mRNA_M-pyrifera_M_contig91771.21253.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: A0A7S4I7R0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I7R0_9EUKA) HSP 1 Score: 115 bits (288), Expect = 8.910e-31 Identity = 52/94 (55.32%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 55 VVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSIALQEE 336 +VKLNVGG R+ TT++TLA G NAL++++++V R+T+T+D G++FIDRCGTTF GVL+YLR+G ++P G TR Q++ ELD+FSI + EE Sbjct: 16 IVKLNVGGTRFMTTYSTLAAHGKNALTAMLDNVNSGRVTSTVDESGYLFIDRCGTTFYGVLDYLRSGIIIPPNGITRQQLMIELDYFSINIVEE 109
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: A0A7S4HGT9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HGT9_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 1.190e-15 Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 55 VVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSIALQEEIM 342 +VKLNVGG TT TL RG+N S+L++ M +T D G FIDR GT F +L++LRTG L G +RA +L+E +++SIAL E M Sbjct: 11 IVKLNVGGTTIHTTSQTLLQRGTNFFSALLD----GSMDSTKDETGAYFIDRNGTLFEPILDFLRTGKLFVISGISRAAVLEEAEYYSIALPESEM 102
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: A0A7S4IT82_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IT82_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 1.990e-15 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 55 VVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSIALQEEIMP 345 ++KLNVGGV+Y T +TL +G N + L+++ N + D EG++FIDR G FR VLNYLRTG L AQ+ ELDF+ + +E P Sbjct: 37 LIKLNVGGVKYITARSTLFSKGENFFTVLLDNDQGNGVPCVRDEEGYVFIDRDGELFRHVLNYLRTGKLYKPDNLPTAQLELELDFYQVKRNQEKSP 133
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: M0QSN1_ACACA (K+ channel tetramerisation subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=M0QSN1_ACACA) HSP 1 Score: 79.0 bits (193), Expect = 9.140e-15 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 55 VVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATI-DNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSIAL 327 +VKLN+GGV+YETT TL RG N ++L H+F AT+ D EG+ FIDR G F+ +L+YLRTG+L PG ++ + +E F+ I L Sbjct: 308 IVKLNIGGVKYETTVGTLVSRGDNFFTTLFSHMF-----ATLKDEEGYYFIDRDGEYFKPLLSYLRTGELRVPPGMSKMCVEREAHFYLIDL 394
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: M0QSU0_ACACA (K+ channel tetramerisation subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=M0QSU0_ACACA) HSP 1 Score: 76.3 bits (186), Expect = 2.350e-14 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 52 DVVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSIALQEEIMP 345 +VV+LNVGGV Y TT ATL RG N + L++ +R AT D +G +F+DR G F VL++LRTG LV PG R+ + E +F+ I L + P Sbjct: 52 EVVRLNVGGVVYVTTAATLRSRGENFFTGLLDR---SREWATHDGDGALFVDRNGHHFGPVLDFLRTGRLVVPPGMDRSAVEAECNFYLIELPADARP 146
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: A0A6B2LII9_9EUKA (BTB domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LII9_9EUKA) HSP 1 Score: 75.1 bits (183), Expect = 3.310e-14 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 52 DVVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSI 321 ++VK NVGG R+ T+++T+ +G N LS LV++ M+ D +G++FIDR G F+ +L+YLRT +L T Q+L +LD++ I Sbjct: 13 ELVKFNVGGKRFLTSYSTVTAKGENFLSRLVDYHKRGDMSVGTDEKGYLFIDRNGEVFQVILDYLRTNELFVNGNVTVRQVLCDLDYYQI 102
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: A0A6B2LBT1_9EUKA (BTB domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LBT1_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 1.550e-12 Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 64 LNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDLVPYPGTTRAQILQELDFFSIAL 327 +N+GG ++ TT TL GSN S L E E + D EGFIFIDR GT FR +LNYLRTG LV P ++ I+ E +F+SI L Sbjct: 1 MNIGGEKFYTTKETLCHLGSNFFSCLFE---EKSVPVIKDEEGFIFIDRDGTLFRPLLNYLRTGTLVVNPENLQS-IIVEAEFYSIDL 84
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: UPI0009E36DA2 (BTB/POZ domain-containing protein KCTD6-like isoform X2 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E36DA2) HSP 1 Score: 66.2 bits (160), Expect = 3.560e-11 Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 28 EATKNYKKDVVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDL-VPYPGTTRAQILQELDFFSI 321 EA KN+ +VKLNVGG + T+ ATL + +S++ +F R +G FIDR GT FR +LNYLRTG L VP R ++L E F+ I Sbjct: 48 EAEKNHFPKMVKLNVGGHLFSTSLATL----TKDPASMLHAMFSGRFDTKPGEDGSYFIDRDGTHFRYILNYLRTGQLIVPEDKVLRKELLAEAQFYQI 142
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: UPI0009E19366 (BTB/POZ domain-containing protein KCTD21-like isoform X1 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E19366) HSP 1 Score: 67.4 bits (163), Expect = 4.300e-11 Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 28 EATKNYKKDVVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDL-VPYPGTTRAQILQELDFFSI 321 EA KN+ +VKLNVGG + T+ ATL + +S++ +F R +G FIDR GT FR +LNYLRTG L VP R ++L E +F+ I Sbjct: 48 EAEKNHFPKMVKLNVGGHLFSTSLATL----TKDPASMLHAMFSGRFDTKPSGDGSYFIDRDGTHFRYILNYLRTGQLLVPKDEIIRVELLAEAEFYQI 142
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Match: M0QSP9_ACACA (K+ channel tetramerisation subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=M0QSP9_ACACA) HSP 1 Score: 67.8 bits (164), Expect = 7.330e-11 Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 55 VVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTATIDNEGFIFIDRCGTTFRGVLNYLRTGDL-VPYPGTTRAQILQELDFFSI 321 +VKLNVGG +Y TT ATL A SL+E +F N D EG FIDR GT F +LN+LR G + +P GT +L+E F+ + Sbjct: 60 IVKLNVGGQKYTTTVATLR----RARGSLLEAMFSNTSIPAQDEEGAYFIDRDGTFFSLILNFLRDGSVELPTDGTVLRAVLREAQFYQL 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91771.21253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91771.21253.1 >prot_M-pyrifera_M_contig91771.21253.1 ID=prot_M-pyrifera_M_contig91771.21253.1|Name=mRNA_M-pyrifera_M_contig91771.21253.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp MEATKNYKKDVVKLNVGGVRYETTWATLACRGSNALSSLVEHVFENRMTAback to top mRNA from alignment at M-pyrifera_M_contig91771:357..701- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91771.21253.1 ID=mRNA_M-pyrifera_M_contig91771.21253.1|Name=mRNA_M-pyrifera_M_contig91771.21253.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=345bp|location=Sequence derived from alignment at M-pyrifera_M_contig91771:357..701- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91771:357..701- >mRNA_M-pyrifera_M_contig91771.21253.1 ID=mRNA_M-pyrifera_M_contig91771.21253.1|Name=mRNA_M-pyrifera_M_contig91771.21253.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig91771:357..701- (Macrocystis pyrifera P11B4 male)back to top |