mRNA_M-pyrifera_M_contig98011.22572.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A358FY61_9ACTN (Flagellar motor switch protein FliN n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358FY61_9ACTN) HSP 1 Score: 117 bits (293), Expect = 2.430e-30 Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 1 Query: 121 FQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGR 402 F E + DG+LS+GVLR VPLEV+AELG ++++ EILQ GS+IELDRTAG+P+DVV NGS++ARGEVVVI +EYG+R+TEI+GR Sbjct: 110 FASEPHLTPTTGPSDGVLSIGVLRHVPLEVAAELGRAKVTMEEILQYGPGSIIELDRTAGSPVDVVVNGSMVARGEVVVIGEEYGVRVTEILGR 203
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A4Q7NW53_9ACTN (Flagellar motor switch protein FliN/FliY n=1 Tax=Motilibacter rhizosphaerae TaxID=598652 RepID=A0A4Q7NW53_9ACTN) HSP 1 Score: 105 bits (261), Expect = 4.400e-25 Identity = 52/79 (65.82%), Postives = 67/79 (84.81%), Query Frame = 1 Query: 178 LGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDA 414 L +LR+V +EV+AELG TR++V E+L LT GSV+ELDR AG+P D++ NG+LIARGEVVV+D+EYGIRITE+VG DA Sbjct: 168 LELLRDVVMEVTAELGRTRMTVRELLSLTPGSVVELDRAAGSPADLLVNGTLIARGEVVVVDEEYGIRITELVGPGADA 246
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A094ITD5_9GAMM (Flagellar motor switch protein FliN n=1 Tax=Pseudidiomarina salinarum TaxID=435908 RepID=A0A094ITD5_9GAMM) HSP 1 Score: 101 bits (251), Expect = 8.560e-25 Identity = 50/102 (49.02%), Postives = 75/102 (73.53%), Query Frame = 1 Query: 91 SAPSLDEDLPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIV 396 +AP+ D F + +DN AA G + L ++ ++P+++S ELG TR+++ ++L+L GSV+ELD AG P+D++ NG LIA+GEVVV+DD+YGIRITEIV Sbjct: 28 AAPTSDSQKVF---KPLDNTAAAGGTMNDLDIIMDIPVKLSVELGRTRITIKQLLELAQGSVVELDGLAGEPMDILINGYLIAQGEVVVLDDKYGIRITEIV 126
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A346XUG4_9ACTN (Flagellar motor switch protein FliN n=1 Tax=Euzebya pacifica TaxID=1608957 RepID=A0A346XUG4_9ACTN) HSP 1 Score: 105 bits (262), Expect = 1.840e-24 Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 151 AAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDA 414 A G G S+ +L +V + V+AELG T+L+V ++L LT GS++ELDR AG+P+DVV NG+LIARGEVVVID+E+GIRITEI+G V A Sbjct: 256 ALPGQGQSSMSLLGDVEMGVTAELGRTQLTVRDVLNLTPGSIVELDRAAGSPVDVVVNGTLIARGEVVVIDEEFGIRITEILGAVEQA 343
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: UPI00196B79E3 (flagellar motor switch protein FliN n=1 Tax=Euzebya rosea TaxID=2052804 RepID=UPI00196B79E3) HSP 1 Score: 105 bits (262), Expect = 2.000e-24 Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 151 AAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDA 414 A G G S+ +L +V + V+AELG T+L+V ++L LT GS++ELDR AG+P+DVV NG+LIARGEVVVID+E+GIRITEI+G V A Sbjct: 262 ALPGQGQSSMSLLGDVEMGVTAELGRTQLTVRDVLNLTPGSIVELDRAAGSPVDVVVNGTLIARGEVVVIDEEFGIRITEILGAVEQA 349
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: U5WE98_9ACTN (Flagellar motor switch protein FliN n=6 Tax=Micromonosporaceae TaxID=28056 RepID=U5WE98_9ACTN) HSP 1 Score: 102 bits (255), Expect = 3.280e-24 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 79 LVTASAPSLDEDLPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIV 396 L A +P + P + RR D+ M GL +L +V +EVSAELG TR+SV E+L LT G+++ELDR AG+P D++ NG LIARGEVVVID+ +GIRITEI+ Sbjct: 140 LAMALSPWPSDGAPAGVARRGDSAGPMRGGL---DMLHDVEMEVSAELGRTRMSVRELLSLTPGAIVELDRAAGSPADLLVNGRLIARGEVVVIDENFGIRITEII 242
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A0D8HFH8_9ACTN (Flagellar motor switch protein FliN n=1 Tax=Acidithrix ferrooxidans TaxID=1280514 RepID=A0A0D8HFH8_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 1.350e-23 Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 1 Query: 106 DEDLPFQMERRMDNDAAMGDGLLS----LGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGR 402 D F + N+ +G L S LGV++ V +E++ ELG ++SV E+L LT G V+ELDR A +P+DV+ NG+L+AR EVVV++DE+GIRITE+VGR Sbjct: 3 DISTDFSDTNQNGNENFLGKRLESDLGPLGVIQNVEMEITVELGRAKMSVRELLSLTSGDVVELDRLATSPVDVLVNGTLVARAEVVVVEDEFGIRITEVVGR 105
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A525C0N6_9GAMM (Flagellar motor switch protein FliN n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A525C0N6_9GAMM) HSP 1 Score: 98.2 bits (243), Expect = 1.580e-23 Identity = 47/110 (42.73%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 85 TASAPSLDED------LPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIV 396 TA +D D P ME + A GD ++L V+ ++P+++S E+G TR+S+ +LQL GS++ELDR AG P+DV+ NG+LIA GEVVV+++ +GIR+T+++ Sbjct: 23 TAEGDEIDPDEIMANVSPAPMENLVSETVAAGDEDVNLNVILDIPVDLSMEIGRTRISIRNLLQLNQGSIVELDRLAGEPLDVMVNGTLIAHGEVVVVNERFGIRLTDVI 132
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A420XTQ3_9ACTN (Flagellar motor switch protein FliN/FliY n=1 Tax=Motilibacter peucedani TaxID=598650 RepID=A0A420XTQ3_9ACTN) HSP 1 Score: 100 bits (250), Expect = 1.840e-23 Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 160 GDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVG 399 G L +LR+V +EV+AELG TR++V E+L L+ G+V+ELDR AG+P D++ NG+LIARGEVVV+D+EYGIRITE+VG Sbjct: 162 GGRAAGLELLRDVEMEVTAELGRTRMTVRELLSLSPGAVVELDRAAGSPADLLVNGTLIARGEVVVVDEEYGIRITELVG 241
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: UPI001BC9287F (flagellar motor switch protein FliN n=1 Tax=Bacillus sp. FJAT-29953 TaxID=1895007 RepID=UPI001BC9287F) HSP 1 Score: 97.1 bits (240), Expect = 2.660e-23 Identity = 48/102 (47.06%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 97 PSLDEDLPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGR 402 P + +DLP + ++R +D+ ++L +L ++ LE+ ELG T+ + EIL+LT GS+IELDR +G P+DV+ NG ++A+GEVVVIDD +GIRITEI+ + Sbjct: 25 PFIFQDLPDEPQKRETDDS------VNLDLLMDISLELVVELGRTKKKINEILELTQGSIIELDRVSGEPVDVLINGKIVAKGEVVVIDDYFGIRITEILNK 120 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98011.22572.1 >prot_M-pyrifera_M_contig98011.22572.1 ID=prot_M-pyrifera_M_contig98011.22572.1|Name=mRNA_M-pyrifera_M_contig98011.22572.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp VGQGAPGAASGSVLLVAGPNGPLLVGLVTASAPSLDEDLPFQMERRMDNDback to top mRNA from alignment at M-pyrifera_M_contig98011:73..492- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98011.22572.1 ID=mRNA_M-pyrifera_M_contig98011.22572.1|Name=mRNA_M-pyrifera_M_contig98011.22572.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig98011:73..492- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98011:73..492- >mRNA_M-pyrifera_M_contig98011.22572.1 ID=mRNA_M-pyrifera_M_contig98011.22572.1|Name=mRNA_M-pyrifera_M_contig98011.22572.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig98011:73..492- (Macrocystis pyrifera P11B4 male)back to top |