mRNA_M-pyrifera_M_contig88905.20624.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A3C1NVI3_9GAMM (AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C1NVI3_9GAMM) HSP 1 Score: 491 bits (1265), Expect = 7.040e-169 Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 1 Query: 1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGRP 810 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAP+GISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLL+STVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGI SGRP Sbjct: 245 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPNGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLSSTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGIASGRP 514
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A2E7C138_9GAMM (Acriflavine resistance protein B n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C138_9GAMM) HSP 1 Score: 444 bits (1142), Expect = 4.610e-146 Identity = 235/270 (87.04%), Postives = 253/270 (93.70%), Query Frame = 1 Query: 1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGRP 810 +VLLR TA+G IRVGDIA+VYRA++TPP +RVLV+G EGILIGVAMKDGLQVDRWAADF+ F+ Y LAP G+SIE+SYDQSVYTEERLRSVV NLALGV+LVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYH+GIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRL+DHGDSPLSSITGAVSRLR+PLL+STVTTVLAF PMVILPGP+GDFMGSIAIAVV+MLTGSLLLALIVTPVLAAWLLPRGL RSG WWEMGI SG P Sbjct: 245 DVLLRTTAEGGTIRVGDIAEVYRAQATPPDSRVLVKGVEGILIGVAMKDGLQVDRWAADFSTFLEGYRALAPQGVSIEVSYDQSVYTEERLRSVVGNLALGVVLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHSGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLVDHGDSPLSSITGAVSRLRIPLLSSTVTTVLAFTPMVILPGPAGDFMGSIAIAVVIMLTGSLLLALIVTPVLAAWLLPRGLARSGHWWEMGIDSGTP 514
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A2N5Y1G0_9GAMM (AcrB/AcrD/AcrF family protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y1G0_9GAMM) HSP 1 Score: 399 bits (1025), Expect = 9.630e-129 Identity = 213/269 (79.18%), Postives = 236/269 (87.73%), Query Frame = 1 Query: 1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGR 807 +V+LRA ADG I + DIA VY+ RSTPPAARVL QG EGIL+G+AM DGLQVD+W+ FTDFVA Y L+P G++IEISYDQSVYT ERL+ V ANLA+GV+LV+LVLLFTMGWRAA+VVA ILPLC+LFSI VLY G+AIHQMSVTGLVVALGLLVDGSIVMTDE+RKRLIDHGDS S+ITGAV RLR+PLL+S TTVLAFMPMVILPGPSGDFMGSIAIAVVVML GSLLLALIVTPVLAAWLLP+GLTR G WWE GI SGR Sbjct: 245 DVVLRADADGGGILLRDIARVYKTRSTPPAARVLAQGKEGILVGIAMTDGLQVDKWSKQFTDFVADYRLLSPRGVNIEISYDQSVYTVERLKGVSANLAVGVVLVILVLLFTMGWRAALVVAFILPLCSLFSIAVLYQLGVAIHQMSVTGLVVALGLLVDGSIVMTDEVRKRLIDHGDSATSAITGAVGRLRIPLLSSATTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLVGSLLLALIVTPVLAAWLLPKGLTRKGHWWETGIDSGR 513
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: UPI0019D3723D (efflux RND transporter permease subunit n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3723D) HSP 1 Score: 331 bits (849), Expect = 5.920e-103 Identity = 181/268 (67.54%), Postives = 215/268 (80.22%), Query Frame = 1 Query: 1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804 +V++ A+ G A+R+ DIA VY+AR+TPP A LV G G+L+ VAM +GLQVDRW+A F F + AP GI +E +YDQSVYTE RLR V NL LGV+LVLLVLLFT+GWRAAVVVA +LPLC L S+ +LY+ G+AIHQMSVTGL+VALGLLVDGSIVMTDEIRKRL GD+PL +I+ +V RLRVPLL+STVTTVLAFMPMV+LPGPSGDFMGSIA +VVVML SL+LAL++TPVLAA LLP GL G WWE G+ SG Sbjct: 245 DVIVAASPGGGAVRISDIARVYKARTTPPPAMALVNGKPGLLVAVAMSEGLQVDRWSARFAAFAERWRAQAPAGIVLETTYDQSVYTEARLRGVAQNLVLGVVLVLLVLLFTLGWRAAVVVALVLPLCGLMSVALLYYWGVAIHQMSVTGLIVALGLLVDGSIVMTDEIRKRL-RAGDAPLPAISASVQRLRVPLLSSTVTTVLAFMPMVVLPGPSGDFMGSIAKSVVVMLASSLVLALVLTPVLAARLLPAGLGGHGHWWEQGLRSG 511
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A7W2YIZ3_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2YIZ3_9GAMM) HSP 1 Score: 329 bits (844), Expect = 3.050e-102 Identity = 175/262 (66.79%), Postives = 208/262 (79.39%), Query Frame = 1 Query: 25 DGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGRP 810 DG + V DIA VY+ S+PP A L+ G GILIG+AM DGLQVD W+ +F DF + AP +S+E +YDQSVYT+ERL+ V NL LGV+LVLLVLLFT+GWRAA+VVA ILPLC L SIT+LY+ G+A+HQMSVTG+VVALGLLVDGSIVMTDE+RKRL G +PL++IT AV+RLR+PLL+ST TT+LAFMPMV+LPGPSGDFMG+IA +VVVML SLLLAL +TPVLAAWLLP GL WWE G GRP Sbjct: 253 DGNTVTVADIAKVYKTSSSPPPAMALINGQPGILIGIAMSDGLQVDVWSKNFADFADQWQASAPQAVSLESTYDQSVYTQERLKEVAQNLLLGVVLVLLVLLFTLGWRAAIVVAVILPLCALMSITLLYYWGVALHQMSVTGMVVALGLLVDGSIVMTDEVRKRL-QRGLTPLAAITTAVTRLRIPLLSSTATTILAFMPMVVLPGPSGDFMGTIAKSVVVMLASSLLLALTITPVLAAWLLPAGLRWDSHWWERGAEGGRP 513
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: UPI001677C0D9 (efflux RND transporter permease subunit n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI001677C0D9) HSP 1 Score: 327 bits (838), Expect = 2.700e-101 Identity = 181/268 (67.54%), Postives = 214/268 (79.85%), Query Frame = 1 Query: 1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804 EV++R TADG A+R+ DIA VY+A TPP + QG IL+GV+MK+GLQVDRW+ADF DF+ + AP GI IE SYDQS YT ERL V ANLA+GV LV+LVLLFT+GWRAAVVVA ILPLC+L S+T+LY+ + IHQMSVTGLVVALGLLVDGSIV+TDE+RKRL+D G S +IT +VSR+RVPLL+ST TTVLAF PMVIL GP+GDF+GSIA +VVVML SL+LAL VTPVLAA LLP GL R G WW +G+ SG Sbjct: 245 EVIVRTTADGRAVRIADIASVYKAAVTPPRSLAFSQGHPSILVGVSMKEGLQVDRWSADFDDFMNDFRANAPAGIIIETSYDQSGYTRERLNGVAANLAIGVSLVILVLLFTLGWRAAVVVAVILPLCSLMSLTLLYYIDVPIHQMSVTGLVVALGLLVDGSIVVTDEVRKRLLD-GRSAGQAITDSVSRMRVPLLSSTATTVLAFTPMVILQGPAGDFLGSIATSVVVMLGSSLVLALTVTPVLAARLLPGGLERGGHWWNLGMDSG 511
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A5C9A026_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A026_9GAMM) HSP 1 Score: 324 bits (830), Expect = 3.240e-100 Identity = 177/261 (67.82%), Postives = 209/261 (80.08%), Query Frame = 1 Query: 25 DGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGR 807 DG +RVGDIA VY++R TPP A LV G GIL+ VAM G QVDRW+ADF F + AP GI + +YDQSVYTE RL+ VV NL LGV LVLLVLL T+GWRAAVVVA ILPLC L S+T+LY+ G+AIHQMSVTGL+VALGL+VDGSIVMTDEIRKRL+ G++P+ +I G+V RLR+PLL+ST+TT+LAFMP+V+LPGP+GDFMGSIA AVVVML SLLLA+ +TPVLAA LLP GLTR WWE G+ SGR Sbjct: 252 DGGGVRVGDIARVYKSRVTPPPAMALVDGKPGILVAVAMTGGQQVDRWSADFARFTEQWRAQAPAGIELVTTYDQSVYTEARLQGVVENLVLGVSLVLLVLLATLGWRAAVVVAVILPLCGLMSVTLLYYWGVAIHQMSVTGLIVALGLVVDGSIVMTDEIRKRLL-AGEAPVMAIRGSVRRLRIPLLSSTLTTILAFMPLVVLPGPAGDFMGSIAKAVVVMLGSSLLLAMTLTPVLAARLLPAGLTREHHWWEQGLDSGR 511
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A5C9A0S1_9GAMM (Efflux RND transporter permease subunit n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A0S1_9GAMM) HSP 1 Score: 321 bits (822), Expect = 4.820e-99 Identity = 173/269 (64.31%), Postives = 213/269 (79.18%), Query Frame = 1 Query: 1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGR 807 +V LRA + ++R+GDIA VY+AR+TPP A +V G GIL+ VAM DGLQVD W+ F FV+++ AP G+ + +YDQS+YTE RL+ V+ NL +GV LVLLVLL T+GWRAAVVVA ILPLC L S+T+LY+ G+AIHQMSVTGL+VALGL+VDGSIVMTDEIRK L G++PL +IT +V RLR+PLL+ST+TT+LAFMPMV+LPGPSGDFMGSIA AVVVML SLLLA+ +TPVLAA L+P L R WWE G+ SGR Sbjct: 245 DVSLRAGGNSGSVRIGDIARVYKARTTPPPAMAMVNGKPGILVAVAMSDGLQVDSWSRQFAAFVSAWREQAPAGLEVVTTYDQSIYTEARLQGVIENLVMGVALVLLVLLATLGWRAAVVVAVILPLCGLMSMTLLYYWGVAIHQMSVTGLIVALGLVVDGSIVMTDEIRKHL-QRGETPLQAITASVHRLRIPLLSSTLTTILAFMPMVVLPGPSGDFMGSIAKAVVVMLGSSLLLAMTLTPVLAARLIPGSLKREHHWWEQGMDSGR 512
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: UPI001A0B1F50 (Efflux RND transporter permease subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0B1F50) HSP 1 Score: 317 bits (811), Expect = 1.920e-97 Identity = 170/267 (63.67%), Postives = 212/267 (79.40%), Query Frame = 1 Query: 4 VLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804 V++ + A G+ R+ DIA V++A+STPP++ V+ QG GILI VAM DGLQVDRW+ F FVAS+ AP GI +E SY+QS YT ERL SV N+A+G++LV+LVLL TMGWRAAVVVA ILPLC L S+T+L G+AIHQMSVTGL+VALGLLVDGSIVMTDEIRK L G++P+ +++ ++ RLR PLLASTVTT+L+F+P+ ILPGP+GDFMGSIAI+V+ ML SL+LAL+ TPVLAAWLLPRGL WW+ GI SG Sbjct: 246 VIVNSDAAGSTTRISDIASVFKAQSTPPSSMVITQGKPGILIAVAMDDGLQVDRWSKSFAQFVASFREDAPQGILLEASYEQSGYTTERLSSVSKNMAVGIVLVILVLLVTMGWRAAVVVAVILPLCGLMSLTILDLMGMAIHQMSVTGLIVALGLLVDGSIVMTDEIRKHL-KRGETPIEALSQSIHRLRTPLLASTVTTILSFLPLAILPGPAGDFMGSIAISVIAMLVSSLILALVFTPVLAAWLLPRGLESHEGWWQRGIDSG 511
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: B8KGY6_9GAMM (Acriflavin resistance protein n=1 Tax=gamma proteobacterium NOR5-3 TaxID=566466 RepID=B8KGY6_9GAMM) HSP 1 Score: 311 bits (796), Expect = 1.190e-95 Identity = 168/267 (62.92%), Postives = 208/267 (77.90%), Query Frame = 1 Query: 4 VLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804 V++R G A+ V DIA VYRA TPP + L G GIL+GVAM DGLQVDRW+ DF F+ +Y AP GI I SY+Q+ YTE RL V++NLA+GV+LVLLVLLFT+G RAA VVA ILPLCTL S+ ++ G+ IHQMSVTGLVVALGLLVDGSIVMTDE+RKRL+D+ + PL +I +V R+R+PLL+ST TT+LAF+PMVILPGP+GDF+GSIA AVV+ML SL+LAL++TPVLAA +LP GL + WWE G++SG Sbjct: 246 VIVRTDRSGNAVSVSDIARVYRAEQTPPLSMALTDGRRGILLGVAMNDGLQVDRWSKDFDIFLNAYRAQAPAGIEITSSYNQATYTEARLAGVLSNLAIGVVLVLLVLLFTLGLRAAAVVAIILPLCTLVSLVIMNQIGLPIHQMSVTGLVVALGLLVDGSIVMTDEVRKRLLDN-EPPLDAIGDSVQRMRIPLLSSTATTILAFVPMVILPGPAGDFLGSIAKAVVIMLASSLVLALVITPVLAARMLPAGLNKGQHWWETGVSSG 511 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88905.20624.1 >prot_M-pyrifera_M_contig88905.20624.1 ID=prot_M-pyrifera_M_contig88905.20624.1|Name=mRNA_M-pyrifera_M_contig88905.20624.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGback to top mRNA from alignment at M-pyrifera_M_contig88905:3..812- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88905.20624.1 ID=mRNA_M-pyrifera_M_contig88905.20624.1|Name=mRNA_M-pyrifera_M_contig88905.20624.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig88905:3..812- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88905:3..812- >mRNA_M-pyrifera_M_contig88905.20624.1 ID=mRNA_M-pyrifera_M_contig88905.20624.1|Name=mRNA_M-pyrifera_M_contig88905.20624.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig88905:3..812- (Macrocystis pyrifera P11B4 male)back to top |