mRNA_M-pyrifera_M_contig89040.20641.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 3.910e-15 Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 34 DVGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 D G + LK VL+G G AGKTS L+ S ++RTVGVE ++QL A P +A +L ++ WDFAGQ Y TH FLTPG+LFVLV+D+ +++ S + + WLD + +R Sbjct: 211 DFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQL-------------APGPANGGSRGNA-ELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQAR 337
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 9.670e-15 Identity = 50/141 (35.46%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 34 DVGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 D G + LK VL+G G AGKTS L+ S +RTVGVE +++L G P + +L ++ WDFAGQ Y TH FLTPG+LFVLV+D+ +++ S + + WLD + +R Sbjct: 39 DFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRL--------------GSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQAR 165
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 1.900e-12 Identity = 50/147 (34.01%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 19 YYHDLD-VGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 + DLD G + LK VL+G G AGKTS L+ ++ + ++RTVGVE +++L G P + +L + WDFAGQ Y TH FLTPG+LFVLV+D+ + + S + + WL+ + +R Sbjct: 341 FLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDR-LGSSCPKPEERTVGVEIRDIKL--------------GPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTEGQ-SREDALEQWLEILQAR 471
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A0M0JFJ9_9EUKA (Leucine rich repeat-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFJ9_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 2.940e-12 Identity = 50/150 (33.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 10 LRQYYHDLDV-GSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 LR+Y+ ++ G+ + K VL+G G+AGK+STLR ++ G + R G + +QLD+ W L G PP D R + L AWDFAGQ +Y+A +L G+L++L++ R D E+ + WLDA+ ++ Sbjct: 205 LRRYFEAVERHGATTSRRAKMVLVGTGKAGKSSTLRGMKYG---------EPRPFGDDERTVQLDI----WTLAL---GEPPAPGAEEDMR-IVLSAWDFAGQPEYAAGQQQYLIKGALYLLLVPAHRATDEEVDEVLF--RWLDALQAK 335
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A7S2D8Y6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D8Y6_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 6.240e-12 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 40 GSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 G+ + K VL+G G+AGK+STLR ++ G + R G + +QLD+ W L A P + D D R L L AWDFAGQ +Y+A +L G+L++L++ V R D E WLDA+ ++ Sbjct: 4 GATTSRRAKMVLVGTGKAGKSSTLRGMKHG---------ESRPFGEDERTVQLDI----WTVALGEA--PSI--DEEDTR-LILSAWDFAGQPEYAAGQQQYLIKGALYLLLVPVHRATDEEADEVLL--RWLDALQAK 122
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 8.670e-12 Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 1 Query: 34 DVGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 D G LK VL+G G AGKTS L+ G ++ + ++RTVGVE +++L G P +L + WDFAGQ Y TH FLTPG+LFVLV+D+ + S + + WL+ + +R Sbjct: 92 DYGRAWYNRLKVVLVGLGEAGKTSIATRLE-GRLGSSCPKPEERTVGVEIRDIKL--------------GPGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYEVGQ-SKEDALEQWLEILQAR 216
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A7J4FT26_9EURY (GTP-binding protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A7J4FT26_9EURY) HSP 1 Score: 69.7 bits (169), Expect = 5.230e-11 Identity = 49/142 (34.51%), Postives = 69/142 (48.59%), Query Frame = 1 Query: 7 TLRQYYHDLDVGSC-PNTHLKCVLLGRGRAGKTSTL-RVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWV 426 T+ YY + G+ P K +L+G+G GKTS + R+L H+++T G+E E Q+ A D +++ L WDF GQ ATH FFLT SL++LVLD ARL D E +YW+ Sbjct: 79 TIINYYLQHETGATKPLNEAKMLLVGQGSVGKTSLVKRMLWD-----EFDPHEEKTEGIEIEEWQV----------------------AVDDQKIGLNVWDFGGQEIMHATHQFFLTKRSLYLLVLD-ARLGDEENRIEYWL 192
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: Q648Z4_9ARCH (Leucine-rich-repeat protein n=1 Tax=uncultured archaeon GZfos35D7 TaxID=285404 RepID=Q648Z4_9ARCH) HSP 1 Score: 69.7 bits (169), Expect = 5.350e-11 Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 1 Query: 7 TLRQYYHDLDVGSC-PNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWV 426 T+ YY + G P K +L+G+G GKTS ++ L + H+++T G+E E Q+ +D +++ L WDF GQ ATH FFLT SL++LVLD ARL D E +YW+ Sbjct: 112 TIINYYLQHETGEKKPLNEAKMILVGQGSVGKTSLVKRLLWDEFNL----HEEKTKGIEIEEWQVTVDN----------------------QKIRLNVWDFGGQEIMHATHQFFLTKRSLYLLVLD-ARLGDEENRIEYWL 225
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: A0A2G6E9H2_9BACT (GTPase n=1 Tax=candidate division KSB3 bacterium TaxID=2044937 RepID=A0A2G6E9H2_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 5.580e-11 Identity = 51/146 (34.93%), Postives = 65/146 (44.52%), Query Frame = 1 Query: 19 YYHDLDVGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWVGAWLDAVASR 456 + +L GS K +L+G G GKTS LR L+ V D T G++ L V H DA +HL++WDF GQ Y ATH FFLT SLFVLV + AR + YW LD + +R Sbjct: 345 FLQELQDGSSQQWRSKLILVGEGGVGKTSLLRALKH----EPFVEGLDTTHGIQTSMLN-------------------VPHPENDAVSMHLQSWDFGGQEIYHATHQFFLTDRSLFVLVWN-ARHGYEQGKIYYW----LDQIQAR 462
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Match: L8GPG0_ACACA (Leucine-rich repeat and WD repeat-containing protein 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPG0_ACACA) HSP 1 Score: 69.3 bits (168), Expect = 7.990e-11 Identity = 46/138 (33.33%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 19 YYHDLDVGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGG--RSAAAVRHDDRTVGVEAHELQLDLDAAQWNALLRRAGHPPVAHDAADARQLHLRAWDFAGQSQYSATHGFFLTPGSLFVLVLDVARLADNELSFQYWV 426 Y L G P LK + +G+ GKTS +R LQ G R + RHD + A +D WN + P DA + L AWDFAGQ Y ATH FFL+ SLF+++ ++ + + + +YW+ Sbjct: 660 YLGQLLKGQEPCYRLKVMFVGQENVGKTSVMRALQRKGVSRKSTITRHDTISPTHAAPVSTDGIDINGWNMPMDPVWGP-------DAPHVELSAWDFAGQEIYYATHQFFLSERSLFLVLFNLTSIVQSRV--EYWL 788 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89040.20641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89040.20641.1 >prot_M-pyrifera_M_contig89040.20641.1 ID=prot_M-pyrifera_M_contig89040.20641.1|Name=mRNA_M-pyrifera_M_contig89040.20641.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp MRTLRQYYHDLDVGSCPNTHLKCVLLGRGRAGKTSTLRVLQSGGRSAAAVback to top mRNA from alignment at M-pyrifera_M_contig89040:74..529- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89040.20641.1 ID=mRNA_M-pyrifera_M_contig89040.20641.1|Name=mRNA_M-pyrifera_M_contig89040.20641.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig89040:74..529- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89040:74..529- >mRNA_M-pyrifera_M_contig89040.20641.1 ID=mRNA_M-pyrifera_M_contig89040.20641.1|Name=mRNA_M-pyrifera_M_contig89040.20641.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig89040:74..529- (Macrocystis pyrifera P11B4 male)back to top |