mRNA_M-pyrifera_M_contig91863.21264.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: A0A1Y3NQB0_PIRSE (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NQB0_PIRSE) HSP 1 Score: 56.6 bits (135), Expect = 9.510e-8 Identity = 26/73 (35.62%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVG-------------EKHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISD 183 Y+Y + + E G++++G EK+V T+D+D KIR++ P+TY IK+FCLGH+ ++S++ I + Sbjct: 109 YRYSVDDSEENGKLMLGHVSMLTDILLSKDEKYVITSDRDEKIRITNYPKTYIIKTFCLGHKEYISKMHFIPN 181
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: A0A1S8W9L8_9FUNG (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W9L8_9FUNG) HSP 1 Score: 55.8 bits (133), Expect = 1.790e-7 Identity = 26/73 (35.62%), Postives = 41/73 (56.16%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVGE-------------KHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISD 183 Y+Y++ + E ++++G KH+ TAD+D KIRVS P + I FCLGHE F+SR+ + + Sbjct: 133 YRYIVDDPEKQAELILGHVSMLTDVLWSHDGKHILTADRDEKIRVSKYPHAFDIVEFCLGHEQFISRMILLPE 205
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: UPI001B7F6236 (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 isoform X1 n=2 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7F6236) HSP 1 Score: 55.8 bits (133), Expect = 1.800e-7 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVGE-------------KHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLA 171 Y + I+E GQ+ +G +HV TAD+D KIRVS+L Q Y I++FCLGH FVS L+ Sbjct: 116 YSFSISEPHSPGQLQLGHLSMLLAVAVSPDSRHVITADRDEKIRVSLLEQPYVIEAFCLGHREFVSELS 184
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: A0A1S8W9L4_9FUNG (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W9L4_9FUNG) HSP 1 Score: 55.8 bits (133), Expect = 1.830e-7 Identity = 26/73 (35.62%), Postives = 41/73 (56.16%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVGE-------------KHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISD 183 Y+Y++ + E ++++G KH+ TAD+D KIRVS P + I FCLGHE F+SR+ + + Sbjct: 133 YRYIVDDPEKQAELILGHVSMLTDVLWSHDGKHILTADRDEKIRVSKYPHAFDIVEFCLGHEQFISRMILLPE 205
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: A0A1V4JCF4_PATFA (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 n=5 Tax=Neognathae TaxID=8825 RepID=A0A1V4JCF4_PATFA) HSP 1 Score: 55.5 bits (132), Expect = 2.480e-7 Identity = 28/73 (38.36%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVG-------------EKHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISD 183 Y Y I E + G++ +G ++++ TAD+D KIRVS+ YCI S+CLGHE FVS++ I + Sbjct: 140 YSYSITEPQADGKLELGHLSLLLDVALSPDDQYILTADRDEKIRVSLAKAPYCIVSYCLGHEEFVSKILVIPN 212
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: UPI00112B4DF6 (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform X1 n=6 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112B4DF6) HSP 1 Score: 54.3 bits (129), Expect = 6.330e-7 Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVG-------------EKHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISD 183 Y + IAE + GQ+ +G +K++ TAD+D KIRVS+L + I SFCLGH FVSR+ + + Sbjct: 125 YSFAIAEPQKKGQLELGHLSMLLDVAVSPDDKYIITADRDEKIRVSLLKAPHNIASFCLGHREFVSRILVLPN 197
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: F2UMC8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMC8_SALR5) HSP 1 Score: 53.9 bits (128), Expect = 8.660e-7 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1 Query: 70 TADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISD 183 TAD+DGKIR+S LP +CI +FCLGH FVS + +D Sbjct: 174 TADRDGKIRISRLPDAFCIDAFCLGHTEFVSAITGTAD 211
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: A0A067QVS8_ZOONE (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wuho n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QVS8_ZOONE) HSP 1 Score: 53.1 bits (126), Expect = 1.620e-6 Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 1 Query: 55 EKHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLAAISDTRLV 195 EK++ T D+D KIRVS P TY IKS+CLGH+ F++ L+ + + V Sbjct: 156 EKYIITCDRDEKIRVSQYPNTYNIKSYCLGHKEFITGLSLLPADKTV 202
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: A0A7S0R3V3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R3V3_9CHLO) HSP 1 Score: 51.2 bits (121), Expect = 1.970e-6 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 1 Query: 58 KHVATADKDGKIRVSMLPQ-----TYCIKSFCLGHEGFVSRLA 171 KHVAT DKDG++RVS+LPQ Y I++FCLGH+ F + A Sbjct: 57 KHVATCDKDGRVRVSVLPQEPLKGAYEIQAFCLGHQNFATSAA 99
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Match: UPI0009A2BBC9 (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2BBC9) HSP 1 Score: 52.8 bits (125), Expect = 2.210e-6 Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 4 YKYVIAERELTGQVLVG-------------EKHVATADKDGKIRVSMLPQTYCIKSFCLGHEGFVSRLA 171 Y + I + + GQ+ +G +++V TAD+D KIRVS+L Q Y I++FCLGH FVS+L+ Sbjct: 125 YSFSINKPDSPGQLQLGHLSMLLAVAVSPDDRYVITADRDEKIRVSLLEQPYIIEAFCLGHREFVSQLS 193 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91863.21264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91863.21264.1 >prot_M-pyrifera_M_contig91863.21264.1 ID=prot_M-pyrifera_M_contig91863.21264.1|Name=mRNA_M-pyrifera_M_contig91863.21264.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp CYKYVIAERELTGQVLVGEKHVATADKDGKIRVSMLPQTYCIKSFCLGHEback to top mRNA from alignment at M-pyrifera_M_contig91863:575..772+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91863.21264.1 ID=mRNA_M-pyrifera_M_contig91863.21264.1|Name=mRNA_M-pyrifera_M_contig91863.21264.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig91863:575..772+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91863:575..772+ >mRNA_M-pyrifera_M_contig91863.21264.1 ID=mRNA_M-pyrifera_M_contig91863.21264.1|Name=mRNA_M-pyrifera_M_contig91863.21264.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig91863:575..772+ (Macrocystis pyrifera P11B4 male)back to top |