mRNA_M-pyrifera_M_contig9154.21211.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A7S3Q642_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q642_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.490e-27 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYN 208 +++DCP NC+ NG+CS+EFP+SRC+C+ GY GN CQH+EC+NNCSYP+G CD STG C C SPYN Sbjct: 1005 SIRDCPDNCNDNGYCSLEFPMSRCICNDGYKGNACQHIECMNNCSYPNGECDYSTGACECNALRSPYN 1072
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: H3GSZ4_PHYRM (EGF-like domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSZ4_PHYRM) HSP 1 Score: 95.5 bits (236), Expect = 3.010e-21 Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNT 214 +++DC NCS +G+CSVEFP SRCMC G+YG C CLNNCSYP+G C G C C M Y PYNNT Sbjct: 538 SIRDCGYNCSGHGYCSVEFPNSRCMCDEGWYGKYCDAQMCLNNCSYPNGEC--MNGSCYCAMVYEPYNNT 605
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: D8LEQ8_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ8_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 5.570e-21 Identity = 43/71 (60.56%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNTR 217 +++DC NCSFNGWCSVEFPVSR YPHGTCDSSTG CACEMTYSPYNNTR Sbjct: 844 SIKDCQYNCSFNGWCSVEFPVSRXXXXXXXXXXXXXXXXXXXXXXYPHGTCDSSTGVCACEMTYSPYNNTR 914
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: W2QAY2_PHYPN (EGF-like domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QAY2_PHYPN) HSP 1 Score: 93.6 bits (231), Expect = 1.400e-20 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNT 214 ++++C NCS G+CSVEFP SRCMC G+YG C+ CLNNCSYP+G C + G C C M Y PYNNT Sbjct: 531 SIRNCGYNCSGRGYCSVEFPNSRCMCDEGWYGKYCETQMCLNNCSYPNGECVN--GSCYCAMVYEPYNNT 598
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A6A3M1I0_9STRA (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M1I0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.410e-20 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNT 214 ++++C NCS +G+CSVEFP SRCMC G+YG C CLNNCSYP+G C + G C C M Y PYNNT Sbjct: 680 SIRNCGYNCSGHGYCSVEFPNSRCMCDDGWYGKYCDAQMCLNNCSYPNGECVN--GSCYCSMVYEPYNNT 747
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A5A8EC49_CAFRO (EGF-like domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EC49_CAFRO) HSP 1 Score: 91.3 bits (225), Expect = 9.170e-20 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNT 214 +V+DCP C+ NG+CSVEFPVSRC+C PG+ G C CLNNC+YP+G C GRC C +PYN + Sbjct: 699 SVRDCPDGCNGNGYCSVEFPVSRCVCDPGWTGRACDTRLCLNNCTYPNGVCVG--GRCNCTFLQNPYNRS 766
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A5D6XWT5_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWT5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.360e-19 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNT 214 +++DC NCS +G+CSVEFP SRC+C G++G C CLNNCSYP+G C G C C M Y PYN + Sbjct: 650 SIRDCGANCSGHGYCSVEFPNSRCLCDEGWFGKYCDAQMCLNNCSYPNGVC--LNGSCYCAMVYEPYNRS 717
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A482UY94_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UY94_9ARCH) HSP 1 Score: 85.1 bits (209), Expect = 1.170e-17 Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNTR 217 +V+DCP NCSFNGWCSVEFPVSRC YP+G C++++G CAC M YSPY NTR Sbjct: 323 SVKDCPKNCSFNGWCSVEFPVSRCXXXXXXXXXXXXXXXXXXXXXYPNGVCNTTSGMCACNMMYSPYLNTR 393
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A835Z8A8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.830e-17 Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNTR 217 +++DCP NCSF+GWCSVEFPVSRC YPHG C+++TG C C Y+PYNNTR Sbjct: 805 SIRDCPQNCSFHGWCSVEFPVSRCXXXXXXXXXXXXXXXXXXXXXYPHGVCNNATGECDCRDVYNPYNNTR 875
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Match: A0A7S2RQC4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQC4_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.550e-17 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 5 AVQDCPGNCSFNGWCSVEFPVSRCMCHPGYYGNECQHLECLNNCSYPHGTCDSSTGRCACEMTYSPYNNTR 217 +++DCP NC++NGWCSVE+PVSR S+P+G CD +TG C C+ YSPYNNTR Sbjct: 24 SIKDCPDNCNYNGWCSVEYPVSRXXXXXXXXXXXXXXXXXXXXXSFPNGVCDYATGECKCQRLYSPYNNTR 94 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9154.21211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9154.21211.1 >prot_M-pyrifera_M_contig9154.21211.1 ID=prot_M-pyrifera_M_contig9154.21211.1|Name=mRNA_M-pyrifera_M_contig9154.21211.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp LRRAGLPRKLLLQRLVLCGVPRISVHVSPGVLRERMPAPGVPQQLLLPSRback to top mRNA from alignment at M-pyrifera_M_contig9154:11012..11239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9154.21211.1 ID=mRNA_M-pyrifera_M_contig9154.21211.1|Name=mRNA_M-pyrifera_M_contig9154.21211.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=228bp|location=Sequence derived from alignment at M-pyrifera_M_contig9154:11012..11239+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9154:11012..11239+ >mRNA_M-pyrifera_M_contig9154.21211.1 ID=mRNA_M-pyrifera_M_contig9154.21211.1|Name=mRNA_M-pyrifera_M_contig9154.21211.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig9154:11012..11239+ (Macrocystis pyrifera P11B4 male)back to top |