mRNA_M-pyrifera_M_contig97703.22500.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A2G9TFD8_TELCI (Uncharacterized protein (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9TFD8_TELCI) HSP 1 Score: 183 bits (465), Expect = 5.040e-54 Identity = 117/193 (60.62%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 67 DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSM--QGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 639 DL ++G+A+ I+ ++LN +DSVSGQTV DPKGYLTDL+SM Q GGD I+DVK+AR LL+S TNP H PAWI +AR+EE GKL AR LI GCEK ED+WLEA RLH PETAK I+A AV +P SV++WM ++E + AKK XXXXXXXXXXXXXXXXXX P+DAR+LL AVEC Sbjct: 17 DLIKIGQARNKIMDIKLNQVSDSVSGQTVVDPKGYLTDLQSMIPQYGGD--INDVKKARMLLKSVRETNPKHPPAWIASARLEEVVGKLQVARHLIMEGCEKNKKSEDMWLEAVRLHPPETAKAIVANAVRAMPHSVRLWMKTAEIETDLKAKKKVFRKXXXXXXXXXXXXXXXXXXEEPDDARVLLTRAVEC 207
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A2R7X8Q1_ONCFA (Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7X8Q1_ONCFA) HSP 1 Score: 186 bits (472), Expect = 3.030e-53 Identity = 126/216 (58.33%), Postives = 155/216 (71.76%), Query Frame = 1 Query: 28 GIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVECXXXXXXXXLALA 675 G+ TP T DL +MG+A+ +++++LN +DSV GQTV DPKGYLTDL+SM DI+D+K+AR LL+S TNP H PAWI +AR+EE GKL AR LI GCE+ ED+WLEAARL P+TAK ++A+A+ +P SV+IW+ A DLE E AK+ XXXXXXXXXXXXXXXXXXXXXXX PEDARILL+ AVEC LALA Sbjct: 218 GMLTP----TGDLDLRKMGQARNNLMNVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPSYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKLQAARNLIMKGCEENQQSEDLWLEAARLQPPDTAKRVIAQAIRYIPTSVRIWIRAADLETEIKAKRRXXXXXXXXXXXXXXXXXXXXXXXDPEDARILLSRAVECCPTSVDLWLALA 429
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A507F249_9FUNG (PRP1_N domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507F249_9FUNG) HSP 1 Score: 191 bits (484), Expect = 3.150e-52 Identity = 92/174 (52.87%), Postives = 123/174 (70.69%), Query Frame = 1 Query: 1 VDVREQQFAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKK 522 +D ++Q G+ATP A + D Q G+A+ +L ++L+ +DSV+GQT+ DPKGYLTDL S+ D +ISD+K+AR LL+S + TNP H P WI AAR+EE AGKLG AR+ I GCE+ EDVWLE+ARL+ E AKVILA+A+ +P+SVK+WM A DLE + AKK Sbjct: 194 LDAKQQLLGGLATPATADGTMTDFVQFGQARDKVLGLKLDQISDSVTGQTIIDPKGYLTDLNSIVVKTDAEISDIKKARTLLKSVITTNPKHAPGWIAAARLEEVAGKLGAARETITKGCEECPTSEDVWLESARLNTAENAKVILAQAIRHVPQSVKVWMKACDLETDAKAKK 367
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: Q1PQ57_DROMI (Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Drosophila miranda TaxID=7229 RepID=Q1PQ57_DROMI) HSP 1 Score: 181 bits (460), Expect = 4.220e-52 Identity = 117/206 (56.80%), Postives = 149/206 (72.33%), Query Frame = 1 Query: 28 GIATPLNAATPVADLT--QMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 639 G+ATP TP DL ++G+A+ T+++++L+ +DSV+GQTV DPKGYLTDL+SM DI+D+K+AR LL+S TNP H PAWI +AR+EE GK+ AR LI GCE ED+WLEAARL P+TAK ++A+A +P SV+IW+ A DLE E AK+ XXXXXXXXXXXXXXXXXXX P+DARILL+ AVEC Sbjct: 130 GVATP-GMLTPTGDLDLRKIGQARNTLMNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEINAQSEDLWLEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKRRVFRKXXXXXXXXXXXXXXXXXXXNPDDARILLSRAVEC 334
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A0V1JUI6_TRIPS (Pre-mRNA-processing factor 6 (Fragment) n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1JUI6_TRIPS) HSP 1 Score: 185 bits (469), Expect = 4.370e-52 Identity = 116/203 (57.14%), Postives = 148/203 (72.91%), Query Frame = 1 Query: 22 FAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXA 630 +GI+T N++T + DL ++G+A+ I+ M+LN +DSVSGQTV DPKGYLTDL+SM DI+D+K+AR LL+S TNP H PAWI +AR+EE GKL AR +I +GCE ED+WLEAARLH PETA+ I+A+A LP+SV++WM A +LE ++ KK XXXXXXXXXXXXXXXXX PEDARILL+ A Sbjct: 260 MSGIST--NSSTDL-DLRKIGQARNQIMDMKLNQASDSVSGQTVVDPKGYLTDLQSMIPSYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVVGKLQVARNIIMNGCEVCHQSEDIWLEAARLHPPETARAIIAQAARHLPQSVRVWMRAAELESDSKLKKKVLRKGLXXXXXXXXXXXXXXXXXEPEDARILLSRA 459
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: D8RJT6_SELML (PRP1_N domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RJT6_SELML) HSP 1 Score: 189 bits (481), Expect = 9.560e-52 Identity = 117/221 (52.94%), Postives = 149/221 (67.42%), Query Frame = 1 Query: 1 VDVREQQFAGIATPLNAA--------TPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 639 +D R + AG+ A TPV DLT +G+ + T+LS++L+ +DSVSG TV DPKGYLTDLKSM+ D +ISD+K+AR LL+S ++TNP H P WI AAR+EE AGK+ AR I+ GCE+ +EDVWLEA RL + + AK ++A AV +P SVK+WM A LE EN+AK XXXXXXXXXXXXXXX ++ARILLA A EC Sbjct: 225 LDPRSRAAAGVGGAATAGGAETPWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVIQTNPKHAPGWIAAARLEEVAGKIAAARSFIQKGCEECPKNEDVWLEACRLASGDAAKKVIAMAVKSIPTSVKLWMAAARLEVENAAKSRVLRKGLEFXXXXXXXXXXXXXXXNEDEARILLARATEC 445
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A3P7LME1_STRVU (Pre-mRNA-processing factor 6 n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7LME1_STRVU) HSP 1 Score: 186 bits (471), Expect = 2.040e-51 Identity = 119/193 (61.66%), Postives = 143/193 (74.09%), Query Frame = 1 Query: 67 DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSM--QGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 639 DL ++G+A+ I+ ++LN +DSV+GQTV DPKGYLTDL+SM Q GGD I+DVK+AR LL+S TNP H PAWI +AR+EE GKL AR LI GCEK ED+WLEA RLH PETAK I+A AV +P SV+IWM A ++E + AKK XXXXXXXXXXXXXXXXXXX P+DAR+LL AVEC Sbjct: 382 DLIKIGQARNKIMDIKLNQVSDSVTGQTVVDPKGYLTDLQSMIPQYGGD--INDVKKARMLLKSVRETNPKHPPAWIASARLEEVVGKLQVARHLIMEGCEKNKKSEDIWLEAVRLHPPETAKAIVANAVRAMPHSVRIWMKAAEIETDAKAKKKVFRKXXXXXXXXXXXXXXXXXXXEPDDARVLLTRAVEC 572
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A507BY91_9FUNG (PRP1_N domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BY91_9FUNG) HSP 1 Score: 188 bits (478), Expect = 2.200e-51 Identity = 93/174 (53.45%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 1 VDVREQQFAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKK 522 ++ R+Q G+ATP++ D Q G+A+ +L ++L+ +DSVSGQT DPKGYLTDL S+Q D +ISD+K+AR LL+S TNP H P WI AAR+EE AGKL AR+++ GCE+ EDVWLEAARL+ + AKVILA AV LP+SVKIWM A LE E KK Sbjct: 207 INARDQAMGGVATPVDGTK--TDFVQFGQARDKVLGLKLDQASDSVSGQTTIDPKGYLTDLSSVQVKSDAEISDIKKARTLLRSVTTTNPKHSPGWIAAARLEEVAGKLALAREIMAKGCEECSKSEDVWLEAARLNTTDNAKVILANAVRSLPQSVKIWMRAASLENEVKGKK 378
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A7R9XIK8_9CRUS (Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9XIK8_9CRUS) HSP 1 Score: 187 bits (476), Expect = 4.350e-51 Identity = 121/213 (56.81%), Postives = 148/213 (69.48%), Query Frame = 1 Query: 22 FAGIATPLNAATPVA-------DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 639 F G TP+ + TP DL ++G+A+ T++ ++LN +DSVSGQTV DPKGYLTDL+SM DI D+K+AR LL+S TNP H PAWI +AR+EE GK+ TAR LI GCE ED+WLEAARL P+TAK +A+AV LP V++W+ A DLE E AKK XXXXXXXXXXXXXXXXXXX PEDARILL+ +VEC Sbjct: 223 FPGAGTPVGSVTPGMLTPTGDLDLRKIGQARNTLMDIKLNQVSDSVSGQTVVDPKGYLTDLQSMIPTYGGDIGDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKIQTARNLIMKGCELCPKSEDIWLEAARLQPPDTAKAAIAQAVRHLPDCVRLWIKAADLETELKAKKRVFRKXXXXXXXXXXXXXXXXXXXDPEDARILLSRSVEC 435
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A016VLF0_9BILA (Pre-mRNA-processing factor 6 n=8 Tax=Strongylida TaxID=6308 RepID=A0A016VLF0_9BILA) HSP 1 Score: 187 bits (476), Expect = 4.730e-51 Identity = 121/214 (56.54%), Postives = 147/214 (68.69%), Query Frame = 1 Query: 13 EQQFAGIATPLNAATPVA---DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSM--QGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 639 + G T +N+ DL ++G+A+ I+ ++LN +DSV+GQTV DPKGYLTDL+SM Q GGD I+DVK+AR LL+S TNP H PAWI +AR+EE GKL AR LI GCEK ED+WLEA RLH PETAK I+A AV +P SV+IWM A D+E + AKK XXXXXXXXXXXXXXXXX P+DAR+LL AVEC Sbjct: 254 QSSLGGWKTGINSGISTGHDLDLIKIGQARNKIMDIKLNQVSDSVTGQTVVDPKGYLTDLQSMIPQYGGD--INDVKKARMLLKSVRETNPKHPPAWIASARLEEVVGKLQVARHLIMEGCEKNKKSEDIWLEAVRLHPPETAKAIVANAVRAMPHSVRIWMKAADIETDMKAKKKVFRKXXXXXXXXXXXXXXXXXLEEPDDARVLLTRAVEC 465 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97703.22500.1 >prot_M-pyrifera_M_contig97703.22500.1 ID=prot_M-pyrifera_M_contig97703.22500.1|Name=mRNA_M-pyrifera_M_contig97703.22500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp VDVREQQFAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTback to top mRNA from alignment at M-pyrifera_M_contig97703:3..704+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97703.22500.1 ID=mRNA_M-pyrifera_M_contig97703.22500.1|Name=mRNA_M-pyrifera_M_contig97703.22500.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig97703:3..704+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97703:3..704+ >mRNA_M-pyrifera_M_contig97703.22500.1 ID=mRNA_M-pyrifera_M_contig97703.22500.1|Name=mRNA_M-pyrifera_M_contig97703.22500.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1404bp|location=Sequence derived from alignment at M-pyrifera_M_contig97703:3..704+ (Macrocystis pyrifera P11B4 male)back to top |