mRNA_M-pyrifera_M_contig91873.21270.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91873.21270.1
Unique NamemRNA_M-pyrifera_M_contig91873.21270.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1W2G6N9_9BACT (Cytochrome c-type biogenesis protein CcsB n=2 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G6N9_9BACT)

HSP 1 Score: 454 bits (1169), Expect = 2.780e-150
Identity = 230/257 (89.49%), Postives = 243/257 (94.55%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIM LLA+NFAGNIWRYKLYRKEK +VLTFHVAFI+ILIGAFVTRYASFEG+MHIREGDS+NKIVSQDRYLMV+VKKG+EVE FEKKLNLS+FKQPD  V MG  DEI IEPKAFVPQAEQQVI +E GSTVLKLVTTS +GRENL+LASGGALLINNYPVTFDRPV GAINIFSKG+ELYIQSPFEMNFMVMATQ+AG LPADSLMPLKTRALYRGENTQFVIPEV
Sbjct:   23 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMGLLALNFAGNIWRYKLYRKEKLAVLTFHVAFIVILIGAFVTRYASFEGLMHIREGDSSNKIVSQDRYLMVEVKKGDEVESFEKKLNLSVFKQPDLVVNMGANDEIEIEPKAFVPQAEQQVIETENGSTVLKLVTTSGEGRENLYLASGGALLINNYPVTFDRPVAGAINIFSKGDELYIQSPFEMNFMVMATQTAGMLPADSLMPLKTRALYRGENTQFVIPEV 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1M6LQ94_9BACT (Cytochrome c-type biogenesis protein CcsB n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6LQ94_9BACT)

HSP 1 Score: 337 bits (865), Expect = 1.830e-105
Identity = 164/257 (63.81%), Postives = 204/257 (79.38%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            A  MAY TFLENDFGTQAV ++IY+AWWFEVIM LL +NFAGNI+RYKL RKEKF +  FHVAFI+ LIGAFVTRY  FEG+M IREG +A++IVSQ+RYL ++V KG+  E +E++LNLS F QPDF ++ G+  E+ +E  AFVPQAEQ+VI S+TG TVL +VT    GRENL+L SGG++L+NNYPVTF+ PV GA+NI+    EL IQSP E++FM+MATQS G LPAD+L  LK RALY+GE   FV+PE+
Sbjct:   23 AIAMAYGTFLENDFGTQAVQTMIYKAWWFEVIMFLLVLNFAGNIFRYKLLRKEKFPIFLFHVAFIVTLIGAFVTRYYGFEGLMSIREGQAASQIVSQERYLQIEVTKGDYKETYEQQLNLSFFSQPDFDLSFGQNGEVTVEAAAFVPQAEQKVIESKTGGTVLTVVTAGTTGRENLYLQSGGSILVNNYPVTFNNPVPGAVNIYDMDGELKIQSPVELSFMIMATQSGGRLPADTLQDLKLRALYQGEGVAFVVPEI 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A553FG21_9BACT (Cytochrome C biogenesis protein n=1 Tax=Fulvivirga sp. M361 TaxID=2594266 RepID=A0A553FG21_9BACT)

HSP 1 Score: 243 bits (621), Expect = 1.400e-70
Identity = 122/255 (47.84%), Postives = 171/255 (67.06%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEV-DEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVI 762
            A  MAYATF+ENDFGT      IY AWWFE++MA+LA+NFAGNI+RY+L RK+K S+L FH+AFI++LIGAFVTRY+S+EG++ IREG S NKI+SQ+RY+ + V    +   FEK+ +L+   QPD  +  G+  D I I    FVP A Q ++ SE  + V++LV  + +GR + +L SGG++ +N + VTF+      INI    +   I SP + N++VMA Q +G L  D    L+TRALYR ++  FV+
Sbjct:   22 AVAMAYATFMENDFGTNVARQAIYEAWWFELLMAILALNFAGNIYRYRLLRKDKLSILLFHLAFIVVLIGAFVTRYSSYEGLVRIREGQSTNKIISQERYVKMQVHWDNQEWEFEKRTHLTRLNQPDIDLEAGKTNDPIRIRINRFVPDAIQGLVESEDENEVIELVAATGEGRSSFYLESGGSVFLNGHEVTFNNEKVNGINITGGNDRYLIHSPEDFNYLVMANQQSGRLTKDVTDTLRTRALYRSDHLSFVV 276          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A7X8SKM6_9BACT (Cytochrome c biogenesis protein CcsA n=1 Tax=Flammeovirga agarivorans TaxID=2726742 RepID=A0A7X8SKM6_9BACT)

HSP 1 Score: 230 bits (587), Expect = 8.100e-66
Identity = 117/258 (45.35%), Postives = 165/258 (63.95%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            A +MA ATF+ENDFGT A   ++Y A WFE++  +L +NF GNI +YKL+RKEK +V TFH AFIIIL GAFVTRY  +EG MHIREG S+NK+VS DRY    +    E + F KK   +   QP+F      + D I+I P+ F+P A Q V+  E    ++++VT + QGR+++FL  G ++ +N   VTFD PV GAINI  KG +  I +P  +++ +MA Q +G+  A+    L+ +ALY     +FVI ++
Sbjct:   22 AISMAVATFVENDFGTPAARELVYNATWFEILQVILGLNFIGNIKKYKLFRKEKAAVFTFHAAFIIILFGAFVTRYFGYEGNMHIREGQSSNKLVSLDRYFQAHIHGNGENKEFSKKSTFTQIHQPNFDWEEDIKGDNIIITPREFIPDAVQSVVEGEANDAIIEIVTATDQGRKSIFLERGKSMFLNGQEVTFDNPVPGAINIQEKGVDYTINAPAHLSYFIMAQQVSGSTDANKEDKLQQQALYTMGELKFVIKDI 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A7X9P1T2_9BACT (Cytochrome c biogenesis protein CcsA n=5 Tax=Flammeovirga TaxID=59739 RepID=A0A7X9P1T2_9BACT)

HSP 1 Score: 222 bits (565), Expect = 8.870e-63
Identity = 114/257 (44.36%), Postives = 162/257 (63.04%), Query Frame = 1
Query:    4 FTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAM-GEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            F MAYATF+ENDFGT A   ++Y A WFE++ ALL +NF GNI++YKL R EK  VLTFHVAFIIIL+GAFVTRY  +EG + IREG S+N+I+S +RY    +      E  ++K   +   QPDF        DEI+I+P +FVP A Q ++  E    V+++VT+S  GR ++FL  G ++ +    VTFD   +GAINI     +  + +P  M++ +MA+Q +G  PA +   L+ +ALY     +FVI ++
Sbjct:   23 FAMAYATFVENDFGTPAAREMVYNATWFEIVQALLGLNFIGNIFKYKLLRVEKLGVLTFHVAFIIILLGAFVTRYFGYEGNIRIREGASSNQIISLERYFQAHIHGNGMNEELKRKSIFTQIHQPDFEWEQTNNQDEIVIKPTSFVPDAVQSIVEGEVSDAVIEIVTSSGDGRNSVFLEKGKSMFLQGQEVTFDNYKEGAINIKETSNDYSVNAPERMSYFIMASQQSGATPAQTEEKLQQQALYTMGTLKFVIKDI 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A3Q9FS29_9BACT (Cytochrome C biogenesis protein n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FS29_9BACT)

HSP 1 Score: 221 bits (563), Expect = 1.610e-62
Identity = 112/257 (43.58%), Postives = 164/257 (63.81%), Query Frame = 1
Query:    4 FTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFS-VAMGEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            F MA ATF+ENDFGT A    +Y A WFE++ A+L INF GNI++YKL RKEK  VLTFH+AFIIIL GAFVTRYA +EG + IREG S+N+++S +RY    +      +   +K   +I KQPD S     + D+I I+PK ++P A Q ++  E    V+++VT S+ GR +++L  G +  ++   VTFD P +GAINI     +  I +P  + + +MA+QS+G    ++   L+ RALY+  + +FVI ++
Sbjct:   23 FAMANATFIENDFGTPAARGSVYDALWFEILQAILGINFIGNIFKYKLLRKEKLGVLTFHLAFIIILAGAFVTRYAGYEGNLRIREGSSSNELISLERYFQAHIHGKSLNKEISEKSKFTILKQPDVSWTEENKGDKITIQPKEYIPDAVQSIVEGEVSDAVIEIVTASETGRSSIYLEKGKSRFLSGIEVTFDNPKEGAINIKETANDYSIHAPNRLTYFIMASQSSGATEENTEDKLQQRALYQMGDLRFVIKDI 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1S1YSN9_9BACT (Uncharacterized protein n=1 Tax=Flammeovirga pacifica TaxID=915059 RepID=A0A1S1YSN9_9BACT)

HSP 1 Score: 219 bits (559), Expect = 5.990e-62
Identity = 113/258 (43.80%), Postives = 164/258 (63.57%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            A  MA ATF+END+GT A   ++Y A WFE++ A+L +NF GNI +YKL RKEK +VLTFH++FIIIL+GAFVTR   +EG MHIREG S+N++VS DRY    +      + F +K   +   QP+F+       D++ + PK FVP A Q VI  E    V+++VT +  GR+ +FLA G ++ +N   +TF+ P  GAINI  KG +  I+SP  + + +MA QS+G++     + L+ +ALY     +FVI ++
Sbjct:   22 AMAMAVATFVENDYGTPAAREMVYNALWFEILQAILGLNFIGNIKKYKLLRKEKAAVLTFHISFIIILLGAFVTRNFGYEGNMHIREGQSSNQLVSLDRYFQAHIHGANVNKEFNRKSTFTQIHQPNFNWEENINGDKVTVTPKMFVPDAVQTVIDGEADDAVIEVVTATDSGRKTVFLAKGKSMFVNGQEITFNNPTKGAINIREKGLDYTIESPQHIGYFIMADQSSGSVDDGIEVKLQQQALYTMGELRFVIKDI 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A511YGZ2_9FLAO (Cytochrome c biogenesis protein n=4 Tax=Chryseobacterium TaxID=59732 RepID=A0A511YGZ2_9FLAO)

HSP 1 Score: 218 bits (556), Expect = 1.650e-61
Identity = 107/257 (41.63%), Postives = 164/257 (63.81%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPE 768
            AF MAYATFLEND+GT    ++IY AWWFE+IM LL +NF GNI RY+L+++EK+ VL FH+AF++I IG  +TRY SFEG+MHIREG++ N+IV+   +L + +++  +V +++    L      D          ++ +  K +V + +  ++A   G+  L LV+T Q GR+N+F+  G    +N   VTF+R +DGA+   ++G +L+I++P + N+M MATQ+ GT   D   PL  R+LY     + V+PE
Sbjct:    9 AFAMAYATFLENDYGTPTAKALIYEAWWFELIMLLLILNFIGNIGRYRLWKREKWPVLVFHLAFVLIFIGGAITRYISFEGMMHIREGETTNEIVTDKNFLKIQIEEKGDVLNYQDIPYLMSPLHKDLEATYDFRGKQVKVVAKEYVQRKKDSLVADANGAEYLHLVSTGQTGRQNIFIKPGETKSVNGTLVTFNRAIDGAVEFKNEGGQLFIKTPVDANYMTMATQATGTTRKDEFQPLALRSLYSINELKLVVPE 265          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1B1G2Q4_9BACT (Cytochrome c biogenesis protein CcsA n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A1B1G2Q4_9BACT)

HSP 1 Score: 215 bits (548), Expect = 1.940e-60
Identity = 113/259 (43.63%), Postives = 162/259 (62.55%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEV--DEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771
            A  M  ATF+END+GT A   ++Y A WFE++  +L INF GNI +YKL+RKEK +V TFH+AFIIIL+GAF+TR   +EG MHIREG S+N+++S DRY    +      + F +K   +   QP+F     E+  D+I + PK FVP A Q VI       V+++VT S+ GR+++FLA G ++ +N   +TF+ P  GAINI  KG E  I++P  + F +MA QS G++       L+  ALY   + +FVI ++
Sbjct:   22 AVAMGVATFVENDYGTPAAREMVYNALWFEILQVILGINFIGNIKKYKLFRKEKAAVFTFHIAFIIILLGAFITRNFGYEGNMHIREGQSSNQLISLDRYFNAHIHSASANKEFNRKSTFTQLHQPNFEWK-EEINGDQIKVTPKMFVPDAVQTVIEGGADDAVIEVVTASESGRKSVFLAKGKSMFVNGQEITFNNPNKGAINIREKGVEYTIETPQPIGFFIMADQSTGSVDDGIESKLQKEALYTMGDFRFVIKDI 279          
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: UPI000F86795B (cytochrome c biogenesis protein CcsA n=1 Tax=Chryseobacterium aureum TaxID=2497456 RepID=UPI000F86795B)

HSP 1 Score: 214 bits (546), Expect = 4.120e-60
Identity = 104/257 (40.47%), Postives = 168/257 (65.37%), Query Frame = 1
Query:    1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPE 768
            AF+MAYATFLEND+GT    ++IY A WFE+IM LL +NF GNI RY+L+++EK+ VL FH+AF++I +G  +TRY SFEGIMHIREG+++N+IV+   +  + +++  +V +++    L      DF+        E+ +  K ++ + +  ++A  +G+  L LV+T + GR+N+++  G    IN   VTF+RP+DGA+   ++G +L++++P +  +M MATQ+ G+   D   PL  R+LY   + + VIPE
Sbjct:   22 AFSMAYATFLENDYGTPTAKALIYEAKWFELIMVLLILNFVGNIARYRLWKREKWPVLIFHLAFVLIFVGGAITRYISFEGIMHIREGETSNEIVTDKNFFKIQIEEKGDVLNYQDVPYLMSPLHKDFNATYDFHGKEVKVVAKEYIQRKKDSLVADASGAEYLHLVSTGKTGRQNIYIKPGETKSINGTLVTFNRPIDGAVEFKNEGGKLFVKTPVDATYMTMATQATGSTKKDEFQPLALRSLYTINDLKLVIPE 278          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W2G6N9_9BACT2.780e-15089.49Cytochrome c-type biogenesis protein CcsB n=2 Tax=... [more]
A0A1M6LQ94_9BACT1.830e-10563.81Cytochrome c-type biogenesis protein CcsB n=4 Tax=... [more]
A0A553FG21_9BACT1.400e-7047.84Cytochrome C biogenesis protein n=1 Tax=Fulvivirga... [more]
A0A7X8SKM6_9BACT8.100e-6645.35Cytochrome c biogenesis protein CcsA n=1 Tax=Flamm... [more]
A0A7X9P1T2_9BACT8.870e-6344.36Cytochrome c biogenesis protein CcsA n=5 Tax=Flamm... [more]
A0A3Q9FS29_9BACT1.610e-6243.58Cytochrome C biogenesis protein n=2 Tax=Flammeovir... [more]
A0A1S1YSN9_9BACT5.990e-6243.80Uncharacterized protein n=1 Tax=Flammeovirga pacif... [more]
A0A511YGZ2_9FLAO1.650e-6141.63Cytochrome c biogenesis protein n=4 Tax=Chryseobac... [more]
A0A1B1G2Q4_9BACT1.940e-6043.63Cytochrome c biogenesis protein CcsA n=2 Tax=Flamm... [more]
UPI000F86795B4.120e-6040.47cytochrome c biogenesis protein CcsA n=1 Tax=Chrys... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91873contigM-pyrifera_M_contig91873:2..772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score206.5
Seed ortholog evalue1.5e-50
Seed eggNOG ortholog491205.JARQ01000001_gene904
Preferred nameccmC
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017004,GO:0022607,GO:0031224,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0065003,GO:0071840
EggNOG free text desc.Cytochrome C biogenesis protein CcsB
EggNOG OGs1HXDN@117743,3ZP6U@59732,4NDY1@976,COG0755@1,COG0755@2,COG1333@1,COG1333@2
COG Functional cat.O
Best tax levelChryseobacterium
Best eggNOG OGNA|NA|NA
Exons1
Model size771
Cds size762
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816831.2684035-UTR-M-pyrifera_M_contig91873:1..101622816831.2684035-UTR-M-pyrifera_M_contig91873:1..10Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91873 2..10 +
1692278204.075569-UTR-M-pyrifera_M_contig91873:1..101692278204.075569-UTR-M-pyrifera_M_contig91873:1..10Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91873 2..10 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816831.2790442-CDS-M-pyrifera_M_contig91873:10..7721622816831.2790442-CDS-M-pyrifera_M_contig91873:10..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91873 11..772 +
1692278204.0892088-CDS-M-pyrifera_M_contig91873:10..7721692278204.0892088-CDS-M-pyrifera_M_contig91873:10..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91873 11..772 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91873.21270.1prot_M-pyrifera_M_contig91873.21270.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91873 11..772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91873.21270.1

>prot_M-pyrifera_M_contig91873.21270.1 ID=prot_M-pyrifera_M_contig91873.21270.1|Name=mRNA_M-pyrifera_M_contig91873.21270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
MAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKE
KFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMV
DVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEVDEILIEPKAFVPQAEQQV
IASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINI
FSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFV
IPEV
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mRNA from alignment at M-pyrifera_M_contig91873:2..772+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91873.21270.1 ID=mRNA_M-pyrifera_M_contig91873.21270.1|Name=mRNA_M-pyrifera_M_contig91873.21270.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig91873:2..772+ (Macrocystis pyrifera P11B4 male)
GCCTTCACTATGGCATATGCCACTTTTCTAGAAAACGACTTCGGAACGCA AGCCGTACTTTCGATTATATATAGGGCCTGGTGGTTTGAGGTGATTATGG CTTTGTTGGCCATAAACTTCGCCGGAAACATCTGGCGATACAAGCTTTAT AGAAAAGAGAAATTTTCCGTACTCACCTTTCATGTCGCCTTCATCATTAT ACTGATAGGAGCATTCGTTACCCGCTATGCCAGTTTTGAAGGAATCATGC ACATCCGAGAAGGAGATTCTGCCAACAAAATAGTTTCGCAGGATCGCTAT CTGATGGTCGATGTGAAAAAAGGAGAAGAGGTAGAACATTTTGAGAAGAA ATTAAACCTTTCCATTTTTAAACAACCAGACTTTTCTGTAGCTATGGGTG AGGTTGATGAAATTCTTATTGAGCCTAAGGCTTTTGTCCCCCAGGCTGAG CAGCAGGTGATAGCATCTGAAACCGGCTCTACGGTTCTGAAATTGGTCAC TACCTCACAACAAGGCAGAGAGAATCTGTTCTTGGCCTCAGGAGGCGCTT TGTTGATCAACAATTATCCTGTCACTTTTGATCGACCAGTAGATGGCGCA ATCAATATTTTTAGTAAAGGTGAGGAACTCTATATTCAGTCGCCATTCGA AATGAATTTCATGGTGATGGCCACCCAAAGTGCCGGGACGCTACCAGCCG ACTCCTTGATGCCTCTAAAAACCAGAGCACTCTATCGTGGTGAGAACACG CAGTTTGTAATCCCAGAGGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91873:2..772+

>mRNA_M-pyrifera_M_contig91873.21270.1 ID=mRNA_M-pyrifera_M_contig91873.21270.1|Name=mRNA_M-pyrifera_M_contig91873.21270.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig91873:2..772+ (Macrocystis pyrifera P11B4 male)
ATGGCATATGCCACTTTTCTAGAAAACGACTTCGGAACGCAAGCCGTACT
TTCGATTATATATAGGGCCTGGTGGTTTGAGGTGATTATGGCTTTGTTGG
CCATAAACTTCGCCGGAAACATCTGGCGATACAAGCTTTATAGAAAAGAG
AAATTTTCCGTACTCACCTTTCATGTCGCCTTCATCATTATACTGATAGG
AGCATTCGTTACCCGCTATGCCAGTTTTGAAGGAATCATGCACATCCGAG
AAGGAGATTCTGCCAACAAAATAGTTTCGCAGGATCGCTATCTGATGGTC
GATGTGAAAAAAGGAGAAGAGGTAGAACATTTTGAGAAGAAATTAAACCT
TTCCATTTTTAAACAACCAGACTTTTCTGTAGCTATGGGTGAGGTTGATG
AAATTCTTATTGAGCCTAAGGCTTTTGTCCCCCAGGCTGAGCAGCAGGTG
ATAGCATCTGAAACCGGCTCTACGGTTCTGAAATTGGTCACTACCTCACA
ACAAGGCAGAGAGAATCTGTTCTTGGCCTCAGGAGGCGCTTTGTTGATCA
ACAATTATCCTGTCACTTTTGATCGACCAGTAGATGGCGCAATCAATATT
TTTAGTAAAGGTGAGGAACTCTATATTCAGTCGCCATTCGAAATGAATTT
CATGGTGATGGCCACCCAAAGTGCCGGGACGCTACCAGCCGACTCCTTGA
TGCCTCTAAAAACCAGAGCACTCTATCGTGGTGAGAACACGCAGTTTGTA
ATCCCAGAGGTTATGGCATATGCCACTTTTCTAGAAAACGACTTCGGAAC
GCAAGCCGTACTTTCGATTATATATAGGGCCTGGTGGTTTGAGGTGATTA
TGGCTTTGTTGGCCATAAACTTCGCCGGAAACATCTGGCGATACAAGCTT
TATAGAAAAGAGAAATTTTCCGTACTCACCTTTCATGTCGCCTTCATCAT
TATACTGATAGGAGCATTCGTTACCCGCTATGCCAGTTTTGAAGGAATCA
TGCACATCCGAGAAGGAGATTCTGCCAACAAAATAGTTTCGCAGGATCGC
TATCTGATGGTCGATGTGAAAAAAGGAGAAGAGGTAGAACATTTTGAGAA
GAAATTAAACCTTTCCATTTTTAAACAACCAGACTTTTCTGTAGCTATGG
GTGAGGTTGATGAAATTCTTATTGAGCCTAAGGCTTTTGTCCCCCAGGCT
GAGCAGCAGGTGATAGCATCTGAAACCGGCTCTACGGTTCTGAAATTGGT
CACTACCTCACAACAAGGCAGAGAGAATCTGTTCTTGGCCTCAGGAGGCG
CTTTGTTGATCAACAATTATCCTGTCACTTTTGATCGACCAGTAGATGGC
GCAATCAATATTTTTAGTAAAGGTGAGGAACTCTATATTCAGTCGCCATT
CGAAATGAATTTCATGGTGATGGCCACCCAAAGTGCCGGGACGCTACCAG
CCGACTCCTTGATGCCTCTAAAAACCAGAGCACTCTATCGTGGTGAGAAC
ACGCAGTTTGTAATCCCAGAGGTT
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