct: 17 ALAICTGAFGGHGLKDHVKDPKKLDTWKTAANYHLIHSV----ALMLVPFS-KHHAIAGPLLLGGTVLFSGSLYVLTLSDKKVLGAVTPLGGLAMIGGWLALAI 115
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A6N2D341_9DELT (DUF423 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D341_9DELT) HSP 1 Score: 105 bits (263), Expect = 3.050e-27 Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSL 306 AL VA+GAFGAH L+N +DP ++ TW+TAA+YH+ H++ AL LV P P AG+ G ++FSGSLY LVLS V+ LGAITP+GG +I GWL L Sbjct: 25 ALGVALGAFGAHGLRNLIEDPQLLVTWETAARYHVFHAL----ALGLVAAHPARPHRAGWLLLTGTVIFSGSLYLLVLSGVRWLGAITPLGGAALIAGWLIL 122
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A225W8S8_9STRA (Membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8S8_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.080e-27 Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSL 306 A AV +GAFGAH LKN +DP ++K W+TAA Y + HSV + LVT + P +AG + G LLFSGSLYA+ L+Q K LG +TPIGG+ ++ GWL+L Sbjct: 22 ASAVLLGAFGAHGLKNHVKDPQLLKNWETAAHYQLIHSV-----VLLVTPLCKRPGLAGTLITTGTLLFSGSLYAMTLTQEKKLGIVTPIGGVAIVAGWLAL 118
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A8K1CAR7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAR7_PYTOL) HSP 1 Score: 105 bits (262), Expect = 3.080e-27 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSL 306 A AVA+GAFGAH L+ R +DP M+K W+TAA YH+ HSV +AA LS R P + G + G LLFSGSLY +VL+ + LG ITPIGG+ +I GWL+L Sbjct: 22 ATAVALGAFGAHGLQTRVKDPKMLKNWETAAHYHLIHSVVLLAA----PLSKR-PGLTGGLITTGTLLFSGSLYTMVLTNERKLGMITPIGGVAIIAGWLAL 118
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Match: A0A485KYZ3_9STRA (Aste57867_13786 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYZ3_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.450e-27 Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 1 ALAVAMGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPSIAGYFFSAGILLFSGSLYALVLSQVKALGAITPIGGMCMIIGWLSL 306 A AV +GAFGAH L+ R +DP ++K WDTAA YH+ HS+ AL +V + R P++ G + GI+ FSGSLY LVL++ K LG ITP+GG+ I GWL+L Sbjct: 26 ATAVVLGAFGAHGLQTRVKDPKLLKNWDTAAHYHLMHSI----ALLVVPFT-RRPNVVGGLLTTGIVFFSGSLYTLVLTEQKKLGMITPLGGLAFIAGWLAL 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98575.22696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98575.22696.1 >prot_M-pyrifera_M_contig98575.22696.1 ID=prot_M-pyrifera_M_contig98575.22696.1|Name=mRNA_M-pyrifera_M_contig98575.22696.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp MGAFGAHSLKNRTQDPYMIKTWDTAAQYHMAHSVETIAALCLVTLSPRHPback to top mRNA from alignment at M-pyrifera_M_contig98575:12..697- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98575.22696.1 ID=mRNA_M-pyrifera_M_contig98575.22696.1|Name=mRNA_M-pyrifera_M_contig98575.22696.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=686bp|location=Sequence derived from alignment at M-pyrifera_M_contig98575:12..697- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98575:12..697- >mRNA_M-pyrifera_M_contig98575.22696.1 ID=mRNA_M-pyrifera_M_contig98575.22696.1|Name=mRNA_M-pyrifera_M_contig98575.22696.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig98575:12..697- (Macrocystis pyrifera P11B4 male)back to top |