prot_M-pyrifera_M_contig97703.22500.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97703.22500.1
Unique Nameprot_M-pyrifera_M_contig97703.22500.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length234
Homology
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A2G9TFD8_TELCI (Uncharacterized protein (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9TFD8_TELCI)

HSP 1 Score: 183 bits (465), Expect = 5.040e-54
Identity = 117/193 (60.62%), Postives = 141/193 (73.06%), Query Frame = 0
Query:   23 DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSM--QGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 213
            DL ++G+A+  I+ ++LN  +DSVSGQTV DPKGYLTDL+SM  Q GGD  I+DVK+AR LL+S   TNP H PAWI +AR+EE  GKL  AR LI  GCEK    ED+WLEA RLH PETAK I+A AV  +P SV++WM   ++E +  AKK     XXXXXXXXXXXXXXXXXX  P+DAR+LL  AVEC
Sbjct:   17 DLIKIGQARNKIMDIKLNQVSDSVSGQTVVDPKGYLTDLQSMIPQYGGD--INDVKKARMLLKSVRETNPKHPPAWIASARLEEVVGKLQVARHLIMEGCEKNKKSEDMWLEAVRLHPPETAKAIVANAVRAMPHSVRLWMKTAEIETDLKAKKKVFRKXXXXXXXXXXXXXXXXXXEEPDDARVLLTRAVEC 207          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A2R7X8Q1_ONCFA (Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7X8Q1_ONCFA)

HSP 1 Score: 186 bits (472), Expect = 3.030e-53
Identity = 126/216 (58.33%), Postives = 155/216 (71.76%), Query Frame = 0
Query:   10 GIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVECXXXXXXXXLALA 225
            G+ TP    T   DL +MG+A+  +++++LN  +DSV GQTV DPKGYLTDL+SM      DI+D+K+AR LL+S   TNP H PAWI +AR+EE  GKL  AR LI  GCE+    ED+WLEAARL  P+TAK ++A+A+  +P SV+IW+ A DLE E  AK+ XXXXXXXXXXXXXXXXXXXXXXX PEDARILL+ AVEC        LALA
Sbjct:  218 GMLTP----TGDLDLRKMGQARNNLMNVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPSYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKLQAARNLIMKGCEENQQSEDLWLEAARLQPPDTAKRVIAQAIRYIPTSVRIWIRAADLETEIKAKRRXXXXXXXXXXXXXXXXXXXXXXXDPEDARILLSRAVECCPTSVDLWLALA 429          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A507F249_9FUNG (PRP1_N domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507F249_9FUNG)

HSP 1 Score: 191 bits (484), Expect = 3.150e-52
Identity = 92/174 (52.87%), Postives = 123/174 (70.69%), Query Frame = 0
Query:    1 VDVREQQFAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKK 174
            +D ++Q   G+ATP  A   + D  Q G+A+  +L ++L+  +DSV+GQT+ DPKGYLTDL S+    D +ISD+K+AR LL+S + TNP H P WI AAR+EE AGKLG AR+ I  GCE+    EDVWLE+ARL+  E AKVILA+A+  +P+SVK+WM A DLE +  AKK
Sbjct:  194 LDAKQQLLGGLATPATADGTMTDFVQFGQARDKVLGLKLDQISDSVTGQTIIDPKGYLTDLNSIVVKTDAEISDIKKARTLLKSVITTNPKHAPGWIAAARLEEVAGKLGAARETITKGCEECPTSEDVWLESARLNTAENAKVILAQAIRHVPQSVKVWMKACDLETDAKAKK 367          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: Q1PQ57_DROMI (Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Drosophila miranda TaxID=7229 RepID=Q1PQ57_DROMI)

HSP 1 Score: 181 bits (460), Expect = 4.220e-52
Identity = 117/206 (56.80%), Postives = 149/206 (72.33%), Query Frame = 0
Query:   10 GIATPLNAATPVADLT--QMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 213
            G+ATP    TP  DL   ++G+A+ T+++++L+  +DSV+GQTV DPKGYLTDL+SM      DI+D+K+AR LL+S   TNP H PAWI +AR+EE  GK+  AR LI  GCE     ED+WLEAARL  P+TAK ++A+A   +P SV+IW+ A DLE E  AK+     XXXXXXXXXXXXXXXXXXX P+DARILL+ AVEC
Sbjct:  130 GVATP-GMLTPTGDLDLRKIGQARNTLMNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEINAQSEDLWLEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKRRVFRKXXXXXXXXXXXXXXXXXXXNPDDARILLSRAVEC 334          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A0V1JUI6_TRIPS (Pre-mRNA-processing factor 6 (Fragment) n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1JUI6_TRIPS)

HSP 1 Score: 185 bits (469), Expect = 4.370e-52
Identity = 116/203 (57.14%), Postives = 148/203 (72.91%), Query Frame = 0
Query:    8 FAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXA 210
             +GI+T  N++T + DL ++G+A+  I+ M+LN  +DSVSGQTV DPKGYLTDL+SM      DI+D+K+AR LL+S   TNP H PAWI +AR+EE  GKL  AR +I +GCE     ED+WLEAARLH PETA+ I+A+A   LP+SV++WM A +LE ++  KK       XXXXXXXXXXXXXXXXX PEDARILL+ A
Sbjct:  260 MSGIST--NSSTDL-DLRKIGQARNQIMDMKLNQASDSVSGQTVVDPKGYLTDLQSMIPSYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVVGKLQVARNIIMNGCEVCHQSEDIWLEAARLHPPETARAIIAQAARHLPQSVRVWMRAAELESDSKLKKKVLRKGLXXXXXXXXXXXXXXXXXEPEDARILLSRA 459          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: D8RJT6_SELML (PRP1_N domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RJT6_SELML)

HSP 1 Score: 189 bits (481), Expect = 9.560e-52
Identity = 117/221 (52.94%), Postives = 149/221 (67.42%), Query Frame = 0
Query:    1 VDVREQQFAGIATPLNAA--------TPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 213
            +D R +  AG+     A         TPV DLT +G+ + T+LS++L+  +DSVSG TV DPKGYLTDLKSM+   D +ISD+K+AR LL+S ++TNP H P WI AAR+EE AGK+  AR  I+ GCE+   +EDVWLEA RL + + AK ++A AV  +P SVK+WM A  LE EN+AK          XXXXXXXXXXXXXXX  ++ARILLA A EC
Sbjct:  225 LDPRSRAAAGVGGAATAGGAETPWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVIQTNPKHAPGWIAAARLEEVAGKIAAARSFIQKGCEECPKNEDVWLEACRLASGDAAKKVIAMAVKSIPTSVKLWMAAARLEVENAAKSRVLRKGLEFXXXXXXXXXXXXXXXNEDEARILLARATEC 445          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A3P7LME1_STRVU (Pre-mRNA-processing factor 6 n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7LME1_STRVU)

HSP 1 Score: 186 bits (471), Expect = 2.040e-51
Identity = 119/193 (61.66%), Postives = 143/193 (74.09%), Query Frame = 0
Query:   23 DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSM--QGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 213
            DL ++G+A+  I+ ++LN  +DSV+GQTV DPKGYLTDL+SM  Q GGD  I+DVK+AR LL+S   TNP H PAWI +AR+EE  GKL  AR LI  GCEK    ED+WLEA RLH PETAK I+A AV  +P SV+IWM A ++E +  AKK     XXXXXXXXXXXXXXXXXXX P+DAR+LL  AVEC
Sbjct:  382 DLIKIGQARNKIMDIKLNQVSDSVTGQTVVDPKGYLTDLQSMIPQYGGD--INDVKKARMLLKSVRETNPKHPPAWIASARLEEVVGKLQVARHLIMEGCEKNKKSEDIWLEAVRLHPPETAKAIVANAVRAMPHSVRIWMKAAEIETDAKAKKKVFRKXXXXXXXXXXXXXXXXXXXEPDDARVLLTRAVEC 572          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A507BY91_9FUNG (PRP1_N domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BY91_9FUNG)

HSP 1 Score: 188 bits (478), Expect = 2.200e-51
Identity = 93/174 (53.45%), Postives = 119/174 (68.39%), Query Frame = 0
Query:    1 VDVREQQFAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKK 174
            ++ R+Q   G+ATP++      D  Q G+A+  +L ++L+  +DSVSGQT  DPKGYLTDL S+Q   D +ISD+K+AR LL+S   TNP H P WI AAR+EE AGKL  AR+++  GCE+    EDVWLEAARL+  + AKVILA AV  LP+SVKIWM A  LE E   KK
Sbjct:  207 INARDQAMGGVATPVDGTK--TDFVQFGQARDKVLGLKLDQASDSVSGQTTIDPKGYLTDLSSVQVKSDAEISDIKKARTLLRSVTTTNPKHSPGWIAAARLEEVAGKLALAREIMAKGCEECSKSEDVWLEAARLNTTDNAKVILANAVRSLPQSVKIWMRAASLENEVKGKK 378          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A7R9XIK8_9CRUS (Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9XIK8_9CRUS)

HSP 1 Score: 187 bits (476), Expect = 4.350e-51
Identity = 121/213 (56.81%), Postives = 148/213 (69.48%), Query Frame = 0
Query:    8 FAGIATPLNAATPVA-------DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 213
            F G  TP+ + TP         DL ++G+A+ T++ ++LN  +DSVSGQTV DPKGYLTDL+SM      DI D+K+AR LL+S   TNP H PAWI +AR+EE  GK+ TAR LI  GCE     ED+WLEAARL  P+TAK  +A+AV  LP  V++W+ A DLE E  AKK     XXXXXXXXXXXXXXXXXXX PEDARILL+ +VEC
Sbjct:  223 FPGAGTPVGSVTPGMLTPTGDLDLRKIGQARNTLMDIKLNQVSDSVSGQTVVDPKGYLTDLQSMIPTYGGDIGDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKIQTARNLIMKGCELCPKSEDIWLEAARLQPPDTAKAAIAQAVRHLPDCVRLWIKAADLETELKAKKRVFRKXXXXXXXXXXXXXXXXXXXDPEDARILLSRSVEC 435          
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Match: A0A016VLF0_9BILA (Pre-mRNA-processing factor 6 n=8 Tax=Strongylida TaxID=6308 RepID=A0A016VLF0_9BILA)

HSP 1 Score: 187 bits (476), Expect = 4.730e-51
Identity = 121/214 (56.54%), Postives = 147/214 (68.69%), Query Frame = 0
Query:    5 EQQFAGIATPLNAATPVA---DLTQMGKAKKTILSMQLNSKADSVSGQTVADPKGYLTDLKSM--QGGGDVDISDVKRARELLQSALRTNPAHGPAWICAARIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAVSKLPKSVKIWMHAVDLEKENSAKKAXXXXXXXXXXXXXXXXXXXXXXXAPEDARILLAXAVEC 213
            +    G  T +N+        DL ++G+A+  I+ ++LN  +DSV+GQTV DPKGYLTDL+SM  Q GGD  I+DVK+AR LL+S   TNP H PAWI +AR+EE  GKL  AR LI  GCEK    ED+WLEA RLH PETAK I+A AV  +P SV+IWM A D+E +  AKK     XXXXXXXXXXXXXXXXX   P+DAR+LL  AVEC
Sbjct:  254 QSSLGGWKTGINSGISTGHDLDLIKIGQARNKIMDIKLNQVSDSVTGQTVVDPKGYLTDLQSMIPQYGGD--INDVKKARMLLKSVRETNPKHPPAWIASARLEEVVGKLQVARHLIMEGCEKNKKSEDIWLEAVRLHPPETAKAIVANAVRAMPHSVRIWMKAADIETDMKAKKKVFRKXXXXXXXXXXXXXXXXXLEEPDDARVLLTRAVEC 465          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97703.22500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G9TFD8_TELCI5.040e-5460.62Uncharacterized protein (Fragment) n=1 Tax=Telador... [more]
A0A2R7X8Q1_ONCFA3.030e-5358.33Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=On... [more]
A0A507F249_9FUNG3.150e-5252.87PRP1_N domain-containing protein n=2 Tax=Spizellom... [more]
Q1PQ57_DROMI4.220e-5256.80Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Dr... [more]
A0A0V1JUI6_TRIPS4.370e-5257.14Pre-mRNA-processing factor 6 (Fragment) n=2 Tax=Tr... [more]
D8RJT6_SELML9.560e-5252.94PRP1_N domain-containing protein n=3 Tax=Selaginel... [more]
A0A3P7LME1_STRVU2.040e-5161.66Pre-mRNA-processing factor 6 n=1 Tax=Strongylus vu... [more]
A0A507BY91_9FUNG2.200e-5153.45PRP1_N domain-containing protein n=1 Tax=Synchytri... [more]
A0A7R9XIK8_9CRUS4.350e-5156.81Pre-mRNA-processing factor 6 (Fragment) n=1 Tax=Ar... [more]
A0A016VLF0_9BILA4.730e-5156.54Pre-mRNA-processing factor 6 n=8 Tax=Strongylida T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 73..105
e-value: 0.037
score: 23.2
coord: 198..230
e-value: 0.25
score: 20.4
coord: 137..169
e-value: 0.011
score: 24.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 176..234
e-value: 3.5E-5
score: 25.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 70..175
e-value: 2.0E-13
score: 52.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 72..200
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 20..234
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 20..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97703contigM-pyrifera_M_contig97703:3..704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97703.22500.1mRNA_M-pyrifera_M_contig97703.22500.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97703 3..704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97703.22500.1 ID=prot_M-pyrifera_M_contig97703.22500.1|Name=mRNA_M-pyrifera_M_contig97703.22500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp
VDVREQQFAGIATPLNAATPVADLTQMGKAKKTILSMQLNSKADSVSGQT
VADPKGYLTDLKSMQGGGDVDISDVKRARELLQSALRTNPAHGPAWICAA
RIEECAGKLGTARKLIKSGCEKAGDHEDVWLEAARLHNPETAKVILAKAV
SKLPKSVKIWMHAVDLEKENSAKKAILRRALMLIPNSEELWKSAVELEAP
EDARILLARAVECIPDRVDLWLALARLETYDKAK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR027108Prp6/Prp1/STA1