mRNA_M-pyrifera_M_contig88918.20626.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A397C456_9STRA (EF-hand domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C456_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.660e-48 Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 1 GGGDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTASGE-VVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 G GDEFMAVKPW+GAI+EPT + + +EAP ++LEL +V+GY G NN+ + A ++YHAAA+G+VY+K+ H Q FH HTDD++CLAVHP G LV +GE GR PK+I+WD +S SL VL GFHKRGV HVAF+ + Sbjct: 1438 GKGDEFMAVKPWVGAIREPTNWTSKPDDNEAPLSSLELSFVYGYRGFDTRNNLSFGADANTIIYHAAALGIVYDKQHHRQIFHYGHTDDIMCLAVHPEGHLVASGERGRTPKVILWDANSGSSLCVLSGFHKRGVSHVAFNTK 1580
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A3R6Y278_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Y278_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.660e-48 Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 1 GGGDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTASGE-VVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 G GDEFMAVKPW+GAI+EPT + + +EAP ++LEL +V+GY G NN+ + A ++YHAAA+G+VY+K+ H Q FH HTDD++CLAVHP G LV +GE GR PK+I+WD +S SL VL GFHKRGV HVAF+ + Sbjct: 1247 GKGDEFMAVKPWVGAIREPTNWTSKPDDNEAPLSSLELSFVYGYRGFDTRNNLSFGADANTIIYHAAALGIVYDKQHHRQIFHYGHTDDIMCLAVHPEGHLVASGERGRTPKVILWDANSGSSLCVLSGFHKRGVSHVAFNTK 1389
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: W4GYR1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYR1_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.670e-48 Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 1 GGGDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTASGE-VVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 G GDEFMAVKPW+GAI+EPT + + +EAP ++LEL +V+GY G NN+ + A ++YHAAA+G+VY+K+ H Q FH HTDD++CLAVHP G LV +GE GR PK+I+WD +S SL VL GFHKRGV HVAF+ + Sbjct: 1608 GKGDEFMAVKPWVGAIREPTNWTSKPDDNEAPLSSLELSFVYGYRGFDTRNNLSFGAGANTIIYHAAALGIVYDKQHHRQIFHYGHTDDIMCLAVHPEGHLVASGERGRTPKVILWDANSGSSLCVLSGFHKRGVSHVAFNTK 1750
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A024U2H9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2H9_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.280e-48 Identity = 80/141 (56.74%), Postives = 107/141 (75.89%), Query Frame = 1 Query: 7 GDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTA-SGEVVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 GDEFMAVKPWLGAI+EP+ + P+ +EAP ++LEL +V+GY G NN+ Y A + +VYHAAA+G+VY+ ++H Q FH HTDD++CLAVHP G +V +GE GR PK+I+WD +S +L VL GFH+RGV HVAF+ R Sbjct: 1601 GDEFMAVKPWLGAIREPSNWTPKPDDAEAPQSSLELSFVYGYRGFDTRNNLSYGADTNTIVYHAAALGIVYDVQQHRQIFHYGHTDDIMCLAVHPEGHVVASGERGRMPKVILWDANSGSTLCVLSGFHQRGVSHVAFNCR 1741
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A485L4K3_9STRA (Aste57867_15986 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4K3_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.000e-47 Identity = 79/141 (56.03%), Postives = 104/141 (73.76%), Query Frame = 1 Query: 7 GDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTA-SGEVVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 GDEF+AVKPWLGAI+EPT + ++ E P ++LEL +V+GY G NN+ Y A + ++YHAAA+GVVY+K +H Q FH HTDD++CL VHP G LV TGE G+ PK+IVWD +S SL V+ GFHKRG+ HVAF+ + Sbjct: 1588 GDEFLAVKPWLGAIREPTNWTAKKDDLEEPASSLELSFVYGYRGFDTRNNLDYGADTNTIIYHAAALGVVYDKSQHRQIFHYGHTDDIMCLTVHPEGHLVATGERGKCPKVIVWDANSGSSLCVIVGFHKRGISHVAFNTK 1728
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A7S1CBA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA4_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.380e-47 Identity = 77/142 (54.23%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 1 GGGDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTASGEVVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 GGGDEFMAVKPWLGAI EPT P + PD L LEWVHGY +N+RYT +GE+VY AAAVG+ N E+ QRF++ H DDV+CLA+HP+G V TG+ GR+P+++VW +M +++V++GFH+R V VAFD + Sbjct: 83 GGGDEFMAVKPWLGAIVEPT--VPPKFDPSVPDMELSLEWVHGYRAQDARDNLRYTKAGEMVYTAAAVGITLNTEKWLQRFNLTHNDDVICLAMHPDGIHVATGQMGRKPRVVVWRTDTMETVSVIEGFHRRAVCAVAFDKK 222
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A067BPL2_SAPPC (EF-hand domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPL2_SAPPC) HSP 1 Score: 170 bits (430), Expect = 3.250e-46 Identity = 78/140 (55.71%), Postives = 101/140 (72.14%), Query Frame = 1 Query: 4 GGDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTA-SGEVVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFD 420 GGDEF+AVKPWLGAI+EP+ + + +AP L+L +VHGY G NN+R+ A S +YH AA+GVVYNK+ H Q FH HT+D+LCLAVHP G LVV+GE G+ PK+I+WD +S SL + GFH+RGV VAF+ Sbjct: 1579 GGDEFLAVKPWLGAIREPSGWTSKPDDGDAPSGNLDLVFVHGYRGFDTRNNLRFGADSSSCIYHTAALGVVYNKQTHRQIFHYGHTNDILCLAVHPEGHLVVSGEVGKTPKLILWDANSGSSLCTMAGFHRRGVALVAFN 1718
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A6G0WWN9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWN9_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.260e-46 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1 Query: 7 GDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTA-SGEVVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFDPR 426 GDE +AVKPW GAI+EPT + P+ G P ++LEL +V+GY G+ NN+ Y A + +VYH AAVG+VY+K+ H Q FH +HT + CLAVHP G LV TGE GR PK+IVWD +S SL +L GFH RG+ HV F+ R Sbjct: 1609 GDEALAVKPWRGAIREPTNWSPKPGDDNEPTSSLELSFVYGYRGYDLRNNIDYGADTNTIVYHTAAVGIVYDKQTHRQIFHFDHTKAITCLAVHPEGHLVATGEQGRLPKVIVWDANSGSSLCILSGFHSRGISHVTFNAR 1749
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A1V9YC52_9STRA (Microtubule-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC52_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.830e-44 Identity = 80/140 (57.14%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 7 GDEFMAVKPWLGAIKEPTWY--KPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTASGEV-VYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAF 417 GDEF+AVKPWLGAI+EP+ + KP GA AP L+L +VHGY G NN+RY A +YH AAVG+VY+K H Q FH HTDD++CLAVHP G LV TGE G+ PK+I+WD +S SL + GFH+RGV VAF Sbjct: 1594 GDEFLAVKPWLGAIREPSGWTAKPEDGA--APAGQLDLAFVHGYRGFDTRNNLRYGADASTCIYHTAAVGIVYSKAHHRQIFHFGHTDDIVCLAVHPEGHLVATGETGKTPKLILWDANSGSSLCTIVGFHRRGVALVAF 1731
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Match: A0A024UD07_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD07_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.650e-44 Identity = 72/138 (52.17%), Postives = 98/138 (71.01%), Query Frame = 1 Query: 7 GDEFMAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTASGEVVYHAAAVGVVYNKERHTQRFHVEHTDDVLCLAVHPNGRLVVTGEAGRRPKIIVWDCHSMRSLAVLQGFHKRGVVHVAFD 420 GDEFMAVKPW+GAI P+ P + P+ + L+WV GY NN+RY A+G++VYHAAAVG++Y+++ +TQ+ H+ HTDD+LC+A+ P+GR V TGE G++P I VWD S +L+VL GFH RGVV V F Sbjct: 1658 GDEFMAVKPWIGAITAPS--NPPKENPREPEVTMHLDWVFGYQTELSRNNLRYNANGQIVYHAAAVGIMYDRDTNTQKHHLGHTDDILCMAMSPSGRFVATGERGKKPTIRVWDAKSGATLSVLAGFHSRGVVSVTFS 1793 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88918.20626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88918.20626.1 >prot_M-pyrifera_M_contig88918.20626.1 ID=prot_M-pyrifera_M_contig88918.20626.1|Name=mRNA_M-pyrifera_M_contig88918.20626.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp MAVKPWLGAIKEPTWYKPRRGASEAPDAALELEWVHGYAGHRCSNNVRYTback to top mRNA from alignment at M-pyrifera_M_contig88918:315..743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88918.20626.1 ID=mRNA_M-pyrifera_M_contig88918.20626.1|Name=mRNA_M-pyrifera_M_contig88918.20626.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig88918:315..743+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88918:315..743+ >mRNA_M-pyrifera_M_contig88918.20626.1 ID=mRNA_M-pyrifera_M_contig88918.20626.1|Name=mRNA_M-pyrifera_M_contig88918.20626.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig88918:315..743+ (Macrocystis pyrifera P11B4 male)back to top |