mRNA_M-pyrifera_M_contig973.22405.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 1.680e-128 Identity = 198/295 (67.12%), Postives = 240/295 (81.36%), Query Frame = 1 Query: 1 VVFPLLMFVYVNRIVWSRLCTERSPVLFTPHPNARRGCCLFNACRDICGAWRTGSSMLSWADKGQWVSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICTKAGELLKGKTKKSKTLIRGSWDETMWIFFALVRENFIGCVKSTWKGPSYNPTANAQRVLRRRSTLLHRESRGGK 885 +VFP+LMF+YV+RIVWSR+ + SP+ + P+PNA +GC LF AC C AW +GSSM WADKGQW SKN+E VDLDSRKFRIGFEPLFVDYTQ+GTLYVTFLLFEW++FGLIAG VTNGTIQT +C IYV+D +IL+CL+PFSNSIIQC TTMTVLADA+TLGLM YA+ LEP+D D+D+L+L+Y GALL+Q TL I+FFV+PLYLDAFIT++GT+C K +L KG T K K I+GS ET IF ALVRENF+GCVKSTW+GP+YNP + RRRS+LL E + G+ Sbjct: 722 IVFPVLMFIYVSRIVWSRVRPDNSPLRYEPNPNAGKGCFLFKACGGFCKAWTSGSSMFEWADKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWLSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTVLADAITLGLMFYATFLEPDDDDDADRLELVYAGALLVQ-TLAILFFVIPLYLDAFITIVGTLCKKCSQLAKGTTSKFKAPIKGSSSETASIFCALVRENFVGCVKSTWRGPTYNPVQTE--LQRRRSSLLLPEFQEGQ 1013
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE) HSP 1 Score: 343 bits (881), Expect = 6.220e-105 Identity = 176/297 (59.26%), Postives = 214/297 (72.05%), Query Frame = 1 Query: 1 VVFPLLMFVYVNRIVWSRLCTERSPVLFTPHPNARRGCCLFNACRDICGAWRTGSSMLSWADKGQWVSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQ---------------------------------QTLTIIFFVVPLYLDAFITVIGTICTKAGELLKGKT-------KKSKTLIRGSWDETMWIFFALVRENF 771 +VFP+LMF+YV+RIVWSR+ + SP+ + P+PNA +GC LF AC C AW +GSSM WA+KGQW SKN+E VDLDSRKFRIGFEPLFVDYTQ+GTLYVTFLLFEW++FGLIAG VTNGTIQT +C IYV+D +IL+CL+PFSNSIIQC TTMTVLAD +TLGLM YA+ LEP+D D+D+L+L+Y GAL +Q QTL I+FFV+PLYLDAFIT+IG +C K +L KG T +K++ I+GS ET IFFALVRENF Sbjct: 1045 IVFPVLMFIYVSRIVWSRVRPDNSPLRYEPNPNAGKGCFLFKACGGFCKAWTSGSSMFEWAEKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWMSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTVLADTITLGLMFYATFLEPDDDDDADRLELVYAGALSVQAWFRVVCDFLDASPPARPPVLLVAGAVSLPTSAQTLAILFFVIPLYLDAFITIIGALCKKCSQLAKGTTSKFKARWRKNRAPIKGSSSETASIFFALVRENF 1341
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI) HSP 1 Score: 272 bits (695), Expect = 2.640e-79 Identity = 143/279 (51.25%), Postives = 189/279 (67.74%), Query Frame = 1 Query: 4 VFPLLMFVYVNRIVWSRLCTERSPVLFTPH---PNARRGCCLFNACRDICGAWRTGSSMLSWADKGQWVSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICTKAGELLKGKT--KKSKTLIRGSWDETMWIFFALVRENFIGCVKSTWKGPSYNPTAN 825 +FP+ + YV RIVWSR+ + PV FT R+ C + CR WR G S+ WADKG WVS DE VDL+SRKFRIGFEPLFVD+T+ G +Y+ FLLF+W A G+IAGLVTNGT+QT+ + +IY++D+ +L L+PFSNS++Q V T+ V ADALTLG+MV+ASVL+P+ D KLD IY G +LIQ TL I +P+Y D FI + I KA +L +G+ ++ K+ I+GSW E+ IF LVRENFIGCVK + GP P ++ Sbjct: 1177 IFPIFLMFYVGRIVWSRVKPQEGPVTFTKGLAPEEGRKRCWCVSLCRGFRDGWRNGHSIFEWADKGAWVSLKDEKVDLESRKFRIGFEPLFVDFTKEGAVYIIFLLFKWFALGIIAGLVTNGTVQTASLAVIYLVDIALLCKLRPFSNSVVQWVETVLVTADALTLGMMVWASVLDPDMDADKRKLDGIYAGCMLIQ-TLGIFLLTIPIYADTFIVIFFQIRHKASKLWRGERTPREQKSDIKGSWGESCGIFCVLVRENFIGCVKESVHGPRRKPRSS 1454
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: A0A6H5JTC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC8_9PHAE) HSP 1 Score: 256 bits (655), Expect = 1.590e-78 Identity = 136/279 (48.75%), Postives = 180/279 (64.52%), Query Frame = 1 Query: 28 YVNRIVWSRLCTERSPVLFTP-----------HPNARRGCCLFNACRDICGAWRTGSSMLSWADKGQWVSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICTKAGELLKGKT--KKSKTLIRGSWDETMWIFFALVRENFIGCVKSTWKGPSYNPTAN 825 YV RIVWSR+ + PV F R+ C C+ WR G S+ WADKG WVS DE VDLDSRKFRIGFEPLFVD+T+ G +Y+ FL+F+W A +IAGLVTNGT+QT+ + +IY++D+ +L L+PFSNS++Q V T+ V ADALTL LMV+AS L+P++ D KLD IY G +L+Q TL II +P+Y D F+ + I KA +L +G+ + K+ I+GSW E IF LVRENFIGCVK + +GP P ++ Sbjct: 3 YVGRIVWSRVKPQEGPVTFDKGLAPAGGDGXXXXXGRKRCWCVLLCKGFRDGWRNGHSVFEWADKGAWVSLKDEKVDLDSRKFRIGFEPLFVDFTKEGAVYIIFLIFKWFALAVIAGLVTNGTVQTASLAVIYLVDVALLCMLRPFSNSVVQWVETLLVTADALTLALMVWASALDPDEDGDKRKLDNIYAGCMLVQ-TLGIILLTIPIYADTFVVLFSQIRQKASKLWRGERTPRAEKSDIKGSWGEACGIFCVLVRENFIGCVKESVQGPRRKPRSS 280
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.960e-28 Identity = 88/282 (31.21%), Postives = 144/282 (51.06%), Query Frame = 1 Query: 1 VVFPLLMFVYVNRIVWSRLCTERSPVLFTPHPNARRGC---CLFNACRDICGAWRTGSSMLSWADKGQW--VSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICT-------KAGEL-LKGKTKKSKTLIRGSWDETMWI--FFALVRENFIGCVKSTWKG 801 V++PLLMF V R ++ R+ + + T + G C +W S+ SWADKGQW V + + + FRIGFEP+FVDYT+RGT ++ L EW + L+ ++ N +Q L C + +IL+CL+PF+NS+I + V DA++ GL+ A++ S +D A+ + Q +++ V+P+YLDA V+G I K G+ LKG++ +++ IR ++ W + A++R N C + T +G Sbjct: 1617 VLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDV-----NSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIR-TFTRRQWCGTWCAMLRHNVFACARDTREG 1892
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.000e-27 Identity = 89/286 (31.12%), Postives = 142/286 (49.65%), Query Frame = 1 Query: 1 VVFPLLMFVYVNRIVWSRLCTERSPVLFTPH--------PNARRGCCLFNACRDICGAWRTGSSMLSWADKGQW--VSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTI-------CTKAGELLKGKTKKSKTLIRGSWDETMWI--FFALVRENFIGCVKSTWKG 801 V++PLLMF V R ++ R+ + + T PN R G +W S+ SWADKGQW V + + + FRIGFEP+FVDYT+RGT ++ L EW + L+ ++ N +Q L C + +IL+CL+PF+NS+I + V DA+ GL+ A++ S +D A+ + Q +++ V+P+YLDA V+G I K G+ L G++ +++ IR ++ W + A++R N C + T G Sbjct: 1658 VLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGG-----FLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDV-----NSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIR-TFTRRQWCGTWCAMLRHNVFACARDTRDG 1932
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 120 bits (300), Expect = 1.460e-26 Identity = 89/281 (31.67%), Postives = 141/281 (50.18%), Query Frame = 1 Query: 1 VVFPLLMFVYVNRIVWSRLCTERSPVLFTPHPNARRGCCLFNA---CRDICGAWRTGSSMLSWADKGQW--VSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICT-------KAGELLKGKTKKSKTLIRGSWDETMWI--FFALVRENFIGCVKSTWKG 801 V++PLLMFV V R + R+ + T + G A +W S+ SWADKGQW V D V + FRIGFEP+FVDYT+RGT ++ L EW AF + ++ N +Q L C ++ + IL+ L+PF+NS+I + DA+++G+ AS L E + + L+ ++++ Q L++ V+P+YLDA V+G I K G L + ++++ IR S+ W + ++R N C + T +G Sbjct: 1436 VLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFA-ASALWWEGTNRAAHLN----TSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIR-SYTRRQWCGTWCTMLRHNVFACARDTSEG 1710
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 112 bits (280), Expect = 6.230e-24 Identity = 71/222 (31.98%), Postives = 116/222 (52.25%), Query Frame = 1 Query: 163 SSMLSWADKGQW--VSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICTKAGELL---KGKTKKSKTLIRGS----WDETMWIFFALVRENFIGCVKSTWKG 801 SS+ +WADKG W V DE D+ FRIGFEPL+ D+TQ G+ + + L EW IA LV N +Q L C ++ M I+L+ +PF+NS++ + + +L DA+ +G++ ++ + +D++D++ +++ Q L I VVPLY+D + V G I + G + + + I W T +F +V N CV+ T +G Sbjct: 415 SSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAA-ADRIDIV----VMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAEREFINRRTLRLWGRT---WFNMVGSNVFACVRDTREG 628
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.110e-23 Identity = 82/292 (28.08%), Postives = 141/292 (48.29%), Query Frame = 1 Query: 1 VVFPLLMFVYVNRIVWSRLCTERSPVLFTPHP---------NARRGCCLFNAC--RDICGAWRTGSSMLSWADKGQW--VSKNDEAVDLDSRKFRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTI-------CTKAGELLKGKTKKSKTL-----IRGSWDETMWIFFALVRENFIGCVKSTWKG 801 V +P+LMFV V R + R+ + ++FTP +A G +A + W S+ +WA+KG W ++E + + FRIGFEPLFVD+T+ G +V F L EW A G I L+ +Q SL C ++ + ++L+ +PF+NS+I + V DA+ + L+ S E + + K+D +++ Q + ++P+Y+D + +IG I T + ++ + +K + L IR SW T + ++ +N C T +G Sbjct: 1077 VFYPILMFVAVLRTFFVRV-RPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLA-VSASRWEGTAAAGKVD----SVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRT---WCTMLGKNIFACASDTREG 1359
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.590e-22 Identity = 71/222 (31.98%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 166 SMLSWADKGQWVSKNDEAVDLDSRK---FRIGFEPLFVDYTQRGTLYVTFLLFEWIAFGLIAGLVTNGTIQTSLICLIYVMDLIILICLQPFSNSIIQCVTTMTVLADALTLGLMVYASVLEPEDSVDSDKLDLIYTGALLIQQTLTIIFFVVPLYLDAFITVIGTICTKAG-------ELLKGKTKKSKTLIRGSWDETMWIFFALVRENFIGCVKSTWKG 801 S+ SWADKGQW + A D RK FRIGFEPLF D+TQ G+ ++ + L E IA LV N +Q L C ++ + ++L+ +PF+NS++ V M +L DA+ +G++ A+ + + ++D A+++ Q L I V+PLY+D +++ G I + G E + + + +K L W +F +V N C++ T +G Sbjct: 461 SLFSWADKGQWETVQT-ANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTF-NGTATAARMD----TAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERENEADRAEREVTKRLTLRLWGRA---WFRMVFSNMFACLRDTREG 673 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig973.22405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig973.22405.1 >prot_M-pyrifera_M_contig973.22405.1 ID=prot_M-pyrifera_M_contig973.22405.1|Name=mRNA_M-pyrifera_M_contig973.22405.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=294bp MFVYVNRIVWSRLCTERSPVLFTPHPNARRGCCLFNACRDICGAWRTGSSback to top mRNA from alignment at M-pyrifera_M_contig973:25728..29643- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig973.22405.1 ID=mRNA_M-pyrifera_M_contig973.22405.1|Name=mRNA_M-pyrifera_M_contig973.22405.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3916bp|location=Sequence derived from alignment at M-pyrifera_M_contig973:25728..29643- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig973:25728..29643- >mRNA_M-pyrifera_M_contig973.22405.1 ID=mRNA_M-pyrifera_M_contig973.22405.1|Name=mRNA_M-pyrifera_M_contig973.22405.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1764bp|location=Sequence derived from alignment at M-pyrifera_M_contig973:25728..29643- (Macrocystis pyrifera P11B4 male)back to top |