mRNA_M-pyrifera_M_contig91873.21270.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1W2G6N9_9BACT (Cytochrome c-type biogenesis protein CcsB n=2 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G6N9_9BACT) HSP 1 Score: 454 bits (1169), Expect = 2.780e-150 Identity = 230/257 (89.49%), Postives = 243/257 (94.55%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIM LLA+NFAGNIWRYKLYRKEK +VLTFHVAFI+ILIGAFVTRYASFEG+MHIREGDS+NKIVSQDRYLMV+VKKG+EVE FEKKLNLS+FKQPD V MG DEI IEPKAFVPQAEQQVI +E GSTVLKLVTTS +GRENL+LASGGALLINNYPVTFDRPV GAINIFSKG+ELYIQSPFEMNFMVMATQ+AG LPADSLMPLKTRALYRGENTQFVIPEV Sbjct: 23 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMGLLALNFAGNIWRYKLYRKEKLAVLTFHVAFIVILIGAFVTRYASFEGLMHIREGDSSNKIVSQDRYLMVEVKKGDEVESFEKKLNLSVFKQPDLVVNMGANDEIEIEPKAFVPQAEQQVIETENGSTVLKLVTTSGEGRENLYLASGGALLINNYPVTFDRPVAGAINIFSKGDELYIQSPFEMNFMVMATQTAGMLPADSLMPLKTRALYRGENTQFVIPEV 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1M6LQ94_9BACT (Cytochrome c-type biogenesis protein CcsB n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6LQ94_9BACT) HSP 1 Score: 337 bits (865), Expect = 1.830e-105 Identity = 164/257 (63.81%), Postives = 204/257 (79.38%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 A MAY TFLENDFGTQAV ++IY+AWWFEVIM LL +NFAGNI+RYKL RKEKF + FHVAFI+ LIGAFVTRY FEG+M IREG +A++IVSQ+RYL ++V KG+ E +E++LNLS F QPDF ++ G+ E+ +E AFVPQAEQ+VI S+TG TVL +VT GRENL+L SGG++L+NNYPVTF+ PV GA+NI+ EL IQSP E++FM+MATQS G LPAD+L LK RALY+GE FV+PE+ Sbjct: 23 AIAMAYGTFLENDFGTQAVQTMIYKAWWFEVIMFLLVLNFAGNIFRYKLLRKEKFPIFLFHVAFIVTLIGAFVTRYYGFEGLMSIREGQAASQIVSQERYLQIEVTKGDYKETYEQQLNLSFFSQPDFDLSFGQNGEVTVEAAAFVPQAEQKVIESKTGGTVLTVVTAGTTGRENLYLQSGGSILVNNYPVTFNNPVPGAVNIYDMDGELKIQSPVELSFMIMATQSGGRLPADTLQDLKLRALYQGEGVAFVVPEI 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A553FG21_9BACT (Cytochrome C biogenesis protein n=1 Tax=Fulvivirga sp. M361 TaxID=2594266 RepID=A0A553FG21_9BACT) HSP 1 Score: 243 bits (621), Expect = 1.400e-70 Identity = 122/255 (47.84%), Postives = 171/255 (67.06%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEV-DEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVI 762 A MAYATF+ENDFGT IY AWWFE++MA+LA+NFAGNI+RY+L RK+K S+L FH+AFI++LIGAFVTRY+S+EG++ IREG S NKI+SQ+RY+ + V + FEK+ +L+ QPD + G+ D I I FVP A Q ++ SE + V++LV + +GR + +L SGG++ +N + VTF+ INI + I SP + N++VMA Q +G L D L+TRALYR ++ FV+ Sbjct: 22 AVAMAYATFMENDFGTNVARQAIYEAWWFELLMAILALNFAGNIYRYRLLRKDKLSILLFHLAFIVVLIGAFVTRYSSYEGLVRIREGQSTNKIISQERYVKMQVHWDNQEWEFEKRTHLTRLNQPDIDLEAGKTNDPIRIRINRFVPDAIQGLVESEDENEVIELVAATGEGRSSFYLESGGSVFLNGHEVTFNNEKVNGINITGGNDRYLIHSPEDFNYLVMANQQSGRLTKDVTDTLRTRALYRSDHLSFVV 276
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A7X8SKM6_9BACT (Cytochrome c biogenesis protein CcsA n=1 Tax=Flammeovirga agarivorans TaxID=2726742 RepID=A0A7X8SKM6_9BACT) HSP 1 Score: 230 bits (587), Expect = 8.100e-66 Identity = 117/258 (45.35%), Postives = 165/258 (63.95%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 A +MA ATF+ENDFGT A ++Y A WFE++ +L +NF GNI +YKL+RKEK +V TFH AFIIIL GAFVTRY +EG MHIREG S+NK+VS DRY + E + F KK + QP+F + D I+I P+ F+P A Q V+ E ++++VT + QGR+++FL G ++ +N VTFD PV GAINI KG + I +P +++ +MA Q +G+ A+ L+ +ALY +FVI ++ Sbjct: 22 AISMAVATFVENDFGTPAARELVYNATWFEILQVILGLNFIGNIKKYKLFRKEKAAVFTFHAAFIIILFGAFVTRYFGYEGNMHIREGQSSNKLVSLDRYFQAHIHGNGENKEFSKKSTFTQIHQPNFDWEEDIKGDNIIITPREFIPDAVQSVVEGEANDAIIEIVTATDQGRKSIFLERGKSMFLNGQEVTFDNPVPGAINIQEKGVDYTINAPAHLSYFIMAQQVSGSTDANKEDKLQQQALYTMGELKFVIKDI 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A7X9P1T2_9BACT (Cytochrome c biogenesis protein CcsA n=5 Tax=Flammeovirga TaxID=59739 RepID=A0A7X9P1T2_9BACT) HSP 1 Score: 222 bits (565), Expect = 8.870e-63 Identity = 114/257 (44.36%), Postives = 162/257 (63.04%), Query Frame = 1 Query: 4 FTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAM-GEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 F MAYATF+ENDFGT A ++Y A WFE++ ALL +NF GNI++YKL R EK VLTFHVAFIIIL+GAFVTRY +EG + IREG S+N+I+S +RY + E ++K + QPDF DEI+I+P +FVP A Q ++ E V+++VT+S GR ++FL G ++ + VTFD +GAINI + + +P M++ +MA+Q +G PA + L+ +ALY +FVI ++ Sbjct: 23 FAMAYATFVENDFGTPAAREMVYNATWFEIVQALLGLNFIGNIFKYKLLRVEKLGVLTFHVAFIIILLGAFVTRYFGYEGNIRIREGASSNQIISLERYFQAHIHGNGMNEELKRKSIFTQIHQPDFEWEQTNNQDEIVIKPTSFVPDAVQSIVEGEVSDAVIEIVTSSGDGRNSVFLEKGKSMFLQGQEVTFDNYKEGAINIKETSNDYSVNAPERMSYFIMASQQSGATPAQTEEKLQQQALYTMGTLKFVIKDI 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A3Q9FS29_9BACT (Cytochrome C biogenesis protein n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FS29_9BACT) HSP 1 Score: 221 bits (563), Expect = 1.610e-62 Identity = 112/257 (43.58%), Postives = 164/257 (63.81%), Query Frame = 1 Query: 4 FTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFS-VAMGEVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 F MA ATF+ENDFGT A +Y A WFE++ A+L INF GNI++YKL RKEK VLTFH+AFIIIL GAFVTRYA +EG + IREG S+N+++S +RY + + +K +I KQPD S + D+I I+PK ++P A Q ++ E V+++VT S+ GR +++L G + ++ VTFD P +GAINI + I +P + + +MA+QS+G ++ L+ RALY+ + +FVI ++ Sbjct: 23 FAMANATFIENDFGTPAARGSVYDALWFEILQAILGINFIGNIFKYKLLRKEKLGVLTFHLAFIIILAGAFVTRYAGYEGNLRIREGSSSNELISLERYFQAHIHGKSLNKEISEKSKFTILKQPDVSWTEENKGDKITIQPKEYIPDAVQSIVEGEVSDAVIEIVTASETGRSSIYLEKGKSRFLSGIEVTFDNPKEGAINIKETANDYSIHAPNRLTYFIMASQSSGATEENTEDKLQQRALYQMGDLRFVIKDI 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1S1YSN9_9BACT (Uncharacterized protein n=1 Tax=Flammeovirga pacifica TaxID=915059 RepID=A0A1S1YSN9_9BACT) HSP 1 Score: 219 bits (559), Expect = 5.990e-62 Identity = 113/258 (43.80%), Postives = 164/258 (63.57%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 A MA ATF+END+GT A ++Y A WFE++ A+L +NF GNI +YKL RKEK +VLTFH++FIIIL+GAFVTR +EG MHIREG S+N++VS DRY + + F +K + QP+F+ D++ + PK FVP A Q VI E V+++VT + GR+ +FLA G ++ +N +TF+ P GAINI KG + I+SP + + +MA QS+G++ + L+ +ALY +FVI ++ Sbjct: 22 AMAMAVATFVENDYGTPAAREMVYNALWFEILQAILGLNFIGNIKKYKLLRKEKAAVLTFHISFIIILLGAFVTRNFGYEGNMHIREGQSSNQLVSLDRYFQAHIHGANVNKEFNRKSTFTQIHQPNFNWEENINGDKVTVTPKMFVPDAVQTVIDGEADDAVIEVVTATDSGRKTVFLAKGKSMFVNGQEITFNNPTKGAINIREKGLDYTIESPQHIGYFIMADQSSGSVDDGIEVKLQQQALYTMGELRFVIKDI 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A511YGZ2_9FLAO (Cytochrome c biogenesis protein n=4 Tax=Chryseobacterium TaxID=59732 RepID=A0A511YGZ2_9FLAO) HSP 1 Score: 218 bits (556), Expect = 1.650e-61 Identity = 107/257 (41.63%), Postives = 164/257 (63.81%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPE 768 AF MAYATFLEND+GT ++IY AWWFE+IM LL +NF GNI RY+L+++EK+ VL FH+AF++I IG +TRY SFEG+MHIREG++ N+IV+ +L + +++ +V +++ L D ++ + K +V + + ++A G+ L LV+T Q GR+N+F+ G +N VTF+R +DGA+ ++G +L+I++P + N+M MATQ+ GT D PL R+LY + V+PE Sbjct: 9 AFAMAYATFLENDYGTPTAKALIYEAWWFELIMLLLILNFIGNIGRYRLWKREKWPVLVFHLAFVLIFIGGAITRYISFEGMMHIREGETTNEIVTDKNFLKIQIEEKGDVLNYQDIPYLMSPLHKDLEATYDFRGKQVKVVAKEYVQRKKDSLVADANGAEYLHLVSTGQTGRQNIFIKPGETKSVNGTLVTFNRAIDGAVEFKNEGGQLFIKTPVDANYMTMATQATGTTRKDEFQPLALRSLYSINELKLVVPE 265
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: A0A1B1G2Q4_9BACT (Cytochrome c biogenesis protein CcsA n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A1B1G2Q4_9BACT) HSP 1 Score: 215 bits (548), Expect = 1.940e-60 Identity = 113/259 (43.63%), Postives = 162/259 (62.55%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMGEV--DEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPEV 771 A M ATF+END+GT A ++Y A WFE++ +L INF GNI +YKL+RKEK +V TFH+AFIIIL+GAF+TR +EG MHIREG S+N+++S DRY + + F +K + QP+F E+ D+I + PK FVP A Q VI V+++VT S+ GR+++FLA G ++ +N +TF+ P GAINI KG E I++P + F +MA QS G++ L+ ALY + +FVI ++ Sbjct: 22 AVAMGVATFVENDYGTPAAREMVYNALWFEILQVILGINFIGNIKKYKLFRKEKAAVFTFHIAFIIILLGAFITRNFGYEGNMHIREGQSSNQLISLDRYFNAHIHSASANKEFNRKSTFTQLHQPNFEWK-EEINGDQIKVTPKMFVPDAVQTVIEGGADDAVIEVVTASESGRKSVFLAKGKSMFVNGQEITFNNPNKGAINIREKGVEYTIETPQPIGFFIMADQSTGSVDDGIESKLQKEALYTMGDFRFVIKDI 279
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Match: UPI000F86795B (cytochrome c biogenesis protein CcsA n=1 Tax=Chryseobacterium aureum TaxID=2497456 RepID=UPI000F86795B) HSP 1 Score: 214 bits (546), Expect = 4.120e-60 Identity = 104/257 (40.47%), Postives = 168/257 (65.37%), Query Frame = 1 Query: 1 AFTMAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEKFSVLTFHVAFIIILIGAFVTRYASFEGIMHIREGDSANKIVSQDRYLMVDVKKGEEVEHFEKKLNLSIFKQPDFSVAMG-EVDEILIEPKAFVPQAEQQVIASETGSTVLKLVTTSQQGRENLFLASGGALLINNYPVTFDRPVDGAINIFSKGEELYIQSPFEMNFMVMATQSAGTLPADSLMPLKTRALYRGENTQFVIPE 768 AF+MAYATFLEND+GT ++IY A WFE+IM LL +NF GNI RY+L+++EK+ VL FH+AF++I +G +TRY SFEGIMHIREG+++N+IV+ + + +++ +V +++ L DF+ E+ + K ++ + + ++A +G+ L LV+T + GR+N+++ G IN VTF+RP+DGA+ ++G +L++++P + +M MATQ+ G+ D PL R+LY + + VIPE Sbjct: 22 AFSMAYATFLENDYGTPTAKALIYEAKWFELIMVLLILNFVGNIARYRLWKREKWPVLIFHLAFVLIFVGGAITRYISFEGIMHIREGETSNEIVTDKNFFKIQIEEKGDVLNYQDVPYLMSPLHKDFNATYDFHGKEVKVVAKEYIQRKKDSLVADASGAEYLHLVSTGKTGRQNIYIKPGETKSINGTLVTFNRPIDGAVEFKNEGGKLFVKTPVDATYMTMATQATGSTKKDEFQPLALRSLYTINDLKLVIPE 278 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91873.21270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91873.21270.1 >prot_M-pyrifera_M_contig91873.21270.1 ID=prot_M-pyrifera_M_contig91873.21270.1|Name=mRNA_M-pyrifera_M_contig91873.21270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp MAYATFLENDFGTQAVLSIIYRAWWFEVIMALLAINFAGNIWRYKLYRKEback to top mRNA from alignment at M-pyrifera_M_contig91873:2..772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91873.21270.1 ID=mRNA_M-pyrifera_M_contig91873.21270.1|Name=mRNA_M-pyrifera_M_contig91873.21270.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig91873:2..772+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91873:2..772+ >mRNA_M-pyrifera_M_contig91873.21270.1 ID=mRNA_M-pyrifera_M_contig91873.21270.1|Name=mRNA_M-pyrifera_M_contig91873.21270.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig91873:2..772+ (Macrocystis pyrifera P11B4 male)back to top |