mRNA_M-pyrifera_M_contig88905.20624.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88905.20624.1
Unique NamemRNA_M-pyrifera_M_contig88905.20624.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A3C1NVI3_9GAMM (AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C1NVI3_9GAMM)

HSP 1 Score: 491 bits (1265), Expect = 7.040e-169
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 1
Query:    1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGRP 810
            EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAP+GISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLL+STVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGI SGRP
Sbjct:  245 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPNGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLSSTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGIASGRP 514          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A2E7C138_9GAMM (Acriflavine resistance protein B n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C138_9GAMM)

HSP 1 Score: 444 bits (1142), Expect = 4.610e-146
Identity = 235/270 (87.04%), Postives = 253/270 (93.70%), Query Frame = 1
Query:    1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGRP 810
            +VLLR TA+G  IRVGDIA+VYRA++TPP +RVLV+G EGILIGVAMKDGLQVDRWAADF+ F+  Y  LAP G+SIE+SYDQSVYTEERLRSVV NLALGV+LVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYH+GIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRL+DHGDSPLSSITGAVSRLR+PLL+STVTTVLAF PMVILPGP+GDFMGSIAIAVV+MLTGSLLLALIVTPVLAAWLLPRGL RSG WWEMGI SG P
Sbjct:  245 DVLLRTTAEGGTIRVGDIAEVYRAQATPPDSRVLVKGVEGILIGVAMKDGLQVDRWAADFSTFLEGYRALAPQGVSIEVSYDQSVYTEERLRSVVGNLALGVVLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHSGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLVDHGDSPLSSITGAVSRLRIPLLSSTVTTVLAFTPMVILPGPAGDFMGSIAIAVVIMLTGSLLLALIVTPVLAAWLLPRGLARSGHWWEMGIDSGTP 514          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A2N5Y1G0_9GAMM (AcrB/AcrD/AcrF family protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y1G0_9GAMM)

HSP 1 Score: 399 bits (1025), Expect = 9.630e-129
Identity = 213/269 (79.18%), Postives = 236/269 (87.73%), Query Frame = 1
Query:    1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGR 807
            +V+LRA ADG  I + DIA VY+ RSTPPAARVL QG EGIL+G+AM DGLQVD+W+  FTDFVA Y  L+P G++IEISYDQSVYT ERL+ V ANLA+GV+LV+LVLLFTMGWRAA+VVA ILPLC+LFSI VLY  G+AIHQMSVTGLVVALGLLVDGSIVMTDE+RKRLIDHGDS  S+ITGAV RLR+PLL+S  TTVLAFMPMVILPGPSGDFMGSIAIAVVVML GSLLLALIVTPVLAAWLLP+GLTR G WWE GI SGR
Sbjct:  245 DVVLRADADGGGILLRDIARVYKTRSTPPAARVLAQGKEGILVGIAMTDGLQVDKWSKQFTDFVADYRLLSPRGVNIEISYDQSVYTVERLKGVSANLAVGVVLVILVLLFTMGWRAALVVAFILPLCSLFSIAVLYQLGVAIHQMSVTGLVVALGLLVDGSIVMTDEVRKRLIDHGDSATSAITGAVGRLRIPLLSSATTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLVGSLLLALIVTPVLAAWLLPKGLTRKGHWWETGIDSGR 513          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: UPI0019D3723D (efflux RND transporter permease subunit n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3723D)

HSP 1 Score: 331 bits (849), Expect = 5.920e-103
Identity = 181/268 (67.54%), Postives = 215/268 (80.22%), Query Frame = 1
Query:    1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804
            +V++ A+  G A+R+ DIA VY+AR+TPP A  LV G  G+L+ VAM +GLQVDRW+A F  F   +   AP GI +E +YDQSVYTE RLR V  NL LGV+LVLLVLLFT+GWRAAVVVA +LPLC L S+ +LY+ G+AIHQMSVTGL+VALGLLVDGSIVMTDEIRKRL   GD+PL +I+ +V RLRVPLL+STVTTVLAFMPMV+LPGPSGDFMGSIA +VVVML  SL+LAL++TPVLAA LLP GL   G WWE G+ SG
Sbjct:  245 DVIVAASPGGGAVRISDIARVYKARTTPPPAMALVNGKPGLLVAVAMSEGLQVDRWSARFAAFAERWRAQAPAGIVLETTYDQSVYTEARLRGVAQNLVLGVVLVLLVLLFTLGWRAAVVVALVLPLCGLMSVALLYYWGVAIHQMSVTGLIVALGLLVDGSIVMTDEIRKRL-RAGDAPLPAISASVQRLRVPLLSSTVTTVLAFMPMVVLPGPSGDFMGSIAKSVVVMLASSLVLALVLTPVLAARLLPAGLGGHGHWWEQGLRSG 511          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A7W2YIZ3_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2YIZ3_9GAMM)

HSP 1 Score: 329 bits (844), Expect = 3.050e-102
Identity = 175/262 (66.79%), Postives = 208/262 (79.39%), Query Frame = 1
Query:   25 DGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGRP 810
            DG  + V DIA VY+  S+PP A  L+ G  GILIG+AM DGLQVD W+ +F DF   +   AP  +S+E +YDQSVYT+ERL+ V  NL LGV+LVLLVLLFT+GWRAA+VVA ILPLC L SIT+LY+ G+A+HQMSVTG+VVALGLLVDGSIVMTDE+RKRL   G +PL++IT AV+RLR+PLL+ST TT+LAFMPMV+LPGPSGDFMG+IA +VVVML  SLLLAL +TPVLAAWLLP GL     WWE G   GRP
Sbjct:  253 DGNTVTVADIAKVYKTSSSPPPAMALINGQPGILIGIAMSDGLQVDVWSKNFADFADQWQASAPQAVSLESTYDQSVYTQERLKEVAQNLLLGVVLVLLVLLFTLGWRAAIVVAVILPLCALMSITLLYYWGVALHQMSVTGMVVALGLLVDGSIVMTDEVRKRL-QRGLTPLAAITTAVTRLRIPLLSSTATTILAFMPMVVLPGPSGDFMGTIAKSVVVMLASSLLLALTITPVLAAWLLPAGLRWDSHWWERGAEGGRP 513          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: UPI001677C0D9 (efflux RND transporter permease subunit n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI001677C0D9)

HSP 1 Score: 327 bits (838), Expect = 2.700e-101
Identity = 181/268 (67.54%), Postives = 214/268 (79.85%), Query Frame = 1
Query:    1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804
            EV++R TADG A+R+ DIA VY+A  TPP +    QG   IL+GV+MK+GLQVDRW+ADF DF+  +   AP GI IE SYDQS YT ERL  V ANLA+GV LV+LVLLFT+GWRAAVVVA ILPLC+L S+T+LY+  + IHQMSVTGLVVALGLLVDGSIV+TDE+RKRL+D G S   +IT +VSR+RVPLL+ST TTVLAF PMVIL GP+GDF+GSIA +VVVML  SL+LAL VTPVLAA LLP GL R G WW +G+ SG
Sbjct:  245 EVIVRTTADGRAVRIADIASVYKAAVTPPRSLAFSQGHPSILVGVSMKEGLQVDRWSADFDDFMNDFRANAPAGIIIETSYDQSGYTRERLNGVAANLAIGVSLVILVLLFTLGWRAAVVVAVILPLCSLMSLTLLYYIDVPIHQMSVTGLVVALGLLVDGSIVVTDEVRKRLLD-GRSAGQAITDSVSRMRVPLLSSTATTVLAFTPMVILQGPAGDFLGSIATSVVVMLGSSLVLALTVTPVLAARLLPGGLERGGHWWNLGMDSG 511          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A5C9A026_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A026_9GAMM)

HSP 1 Score: 324 bits (830), Expect = 3.240e-100
Identity = 177/261 (67.82%), Postives = 209/261 (80.08%), Query Frame = 1
Query:   25 DGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGR 807
            DG  +RVGDIA VY++R TPP A  LV G  GIL+ VAM  G QVDRW+ADF  F   +   AP GI +  +YDQSVYTE RL+ VV NL LGV LVLLVLL T+GWRAAVVVA ILPLC L S+T+LY+ G+AIHQMSVTGL+VALGL+VDGSIVMTDEIRKRL+  G++P+ +I G+V RLR+PLL+ST+TT+LAFMP+V+LPGP+GDFMGSIA AVVVML  SLLLA+ +TPVLAA LLP GLTR   WWE G+ SGR
Sbjct:  252 DGGGVRVGDIARVYKSRVTPPPAMALVDGKPGILVAVAMTGGQQVDRWSADFARFTEQWRAQAPAGIELVTTYDQSVYTEARLQGVVENLVLGVSLVLLVLLATLGWRAAVVVAVILPLCGLMSVTLLYYWGVAIHQMSVTGLIVALGLVVDGSIVMTDEIRKRLL-AGEAPVMAIRGSVRRLRIPLLSSTLTTILAFMPLVVLPGPAGDFMGSIAKAVVVMLGSSLLLAMTLTPVLAARLLPAGLTREHHWWEQGLDSGR 511          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: A0A5C9A0S1_9GAMM (Efflux RND transporter permease subunit n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A0S1_9GAMM)

HSP 1 Score: 321 bits (822), Expect = 4.820e-99
Identity = 173/269 (64.31%), Postives = 213/269 (79.18%), Query Frame = 1
Query:    1 EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSGR 807
            +V LRA  +  ++R+GDIA VY+AR+TPP A  +V G  GIL+ VAM DGLQVD W+  F  FV+++   AP G+ +  +YDQS+YTE RL+ V+ NL +GV LVLLVLL T+GWRAAVVVA ILPLC L S+T+LY+ G+AIHQMSVTGL+VALGL+VDGSIVMTDEIRK L   G++PL +IT +V RLR+PLL+ST+TT+LAFMPMV+LPGPSGDFMGSIA AVVVML  SLLLA+ +TPVLAA L+P  L R   WWE G+ SGR
Sbjct:  245 DVSLRAGGNSGSVRIGDIARVYKARTTPPPAMAMVNGKPGILVAVAMSDGLQVDSWSRQFAAFVSAWREQAPAGLEVVTTYDQSIYTEARLQGVIENLVMGVALVLLVLLATLGWRAAVVVAVILPLCGLMSMTLLYYWGVAIHQMSVTGLIVALGLVVDGSIVMTDEIRKHL-QRGETPLQAITASVHRLRIPLLSSTLTTILAFMPMVVLPGPSGDFMGSIAKAVVVMLGSSLLLAMTLTPVLAARLIPGSLKREHHWWEQGMDSGR 512          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: UPI001A0B1F50 (Efflux RND transporter permease subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0B1F50)

HSP 1 Score: 317 bits (811), Expect = 1.920e-97
Identity = 170/267 (63.67%), Postives = 212/267 (79.40%), Query Frame = 1
Query:    4 VLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804
            V++ + A G+  R+ DIA V++A+STPP++ V+ QG  GILI VAM DGLQVDRW+  F  FVAS+   AP GI +E SY+QS YT ERL SV  N+A+G++LV+LVLL TMGWRAAVVVA ILPLC L S+T+L   G+AIHQMSVTGL+VALGLLVDGSIVMTDEIRK L   G++P+ +++ ++ RLR PLLASTVTT+L+F+P+ ILPGP+GDFMGSIAI+V+ ML  SL+LAL+ TPVLAAWLLPRGL     WW+ GI SG
Sbjct:  246 VIVNSDAAGSTTRISDIASVFKAQSTPPSSMVITQGKPGILIAVAMDDGLQVDRWSKSFAQFVASFREDAPQGILLEASYEQSGYTTERLSSVSKNMAVGIVLVILVLLVTMGWRAAVVVAVILPLCGLMSLTILDLMGMAIHQMSVTGLIVALGLLVDGSIVMTDEIRKHL-KRGETPIEALSQSIHRLRTPLLASTVTTILSFLPLAILPGPAGDFMGSIAISVIAMLVSSLILALVFTPVLAAWLLPRGLESHEGWWQRGIDSG 511          
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Match: B8KGY6_9GAMM (Acriflavin resistance protein n=1 Tax=gamma proteobacterium NOR5-3 TaxID=566466 RepID=B8KGY6_9GAMM)

HSP 1 Score: 311 bits (796), Expect = 1.190e-95
Identity = 168/267 (62.92%), Postives = 208/267 (77.90%), Query Frame = 1
Query:    4 VLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDGLQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLALGVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTGLVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTVTTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLLPRGLTRSGRWWEMGITSG 804
            V++R    G A+ V DIA VYRA  TPP +  L  G  GIL+GVAM DGLQVDRW+ DF  F+ +Y   AP GI I  SY+Q+ YTE RL  V++NLA+GV+LVLLVLLFT+G RAA VVA ILPLCTL S+ ++   G+ IHQMSVTGLVVALGLLVDGSIVMTDE+RKRL+D+ + PL +I  +V R+R+PLL+ST TT+LAF+PMVILPGP+GDF+GSIA AVV+ML  SL+LAL++TPVLAA +LP GL +   WWE G++SG
Sbjct:  246 VIVRTDRSGNAVSVSDIARVYRAEQTPPLSMALTDGRRGILLGVAMNDGLQVDRWSKDFDIFLNAYRAQAPAGIEITSSYNQATYTEARLAGVLSNLAIGVVLVLLVLLFTLGLRAAAVVAIILPLCTLVSLVIMNQIGLPIHQMSVTGLVVALGLLVDGSIVMTDEVRKRLLDN-EPPLDAIGDSVQRMRIPLLSSTATTILAFVPMVILPGPAGDFLGSIAKAVVIMLASSLVLALVITPVLAARMLPAGLNKGQHWWETGVSSG 511          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88905.20624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1NVI3_9GAMM7.040e-16998.89AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=H... [more]
A0A2E7C138_9GAMM4.610e-14687.04Acriflavine resistance protein B n=1 Tax=Haliea sp... [more]
A0A2N5Y1G0_9GAMM9.630e-12979.18AcrB/AcrD/AcrF family protein n=1 Tax=Kineobactrum... [more]
UPI0019D3723D5.920e-10367.54efflux RND transporter permease subunit n=1 Tax=Pa... [more]
A0A7W2YIZ3_9GAMM3.050e-10266.79Efflux RND transporter permease subunit n=1 Tax=Se... [more]
UPI001677C0D92.700e-10167.54efflux RND transporter permease subunit n=1 Tax=Ha... [more]
A0A5C9A026_9GAMM3.240e-10067.82Efflux RND transporter permease subunit n=1 Tax=Pa... [more]
A0A5C9A0S1_9GAMM4.820e-9964.31Efflux RND transporter permease subunit n=2 Tax=Pa... [more]
UPI001A0B1F501.920e-9763.67Efflux RND transporter permease subunit n=1 Tax=Pr... [more]
B8KGY6_9GAMM1.190e-9562.92Acriflavin resistance protein n=1 Tax=gamma proteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88905contigM-pyrifera_M_contig88905:3..812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score491.1
Seed ortholog evalue3.3e-136
Seed eggNOG ortholog1121937.AUHJ01000005_gene2323
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EggNOG OGs1MU48@1224,1RMBN@1236,464D1@72275,COG0841@1,COG0841@2
COG Functional cat.V
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816798.924331-CDS-M-pyrifera_M_contig88905:2..8121622816798.924331-CDS-M-pyrifera_M_contig88905:2..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88905 3..812 -
1692278185.365519-CDS-M-pyrifera_M_contig88905:2..8121692278185.365519-CDS-M-pyrifera_M_contig88905:2..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88905 3..812 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88905.20624.1prot_M-pyrifera_M_contig88905.20624.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88905 3..812 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88905.20624.1

>prot_M-pyrifera_M_contig88905.20624.1 ID=prot_M-pyrifera_M_contig88905.20624.1|Name=mRNA_M-pyrifera_M_contig88905.20624.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
EVLLRATADGAAIRVGDIADVYRARSTPPAARVLVQGAEGILIGVAMKDG
LQVDRWAADFTDFVASYNTLAPDGISIEISYDQSVYTEERLRSVVANLAL
GVLLVLLVLLFTMGWRAAVVVACILPLCTLFSITVLYHAGIAIHQMSVTG
LVVALGLLVDGSIVMTDEIRKRLIDHGDSPLSSITGAVSRLRVPLLASTV
TTVLAFMPMVILPGPSGDFMGSIAIAVVVMLTGSLLLALIVTPVLAAWLL
PRGLTRSGRWWEMGITSGRP
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mRNA from alignment at M-pyrifera_M_contig88905:3..812-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88905.20624.1 ID=mRNA_M-pyrifera_M_contig88905.20624.1|Name=mRNA_M-pyrifera_M_contig88905.20624.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig88905:3..812- (Macrocystis pyrifera P11B4 male)
GAAGTTTTACTGCGCGCTACGGCGGATGGAGCCGCGATACGGGTAGGCGA CATTGCCGATGTGTACCGCGCGCGCTCCACTCCGCCTGCCGCGCGGGTTC TGGTGCAGGGCGCGGAAGGTATCCTGATTGGCGTGGCGATGAAGGACGGC CTGCAGGTCGACCGCTGGGCCGCCGATTTCACCGATTTTGTGGCCAGCTA CAACACGCTGGCGCCGGATGGCATCAGTATCGAGATCAGCTACGATCAAA GCGTGTACACCGAAGAGCGCTTGCGCAGCGTTGTTGCCAACCTCGCGCTC GGCGTGTTGCTGGTACTGCTGGTGCTGCTGTTCACTATGGGCTGGCGCGC TGCGGTGGTGGTTGCCTGCATCCTGCCCCTGTGTACGTTGTTTTCCATCA CCGTCCTCTACCACGCCGGCATTGCGATCCACCAGATGTCGGTTACCGGG CTGGTGGTTGCGCTGGGGTTGCTGGTAGACGGCTCCATCGTCATGACTGA CGAAATCCGCAAACGCCTGATCGACCATGGCGACAGCCCGCTTTCCTCCA TTACCGGCGCGGTGTCACGGTTGCGCGTGCCCCTGCTGGCTTCAACGGTC ACCACGGTACTGGCATTCATGCCCATGGTGATTCTGCCTGGCCCCTCGGG GGACTTCATGGGGTCCATCGCCATCGCAGTGGTGGTCATGCTGACCGGTT CGCTGCTGCTGGCATTGATTGTCACGCCTGTGCTCGCCGCCTGGTTATTG CCGCGTGGACTGACGCGCAGCGGCCGCTGGTGGGAAATGGGTATCACCAG CGGCCGCCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88905:3..812-

>mRNA_M-pyrifera_M_contig88905.20624.1 ID=mRNA_M-pyrifera_M_contig88905.20624.1|Name=mRNA_M-pyrifera_M_contig88905.20624.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig88905:3..812- (Macrocystis pyrifera P11B4 male)
GAAGTTTTACTGCGCGCTACGGCGGATGGAGCCGCGATACGGGTAGGCGA
CATTGCCGATGTGTACCGCGCGCGCTCCACTCCGCCTGCCGCGCGGGTTC
TGGTGCAGGGCGCGGAAGGTATCCTGATTGGCGTGGCGATGAAGGACGGC
CTGCAGGTCGACCGCTGGGCCGCCGATTTCACCGATTTTGTGGCCAGCTA
CAACACGCTGGCGCCGGATGGCATCAGTATCGAGATCAGCTACGATCAAA
GCGTGTACACCGAAGAGCGCTTGCGCAGCGTTGTTGCCAACCTCGCGCTC
GGCGTGTTGCTGGTACTGCTGGTGCTGCTGTTCACTATGGGCTGGCGCGC
TGCGGTGGTGGTTGCCTGCATCCTGCCCCTGTGTACGTTGTTTTCCATCA
CCGTCCTCTACCACGCCGGCATTGCGATCCACCAGATGTCGGTTACCGGG
CTGGTGGTTGCGCTGGGGTTGCTGGTAGACGGCTCCATCGTCATGACTGA
CGAAATCCGCAAACGCCTGATCGACCATGGCGACAGCCCGCTTTCCTCCA
TTACCGGCGCGGTGTCACGGTTGCGCGTGCCCCTGCTGGCTTCAACGGTC
ACCACGGTACTGGCATTCATGCCCATGGTGATTCTGCCTGGCCCCTCGGG
GGACTTCATGGGGTCCATCGCCATCGCAGTGGTGGTCATGCTGACCGGTT
CGCTGCTGCTGGCATTGATTGTCACGCCTGTGCTCGCCGCCTGGTTATTG
CCGCGTGGACTGACGCGCAGCGGCCGCTGGTGGGAAATGGGTATCACCAG
CGGCCGCCCCGAAGTTTTACTGCGCGCTACGGCGGATGGAGCCGCGATAC
GGGTAGGCGACATTGCCGATGTGTACCGCGCGCGCTCCACTCCGCCTGCC
GCGCGGGTTCTGGTGCAGGGCGCGGAAGGTATCCTGATTGGCGTGGCGAT
GAAGGACGGCCTGCAGGTCGACCGCTGGGCCGCCGATTTCACCGATTTTG
TGGCCAGCTACAACACGCTGGCGCCGGATGGCATCAGTATCGAGATCAGC
TACGATCAAAGCGTGTACACCGAAGAGCGCTTGCGCAGCGTTGTTGCCAA
CCTCGCGCTCGGCGTGTTGCTGGTACTGCTGGTGCTGCTGTTCACTATGG
GCTGGCGCGCTGCGGTGGTGGTTGCCTGCATCCTGCCCCTGTGTACGTTG
TTTTCCATCACCGTCCTCTACCACGCCGGCATTGCGATCCACCAGATGTC
GGTTACCGGGCTGGTGGTTGCGCTGGGGTTGCTGGTAGACGGCTCCATCG
TCATGACTGACGAAATCCGCAAACGCCTGATCGACCATGGCGACAGCCCG
CTTTCCTCCATTACCGGCGCGGTGTCACGGTTGCGCGTGCCCCTGCTGGC
TTCAACGGTCACCACGGTACTGGCATTCATGCCCATGGTGATTCTGCCTG
GCCCCTCGGGGGACTTCATGGGGTCCATCGCCATCGCAGTGGTGGTCATG
CTGACCGGTTCGCTGCTGCTGGCATTGATTGTCACGCCTGTGCTCGCCGC
CTGGTTATTGCCGCGTGGACTGACGCGCAGCGGCCGCTGGTGGGAAATGG
GTATCACCAGCGGCCGCCCC
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