mRNA_M-pyrifera_M_contig89113.20660.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89113.20660.1 vs. uniprot
Match: A0A3C0Q9Q1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0Q9Q1_9GAMM) HSP 1 Score: 259 bits (661), Expect = 2.310e-75 Identity = 137/264 (51.89%), Postives = 173/264 (65.53%), Query Frame = 1 Query: 4 VEFDFRKLFYSDYLAFNDIKGSAELTRTALVLNAFGARFHDSPITLDGGLTFTAGETAPYTAKLRGKIADFDLNQFFTELTPNEESRIEGLFSVDIAIDGTSPNAAQFRNRLLLDLKMNSRDGLFRPLPAGGTLMAGASDALGIVGEGLSYVPTGGFGAGAVSRLVNYIAVIDYDVIDIHITRDTSLDLVIKRFNMLSPNIRMSAKGAIAHEYGKDIIDSPLDVVAHLNMTGKGAAILYSIDLLEDEQDKYGYWKGPEFRISGS 795 V FD +LFY+DYL IKG E T L+L+ F A FHDSPIT DG + F GE PY KL I FD+ +FF EL P R EGLF++ + G SPN Q+RN+L D+++ SRDG+FRP L+AG+S G GE +SYVPTG FG GAVSRLV YI I+YD IDIH+ RD S D+ I+++ + SP I M AKG I ++ G DI+ SPL + L+M +GAAILYS++LL+DEQD YGYWKGPE G+ Sbjct: 1039 VTFDLERLFYTDYLEITGIKGRTEDTAGKLLLSDFEAHFHDSPITADGVINFVPGEV-PYDLKLEAAIEQFDVARFFRELAPEHTPRAEGLFNIKLDAFGQSPNMPQYRNKLFFDMRLQSRDGVFRPFNPDSALVAGSSGFAGGFGEVVSYVPTGLFGLGAVSRLVYYIKEIEYDKIDIHMVRDESRDVQIRKYVIQSPEILMLAKGGIEYQEGIDILHSPLSLKVQLDMRDRGAAILYSLNLLQDEQDPYGYWKGPEINAWGT 1301
BLAST of mRNA_M-pyrifera_M_contig89113.20660.1 vs. uniprot
Match: A0A2G4HIF5_9BACT (Uncharacterized protein n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2G4HIF5_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 1.790e-19 Identity = 80/285 (28.07%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 1 EVEFDFRKLFYSDYLAFNDIKGSAELTRTALVLNAFGARFHD-SPITLDGGLTFTAGETAPYTAKLRGKIADFDLNQFFTELTPNEESRIEGLFSVDIAIDGTSPNAAQFRNRLLLDLKMNSRDGLFRPLPA------------GGTL-----MAGASDALGIVGEGLSYVPTGGFGAGAVSRLVNYIAVIDYDVIDIHITRDTSLDLVIKRFNMLSPNIRMSAKGAIAHEYGKDIIDSPLDVVAHLNMTGKGAAILYSIDLLEDEQ-DKYGYWKGP-EFRISGS 795 ++ +K+ Y+ DI G+ + A+ L A + S I L GGLTFT PY L + +FD L P + +EG F+V + G + N + R D + S+ G+FR L A TL +AGA + + S V AV+ L I+ I+YD +++ TRD +L+L +K F +++P +R++ G IA + G ++ PL + L G +L S+ LE E+ D+ GY++ R++GS Sbjct: 707 QLALSLKKVVYAQKFEVADIGGTIRIDAGAVKLVGVRAGLGEGSEIKLKGGLTFTPTAPEPYGVALDLDVTNFDPAPVLRALNPGQPPTVEGKFTVASKVTGNARNLGEIGQRAAGDFALTSKGGVFRALAADVSSKVATTTKTASTLATLGNLAGALTGRKDISDAASKVE-------AVASLSKMISAIEYDQLNVVFTRDAALNLTLKDFTLIAPELRLAGTGRIAAKVGLELAAQPLVMEFKLGARGTMGKLLKSLAALETEKPDELGYFRSNLPLRVTGS 984
BLAST of mRNA_M-pyrifera_M_contig89113.20660.1 vs. uniprot
Match: A0A3E1EFK0_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EFK0_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 5.640e-17 Identity = 70/251 (27.89%), Postives = 115/251 (45.82%), Query Frame = 1 Query: 19 RKLFYSDYLAFNDIKGSAELTRTALVLNAFGARFH-DSPITLDGGLTFTAGETAPYTAKLRGKIADFDLNQFFTELTPNEESRIEGLFSVDIAIDGTSPNAAQFRNRLLLDLKMNSRDGLFRPLPAGGTLMAGASDALGIVGEGLSYVPTGGF--GAGAVSRLVNYIAVIDYDVIDIHITRDTSLDLVIKRFNMLSPNIRMSAKGAIAHEYGKDIIDSPLDVVAHLNMTGKGAAILYSIDLLEDEQDKYGY 762 +K+ ++D +D+ G+ L T L L A F DS + L GGLTF+ G A Y + +FDL+ F L P +EG ++ ++G S + A+ DLK+ + GLFR + + + + L V T F ++ + +A I YD + + TRD SL+L ++ F ++SP +R+ G I + G ++ PL L G+ ++ LLE + D GY Sbjct: 703 KKVIWNDQWQVSDLSGAIGLEPTVLQLADLRAVFGPDSIVKLSGGLTFSPGGPATYGFTADLALDNFDLSAVFRALDPTRPPTVEGRVNLLSHLEGKSASLAELAAVTRGDLKVTGKSGLFRAFAVDLSDRIQKNQSRVVAIGSLLGVVTDDFVNKTKILADIAKSLAEIPYDQLSLTATRDESLNLRVRNFTLISPEVRIGGSGNIRYAAGVPLLAQPLQAQLSLGTRGRLGDLMKRAGLLEPQLDNLGY 953
BLAST of mRNA_M-pyrifera_M_contig89113.20660.1 vs. uniprot
Match: A0A3D2KNE9_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobia TaxID=74201 RepID=A0A3D2KNE9_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 1.220e-12 Identity = 66/274 (24.09%), Postives = 117/274 (42.70%), Query Frame = 1 Query: 13 DFRKLFYSDYLAFNDIKGSAELTRTALVLNAFGARFHDSPITLDGGLTFTAGETAPYTAKLRGKIADFDLN-----QFFTELTP---NEESRIEGLFSVDIAIDGTSPNAAQFRNRLLLDLKMNSRDGLFRPLPAGGTLMAGASDALGIVGE-----GLSYVPTGGFGAGAVSRLVNYIAVIDYDVIDIHITRDTSLDLVIKRFNMLSPNIRMSAKGAIAHEYGKDIIDSPLDVVAHLNMTGKGAAILYSIDLLEDEQDKYGYWKGPEFRISGS 795 D +L Y K ++ L L F ++P ++ F + PYT G++ D+ + F +P + I + S I ++ S NA + K+ ++ G PL + AG +G++ G + P GG G +V+Y I YD I + + RD DLV+K + P + + G + H+ ++D PL V A L+ G+GA + + +LE +++Y Y+ GP+F ++G+ Sbjct: 905 DIGRLIYKGMPVLTAFKAKLDVDADTLTLKPLQGTFLEAPFAVEASFGFKQSDL-PYT--FHGEMVWNDIRMDSVYKHFLASSPIFTGSVTCIANVSSSGIDLNDLSNNAHG-------NFKLTAKSGKITPLV---NMNAGQQIGIGLLSTAGSILGNVFKPLGGLG-----DVVSYFKEIPYDNIRLDLNRDPGSDLVLKNITLEGPELYLQGTGKVVHQPKVPLLDQPLHVDARLDAKGEGAKVFSGLGILESAKNRYDYYIGPKFTLTGT 1160
BLAST of mRNA_M-pyrifera_M_contig89113.20660.1 vs. uniprot
Match: A0A257QFR4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium 21-51-4 TaxID=1970609 RepID=A0A257QFR4_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 4.380e-10 Identity = 44/142 (30.99%), Postives = 66/142 (46.48%), Query Frame = 1 Query: 370 GLFRPLPAGGTLMAGASDALGIVGEGLSYVPTGGFGAGAVSRLVNYIAVIDYDVIDIHITRDTSLDLVIKRFNMLSPNIRMSAKGAIAHEYGKDIIDSPLDVVAHLNMTGKGAAILYSIDLLEDEQDKYGYWKGPEFRISGS 795 G F L AGG + +GI G ++R+ + IDY I R + L++V+ F + P +RM GA+ ++ G I + PL V ++ G A I LL E D GY+KGP+FRI+G+ Sbjct: 1 GTFYVLAAGGKAAQAGAAVVGIAGIVNKATGNKVGQIDTLNRVTQLLQKIDYTEFRIEAKRGSDLNIVLNPFLVQGPELRMFGTGAVTYQDGVAIANQPLLVTTFIDAKGSAAKTFSDIKLLSTEVDSAGYYKGPQFRITGT 142 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89113.20660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89113.20660.1 >prot_M-pyrifera_M_contig89113.20660.1 ID=prot_M-pyrifera_M_contig89113.20660.1|Name=mRNA_M-pyrifera_M_contig89113.20660.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp EVEFDFRKLFYSDYLAFNDIKGSAELTRTALVLNAFGARFHDSPITLDGGback to top mRNA from alignment at M-pyrifera_M_contig89113:15..809+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89113.20660.1 ID=mRNA_M-pyrifera_M_contig89113.20660.1|Name=mRNA_M-pyrifera_M_contig89113.20660.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig89113:15..809+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89113:15..809+ >mRNA_M-pyrifera_M_contig89113.20660.1 ID=mRNA_M-pyrifera_M_contig89113.20660.1|Name=mRNA_M-pyrifera_M_contig89113.20660.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig89113:15..809+ (Macrocystis pyrifera P11B4 male)back to top |