mRNA_M-pyrifera_M_contig97140.22378.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: A0A2D6LIT7_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D6LIT7_9ARCH) HSP 1 Score: 65.5 bits (158), Expect = 2.270e-10 Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 25 VLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFWSRVLATVAGRSVGADMRCAMQLAWRRQSALALLDRELSVTVARLQLDGPW 384 ++GT H++ S+ + ++ PD+VA+ELDN RAH L + + V+G + L+L + F + L V G G++M+ A++ A + S +AL+DR + VT+ RL W Sbjct: 8 MIGTSHIARESMDAVATHIKTKKPDIVALELDNRRAHALMHNAKS-KLSLKLIKVVGVKGFLFLVIASFLQKKLGKVVGVDPGSEMKTALKAAMKENSKIALIDRNIEVTMRRLSQTLSW 126
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: A0A2D6R970_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A2D6R970_9ARCH) HSP 1 Score: 60.5 bits (145), Expect = 1.840e-8 Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 25 VLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAH-FLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFWSRVLATVAGRSVGADMRCAMQLAWRRQSALALLDRELSVTVARLQLDGPW 384 +LGT H+S SV I +E+ D++AVELD GRAH L + + A + +G + +++ QF + L + G + G DM+ AMQLA +++ +AL+D+ + +T+ + W Sbjct: 6 LLGTSHISQESVKEITTKIESGRYDIIAVELDKGRAHALLSEQQNKIGLSA--IFKIGLKGYIFVKIGQFVQQKLGKLVGVAPGCDMKIAMQLAAQKKLQIALIDQPIQITLKNFSKELTW 124
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: UPI000DF78794 (TraB/GumN family protein n=2 Tax=Saliphagus TaxID=2039236 RepID=UPI000DF78794) HSP 1 Score: 60.5 bits (145), Expect = 4.120e-8 Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 1 KADGGTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFW--SRVLATVAGR---SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 +A+ G V VLGT H+S ASV + +++ PDVVAVELD GR L+ P D AR ++ G +L +W S V + + R GADMR A++ A R + +AL+DR++ VT+ R Sbjct: 19 EAEQGEVTVLGTAHVSHASVEDVHETVDRERPDVVAVELDEGRYRQLQGGA-PEDIEARDLLS-GNTVFQFLA---YWMLSYVQSRLGERFDIEPGADMRAAIEAAGRTGAGVALVDRDIQVTMQR 139
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: A0A1N7EHQ5_9EURY (TraB family protein n=2 Tax=Natronorubrum TaxID=134813 RepID=A0A1N7EHQ5_9EURY) HSP 1 Score: 59.7 bits (143), Expect = 7.660e-8 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 7 DGGTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFWSRVLATVAGR-------SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 D G++ VLGT H+S ASV + +++ PDVVAVELD GR ++ P D A+ ++ G +L +W +L+ V R G+DMR A++ A R +S +AL+DR++ VT+ R Sbjct: 18 DQGSIHVLGTAHVSQASVDDVHETIDREDPDVVAVELDEGRYRQMQGGT-PEDIEAKDLLS-GNTVFQFLA---YW--MLSYVQSRLGEKFDIEPGSDMRAAIEAAERNESGVALVDRDIQVTIQR 136
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: L9WSM7_9EURY (TraB determinant protein n=2 Tax=Natronorubrum bangense TaxID=61858 RepID=L9WSM7_9EURY) HSP 1 Score: 59.7 bits (143), Expect = 7.660e-8 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 13 GTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFW--SRVLATVAGR---SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 G+V VLGT H+S ASV + +++ PDVVAVELD GR ++ P D A+ ++ G +L +W S V + + R GADMR A++ A R +S +AL+DR++ VT+ R Sbjct: 21 GSVHVLGTAHVSQASVDDVHETIDREDPDVVAVELDEGRYRQMQGGT-PDDIEAKDLLS-GNTVFQFLA---YWMLSYVQSRLGERFDIEPGADMRAAIEAAERNESGVALVDRDIQVTIQR 137
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: A0A0B5HTE5_ARCG3 (Pheromone shutdown-related protein TraB n=2 Tax=Archaea TaxID=2157 RepID=A0A0B5HTE5_ARCG3) HSP 1 Score: 58.5 bits (140), Expect = 8.630e-8 Identity = 36/121 (29.75%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 19 VVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGG------SQFWSRVLATVAGRSVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 + ++GT H++G S + + ++PD+VAVELD R + L+ +V RR L K LGG +F + + + G++M A++LA + ++ +AL+DR++S+T+ R Sbjct: 7 IALVGTSHVAGESTRRVNAAFGEISPDIVAVELDRNRLYALKNKV-------RRPKNLELIKAFGLGGFIFYVIGEFVQKKIGKIVNIEPGSEMLAALKLAEKSKADIALIDRDISITMKR 120
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: L0AKH9_NATGS (Conjugal transfer protein TraB n=2 Tax=Natronobacterium gregoryi TaxID=44930 RepID=L0AKH9_NATGS) HSP 1 Score: 59.3 bits (142), Expect = 1.040e-7 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 7 DGGTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFWSRVLATVAGR-------SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 D G+V VLGT H+S ASV + +++ PDVVAVELD GR ++ P D A+ ++ G +L +W +L+ V R GADM+ A+ A R S +AL+DR++ VT+ R Sbjct: 21 DSGSVDVLGTAHVSQASVDEVHETVDEKRPDVVAVELDEGRYRQMQGGT-PDDLEAKDLLS-GNTVFQFLA---YW--MLSYVQSRLGDQFDVEPGADMQAAIDAAERNGSGVALVDRDIQVTIQR 139
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: UPI0006778D17 (TraB/GumN family protein n=1 Tax=Halopiger djelfimassiliensis TaxID=1293047 RepID=UPI0006778D17) HSP 1 Score: 58.9 bits (141), Expect = 1.420e-7 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 1 KADGGTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFWSRVLATVAGR-------SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 + D G+V VLGT H+S ASV + +++ PDVVAVELD GR ++ P D A+ ++ G +L +W +L+ V R GADMR A++ A R S ++L+DR++ VT+ R Sbjct: 17 ETDHGSVHVLGTAHVSQASVDDVHETIDREEPDVVAVELDEGRYRQMQGGT-PDDIEAKDLLS-GNTVFQFLA---YW--MLSYVQSRLGEKFDIEPGADMRAAIEAAERNGSGVSLVDRDIQVTIQR 137
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: F8D7C7_HALXS (TraB determinant protein n=2 Tax=Halopiger TaxID=387342 RepID=F8D7C7_HALXS) HSP 1 Score: 58.9 bits (141), Expect = 1.420e-7 Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 1 KADGGTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFWSRVLATVAGR-------SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 K D G+V VLGT H+S ASV + +++ PDVVAVELD GR ++ P D A+ ++ G +L +W +L+ V R GADM+ + A R S +AL+DR++ VT+ R Sbjct: 18 KDDEGSVTVLGTAHVSQASVDDVHEAVDRERPDVVAVELDEGRYRQMQGGT-PDDLEAKDLLS-GNTVFQFLA---YW--MLSYVQSRLGDQFDIEPGADMKAGIDAAERNGSGVALVDRDIQVTIQR 138
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Match: A0A2Z2HNA2_9EURY (Conjugal transfer protein TraB n=1 Tax=Natrarchaeobaculum aegyptiacum TaxID=745377 RepID=A0A2Z2HNA2_9EURY) HSP 1 Score: 58.9 bits (141), Expect = 1.420e-7 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 13 GTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEVVPLDRHARRMVVLGPRKLLWLGGSQFW--SRVLATVAGR---SVGADMRCAMQLAWRRQSALALLDRELSVTVAR 363 G+V VLGT H+S ASV + +++ PDVVAVELD GR ++ P D A+ ++ G +L +W S V + + R GADMR A+ A R S +AL+DR++ VT+ R Sbjct: 21 GSVQVLGTAHVSQASVDEVHETVDREQPDVVAVELDEGRFRQMQGGT-PDDIEAKDLLS-GNTVFQFLA---YWMLSYVQSRLGDRFDIEPGADMRAAIDAAERNGSGVALVDRDIQVTIQR 137 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97140.22378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97140.22378.1 >prot_M-pyrifera_M_contig97140.22378.1 ID=prot_M-pyrifera_M_contig97140.22378.1|Name=mRNA_M-pyrifera_M_contig97140.22378.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp KADGGTVVVLGTQHMSGASVGLIGRSMEALAPDVVAVELDNGRAHFLEPEback to top mRNA from alignment at M-pyrifera_M_contig97140:157..540- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97140.22378.1 ID=mRNA_M-pyrifera_M_contig97140.22378.1|Name=mRNA_M-pyrifera_M_contig97140.22378.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig97140:157..540- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97140:157..540- >mRNA_M-pyrifera_M_contig97140.22378.1 ID=mRNA_M-pyrifera_M_contig97140.22378.1|Name=mRNA_M-pyrifera_M_contig97140.22378.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig97140:157..540- (Macrocystis pyrifera P11B4 male)back to top |