mRNA_M-pyrifera_M_contig9029.20935.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI) HSP 1 Score: 384 bits (987), Expect = 9.900e-121 Identity = 193/231 (83.55%), Postives = 209/231 (90.48%), Query Frame = 1 Query: 1 LQVDDDYFPIVESAMDDSREALQRFCQQDPTA-DPRMPPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEP-GESRGFAASGWNRPHTLPRLDDKFD 687 +QV+DDYFPIVESAMDDSREALQR CQQ + DPRMPP NLNDSVNQLDL+AYADEL+RQGEGKRA QLDSIVEEIRYPYRDRRMPYS PGEDELFEWLTGETD TLREGVLVPVR+M+HNDAGVRVRLEGGPGLFGFVP DYVTDDVLP DPITGQ+ +LK VVKENQLMEAAI+KVDKGR+ELKLSLRKSDT +PD WD P G +R F ASGWNRP +LPRLD+KF+ Sbjct: 1308 VQVEDDYFPIVESAMDDSREALQRLCQQGESGVDPRMPPNNLNDSVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKGRFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN 1538
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.740e-78 Identity = 135/173 (78.03%), Postives = 143/173 (82.66%), Query Frame = 1 Query: 121 LNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYR--------------DRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPD 597 L+ VNQLDL+AYADEL+RQGEGKRA QLDSIVEEIRYPYR DRRMPYS PGEDELFEWLTGETD TLREGVLVPVR+M+HNDAGVRVRLEGGPGLFGFVP DYVTDDVLP DPITGQ VVKENQLMEAAI+KVDK R+ELKLSLRKSDT +PD Sbjct: 349 LDVQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNDEMINQMVVHVDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQG-----VVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPD 516
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.080e-45 Identity = 94/218 (43.12%), Postives = 129/218 (59.17%), Query Frame = 1 Query: 37 SAMDDSREALQRFCQQDPTADPRMPPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEG-GPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGESRGFAASGWNRPHTLPRLDDKFD 687 S MDDSRE L+ +DP P P L D + +LDL +A ELERQG GKR +QL+++ +EIR+PYR+RR P+ +D++FEW+TGE D TLR G++V V H GVR +EG L GF+P D + DD LP D +L + N + A I + K R+E++LSLR+SDTQ+NP W + W RP +LP +D +FD Sbjct: 482 SIMDDSREVLRATLDRDPDWRPENPESELKDKLEELDLVEFAGELERQGLGKRRMQLEAVKDEIRFPYRERRRPFQRASDDDVFEWITGEDDATLRPGMVVTCSVSGHTRGGVRATVEGLSRALLGFIPMDKLQDDPLPPD------ADLALMFPRNSIRSAVIADIRKPRFEVQLSLRRSDTQQNPAAW----------GTQWRRPMSLPPIDREFD 683
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: K0RC99_THAOC (S1 motif domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RC99_THAOC) HSP 1 Score: 94.4 bits (233), Expect = 1.570e-18 Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 97 DPRM-PPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGESRGFAASGWNRPHTLPRLDDKFD 687 DP++ PP + D + +LD+ A+AD +E+ G GK QL E+R PY D R P P LF+ LTGETD +L G V +V+K+ND G +++LEG + GF+P + DD + + +V+ ++ A I +V + LSL++ D ++ +S W RP +L LD FD Sbjct: 688 DPKLLPPESWRDKIEELDIEAFADMIEQNGSGKWLTQLTMTKWELRMPYEDPRKPMEPPQGARLFKLLTGETDASLCPGKHVTGKVIKNNDFGSQIKLEGD--VPGFIPLRNLADDHVE---------SADDIVQVGTVVNAIITQVKMDHMCVDLSLKREDFKKK--------------SSEWERPASLAPLDPYFD 860
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A7S2P3B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P3B4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.210e-18 Identity = 64/194 (32.99%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 106 MPPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGESRGFAASGWNRPHTLPRLDDKFD 687 +P D V +LDL +A+ +++ G GK L+ + E R P++D R P P + LF LTGETD TL G V +VMK+ D G +V+LEG + GF+P + DD + + + +V+ ++ A I +V + LSL+K D ++ +S W RP +LP LDD FD Sbjct: 688 VPTERWRDKVEELDLETFAEMIQQSGLGKWLSHLNMVKWEYRLPFQDPRKPMVPPTGETLFRLLTGETDATLCPGKEVTGKVMKNGDFGSQVKLEGD--VPGFIPLRNLADDHVE---------SAEDIVQVGTVVTALITQVKMEHMCVDLSLKKEDFKKK--------------SSEWERPQSLPPLDDHFD 856
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A433PG63_9FUNG (Transcription elongation factor Spt6 n=2 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PG63_9FUNG) HSP 1 Score: 90.1 bits (222), Expect = 4.680e-17 Identity = 50/157 (31.85%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 118 NLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQR-GNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQ 585 N + +N+L L YA++L R+ + + L+ I +E++YPY+D+R P+ P + F+ ++GET +TLREG++VPV + K RL+ G D V+ ID ++ +R N+ + + + + ++K+D+ RY ++LS R+SDT+ Sbjct: 1089 NYPEKLNELMLEDYAEQLYRETKMHKRQTLEQIKQELQYPYKDQRRPFQKPNIMQTFQMISGETPQTLREGLIVPVMITKTKGKWANGRLDSG------------LDAVIGIDHVSDERISNVDEKLHVSDIKNCKVIKIDRERYLVELSSRESDTR 1233
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A3B4XSJ0_SERLL (Transcription elongation factor spt6 n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XSJ0_SERLL) HSP 1 Score: 87.4 bits (215), Expect = 3.970e-16 Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 133 VNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAG--------VRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGES 621 + LDL A+A+ELERQG G + + L I E+ Y+D R+PY VP +E+F LT ET ET G V H D+G VR RL+ G + GF+P +++D V+ + ++ VK + IMK+D ++ + L+ R SD + W P +S Sbjct: 1061 LKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNLLTKETPETFYIGNTHCTEVWNHFDSGSCPGQAIGVRSRLDNG--VQGFIPTKFLSDKVVK---------HPEERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDS 1220
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A8K1CHS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHS1_PYTOL) HSP 1 Score: 87.0 bits (214), Expect = 5.360e-16 Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 121 LNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAG--VRVRLEGG--PGLFGFVPADYVTDD 441 + D++++LDL AYA LE+Q +G + L L+ I E+RYPY D+R PY +P E+ELF L+GE +T +EG++VP ++ H G VRVRL+ G L + DY+TDD Sbjct: 1076 IQDALSELDLPAYASRLEQQKKGPKLLTLEYIKRELRYPYFDKRHPYQMPREEELFVLLSGENKDTFQEGIIVPCTLL-HMAGGEFVRVRLQNGMRATLKKDLLPDYLTDD 1185
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: Q55A48_DICDI (Transcription elongation factor spt6 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55A48_DICDI) HSP 1 Score: 86.3 bits (212), Expect = 9.970e-16 Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 133 VNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDE 609 +++LDL +AD +E + L I +E+ P+ D R PY P D +FEWLTGET+++LR G LV V ++ D V+ RL+ G L G +P D ++D+ G+ +L + V N +M VDK ++ + LS + SD NP W+E Sbjct: 1099 LDRLDLDGFADIIESHEDRPARKLLYFIKKELTNPFADIRHPYEEPSADTIFEWLTGETNQSLRRGTLVTVTTIRTFDNSVKCRLDNG--LEGSIPTDCISDN--------GETKSLGRGVTIN----CRVMGVDKYQFTVSLSCKPSDL--NPSFWEE 1241
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A3N4M1T4_9PEZI (Transcription elongation factor Spt6 (Fragment) n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4M1T4_9PEZI) HSP 1 Score: 85.5 bits (210), Expect = 1.790e-15 Identity = 57/182 (31.32%), Postives = 95/182 (52.20%), Query Frame = 1 Query: 118 NLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQ----------RNPDMWDEPGESRGFA 633 N + VN L L YA+ELE+ K+ L++I E+++PY + R + + +F LTGET+ETL EG++VPV V + D + VRL+ G + G VP D + + + + V Q ++A ++ +++ + +LSLR+SD + R+P+ WD+ E R A Sbjct: 1039 NQENKVNDLILEEYAEELEKTFNQKKRATLETIRAELQHPYEELRKAFKTLSFERIFTMLTGETNETLFEGMVVPVNVRRVADRYISVRLDCG--IDGNVPQDMIDNSGVSVHA----------VYAVGQTVQAKVLSLERKSFFAELSLRESDIRNGLRRFDRQDRDPEEWDDVREERDRA 1208 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9029.20935.1 >prot_M-pyrifera_M_contig9029.20935.1 ID=prot_M-pyrifera_M_contig9029.20935.1|Name=mRNA_M-pyrifera_M_contig9029.20935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp LQVDDDYFPIVESAMDDSREALQRFCQQDPTADPRMPPMNLNDSVNQLDLback to top mRNA from alignment at M-pyrifera_M_contig9029:57..5767+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9029.20935.1 ID=mRNA_M-pyrifera_M_contig9029.20935.1|Name=mRNA_M-pyrifera_M_contig9029.20935.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5711bp|location=Sequence derived from alignment at M-pyrifera_M_contig9029:57..5767+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9029:57..5767+ >mRNA_M-pyrifera_M_contig9029.20935.1 ID=mRNA_M-pyrifera_M_contig9029.20935.1|Name=mRNA_M-pyrifera_M_contig9029.20935.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig9029:57..5767+ (Macrocystis pyrifera P11B4 male)back to top |