mRNA_M-pyrifera_M_contig88652.20589.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88652.20589.1 vs. uniprot
Match: R1E1M2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E1M2_EMIHU) HSP 1 Score: 87.0 bits (214), Expect = 2.330e-17 Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 1 RGIRARFPNANPEVDKYPNGWNNQKTNWHPHTPAPPSTYIDIPFNTTYP---NGMFSDFRIGLGGACDRFERSESYWC--QPGGRTAGETFFVRTPSGLDFTPSQLPNVGRWDTHATTRAHWWRGGHWFTLMAEI 390 R I AR+PNANPE+D++P G+ T W ++I+ T+ +F D+R G+GG C ++ SYWC +P G A E + PSGL FTPSQLP+ + + R WR GHW E+ Sbjct: 196 RAIPARYPNANPELDRFPIGYIQSSTKWSAPAELGMPSFIEYNDTATFRPSYRSLFKDYRGGVGGQCSVYDPPFSYWCAQRPEGGGASE---FQLPSGLSFTPSQLPSAP-YKNVSGGRITAWRPGHWANWQFEL 326
BLAST of mRNA_M-pyrifera_M_contig88652.20589.1 vs. uniprot
Match: A0A8B7D6L5_HYDVU (uncharacterized protein LOC101236102 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7D6L5_HYDVU) HSP 1 Score: 74.7 bits (182), Expect = 4.590e-13 Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 1 RGIRARFPNANPEVD---KYPNGWNNQKTNWHPHTPAPPSTYIDIPFNT-TYPNGMFSDFRIGLGGACDRFERSESYWCQPGGRTAGETFFVRTPSGLDFTPSQLPNVGRWDTHATTRAHWWRGGHWFTLMAEI 390 R ++ARFPNANPE+ +P G+ +Q +W P P S+ IDI + PN FS F +G+GG +FE SYW AG + V PSGL + N W +T H + G HW M ++ Sbjct: 7 RLVKARFPNANPEIQGLHTFPTGYIDQAASWLP--PKVASSPIDIKLQSPNRPNSYFSSFFVGIGGTVSQFEPPSSYWGSSS-PVAGSIYNV--PSGLRYYNDSEFNSRSWKNPSTGVVHAFHGDHWGNWMFKL 135
BLAST of mRNA_M-pyrifera_M_contig88652.20589.1 vs. uniprot
Match: UPI001F5FA66E (uncharacterized protein LOC101236102 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5FA66E) HSP 1 Score: 74.3 bits (181), Expect = 6.560e-13 Identity = 48/134 (35.82%), Postives = 65/134 (48.51%), Query Frame = 1 Query: 1 RGIRARFPNANPEVD---KYPNGWNNQKTNWHPHTPAPPSTYIDIPFNT-TYPNGMFSDFRIGLGGACDRFERSESYWCQPGGRTAGETFFVRTPSGLDFTPSQLPNVGRWDTHATTRAHWWRGGHWFTLMAEI 390 R ++ARFPNANPE+ +P G+ +Q +W P A P IDI + PN FS F +G+GG +FE SYW AG + V PSGL + N W +T H + G HW M ++ Sbjct: 318 RLVKARFPNANPEIQGLHTFPTGYIDQAASWLPPKVASPP--IDIKLQSPNRPNSYFSSFFVGIGGTVSQFEPPSSYWGSSS-PVAGSIYNV--PSGLRYYNDSEFNSRSWKNPSTGVVHAFHGDHWGNWMFKL 446
BLAST of mRNA_M-pyrifera_M_contig88652.20589.1 vs. uniprot
Match: X6LAJ9_RETFI (Zinc/iron permease (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LAJ9_RETFI) HSP 1 Score: 67.8 bits (164), Expect = 5.220e-11 Identity = 47/144 (32.64%), Postives = 67/144 (46.53%), Query Frame = 1 Query: 1 RGIRARFPNANPEVDKYPNGWNNQKTNWHPHTPAPPSTYIDIP---FNTTYP--------NG---MFSDFRIGLGGACDRFERSESYWCQPGGRTAGETFFVRTPSGLDFTPSQLPNVGRWDTHATTRAHWWRGGHWFTLMAEI 390 R IRAR+PNANPE++ + G +W PP+ + +P +N YP NG F + +G+GG CD F S YWC + G T + P+GL + + LP+ + WR GHW + M EI Sbjct: 108 RAIRARYPNANPEINGF--GSTLLAVSW-----VPPAMTVPLPLYEYNPDYPLRNDSTGTNGPSPYFWKYALGMGGICDNFTPSAGYWCSSVVQGGGATTY-NIPTGLVYNQTILPH-SPYANAVGGVIQAWRPGHWASWMFEI 242
BLAST of mRNA_M-pyrifera_M_contig88652.20589.1 vs. uniprot
Match: A0A7S2DRA9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DRA9_9EUKA) HSP 1 Score: 55.8 bits (133), Expect = 1.820e-6 Identity = 39/140 (27.86%), Postives = 64/140 (45.71%), Query Frame = 1 Query: 13 ARFPNANPEVDKYPNGWNNQKT------NWHPHTPAP---PSTYIDIPFNTTYPNGMFSDFRIGLGGACDRFERSESYWCQPGGRTAG----ETFFVRTPSGLDFTPSQLPNVGRWDTHAT-TRAHWWRGGHWFTLMAEI 390 AR+PNANPE D++P G+ +T +W P T +P P+ +++ + + F +R G+ G C + S+WCQ + G ET+ + PSGL L N + + WR HW + ++ Sbjct: 11 ARWPNANPETDRWPVGYRTSRTQYVPEGDWLPPTISPRPNPALTVEVASPNRHWDSYFGAYRGGINGTCSLYTPPFSFWCQSPPFSPGCGGCETWNI--PSGL--VARALANRTAYSARGRGAQLFAWRAAHWANWVFDV 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88652.20589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88652.20589.1 >prot_M-pyrifera_M_contig88652.20589.1 ID=prot_M-pyrifera_M_contig88652.20589.1|Name=mRNA_M-pyrifera_M_contig88652.20589.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp RGIRARFPNANPEVDKYPNGWNNQKTNWHPHTPAPPSTYIDIPFNTTYPNback to top mRNA from alignment at M-pyrifera_M_contig88652:411..800+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88652.20589.1 ID=mRNA_M-pyrifera_M_contig88652.20589.1|Name=mRNA_M-pyrifera_M_contig88652.20589.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig88652:411..800+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88652:411..800+ >mRNA_M-pyrifera_M_contig88652.20589.1 ID=mRNA_M-pyrifera_M_contig88652.20589.1|Name=mRNA_M-pyrifera_M_contig88652.20589.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig88652:411..800+ (Macrocystis pyrifera P11B4 male)back to top |