mRNA_M-pyrifera_M_contig8783.20410.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8783.20410.1
Unique NamemRNA_M-pyrifera_M_contig8783.20410.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 3.040e-113
Identity = 175/217 (80.65%), Postives = 186/217 (85.71%), Query Frame = 1 
Query:    1 SGVRGLQALVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEWT 651
            SG RGLQA+VDPGM+HGVDP WLHQV TGIAD        G  AAAV E++           +P++ LT  TE AITGLHDVL S+GVPSAYGISII FTLFVKG+TFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIK+W+
Sbjct:   56 SGARGLQAMVDPGMMHGVDPAWLHQVLTGIAD--------GDVAAAVAEEAAXXXX---XGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS 261
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.360e-78
Identity = 135/216 (62.50%), Postives = 159/216 (73.61%), Query Frame = 1 
Query:    1 SGVRGLQALVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 648
            SGV GL+AL D G    +D   LHQVF+G+ADA+ A  D    AAA    + GG+F           L  ATE AIT LHD L+  GV  +YG +II FTLF+KGVTFPLTYQQL+STTKMQTL PKVK++Q R ANNPEAAN+A+  LY+ E VNPL+GCLP+LAQIPIFISLYR+LLNLAKENKL E FLW+PSLEGP F +PPTE ++WIK W
Sbjct:   51 SGVGGLRALADGG----IDFTVLHQVFSGLADATAATAD----AAADAAANNGGVFAG---------LVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTW 249
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.430e-59
Identity = 101/200 (50.50%), Postives = 136/200 (68.00%), Query Frame = 1 
Query:   52 VDPVWLHQVFTGIA-DASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 648
            +DP+ L     G+A DA+D   +       V +  +GG         P+  L A T  AITGLHD+L+ LG+ + YG +II FTL +K VTFPL  +QL ST KMQ + PK++E+Q ++ANNPE ANQ + QLYQ  ++NPLAGCLP+LAQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ +   + + W+  W
Sbjct:   65 MDPLVLSHAVQGLAQDAADVASE-------VAKSDQGG--------GPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTW 249
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 191 bits (486), Expect = 9.520e-56
Identity = 106/221 (47.96%), Postives = 138/221 (62.44%), Query Frame = 1 
Query:   10 RGLQALVDPGMVHGV-------DPVWLHQVFTGIADASDAVM-DGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 648
            R L+A+VDPG V  V         VWL Q   G+ADA+ A   D  GA     E +             +     A E AIT +H+ L+  G+ + YG+SII FT+ VK VT PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K+W
Sbjct:   79 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAXXXXXXXGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 299
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 192 bits (488), Expect = 2.420e-55
Identity = 106/221 (47.96%), Postives = 139/221 (62.90%), Query Frame = 1 
Query:   10 RGLQALVDPGMVHGV-------DPVWLHQVFTGIADASDAVM-DGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 648
            R L+A+VDPG V  V         VWL Q   G+ADA+ A   D  GA     E +         +   +     A E AIT +H+ L+  G+ + YG+SII FT+ VK VT PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K+W
Sbjct:   41 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAADTAGAVEGSKEMTGAAXXXXXXNGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 261
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.390e-54
Identity = 105/221 (47.51%), Postives = 137/221 (61.99%), Query Frame = 1 
Query:   10 RGLQALVDPGMVHGV-------DPVWLHQVFTGIADASDAVM-DGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 648
            R L+A+VDPG V  V          WL Q   G+ADA+ A   D  GA     E +             +     A E AIT +H+ L+  G+ + YG+SII FT+ VK VT PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K+W
Sbjct:  141 RTLKAVVDPGHVAEVVHTHLPSSSAWLLQTLQGVADAAAATAPDAAGAVEGSKEMTSXXXXXXXXXXGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 361
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: L1IDX8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IDX8_GUITC)

HSP 1 Score: 171 bits (433), Expect = 9.420e-49
Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 1 
Query:   16 LQALVDPG--------MVHGVDPVWLH-QVFTGIADASDAV--MDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFD-----SPPTEMMSWI-KEWT 651
            +QA++ PG        ++H  DP  L   V    A   DA+  +    AAAA   + K G+FG+ ++L           T +T LH   +S G+P A+G +I  FT+FVK VT+PL ++Q+SST  +Q L PKVK +Q+RYAN+P+  N+ + +LY+TENVNPLAGCLP L QIP+FI LYRS+L LA+++ L ESFLWIPSL+GP  +       P +  +W+ K WT
Sbjct:   54 VQAVMMPGTEAASFLSLLHLADPSHLPADVAASTAALQDAMQLLSDAAAAAAETTEDKPGVFGSFVNL---------IVTCLTALHTAFKSAGIPGAWGYAIATFTIFVKAVTYPLNFKQMSSTIALQQLQPKVKAIQSRYANDPQTQNEKIAELYRTENVNPLAGCLPTLIQIPVFIGLYRSVLQLAQKDLLEESFLWIPSLQGPVGEYNAKTGLPIDATAWLFKGWT 273
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A7S2H5X8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.120e-48
Identity = 101/215 (46.98%), Postives = 131/215 (60.93%), Query Frame = 1 
Query:   25 LVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAA-----AVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPS-AYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KEW 648
            L+D     G D V    V TG AD++   +    +A+     A  + S  G FG         FLT   E  +  +H+ L S G+ + A+G+SII  TL +K  TFPLT  QL ST KMQ L P +KE QA+Y +NPE  NQ + ++YQT NVNPLAGC+P+L QIP+FI LYR++LNLAKEN L ESFLW+P+LEGPT+ + P     WI K W
Sbjct:   72 LLDAASTVGTD-VAQTVVTTGAADSAATAVGAAASASPEVMEAAADASNNGWFG---------FLTLPIEGLLNIIHNTLVSTGMDANAWGVSIIVMTLVIKAATFPLTKSQLESTNKMQALQPVIKEAQAKYQSNPEVMNQKIAEIYQTNNVNPLAGCVPSLVQIPVFIGLYRAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNW 276
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BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A7S0CAS3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAS3_9STRA)

HSP 1 Score: 171 bits (433), Expect = 8.020e-48
Identity = 82/150 (54.67%), Postives = 107/150 (71.33%), Query Frame = 1 
Query:  199 FLTAATETAITGLHDVLQSLGVPS-AYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKE 645
            FL    E  I  +H+ L  +G+ S ++G SII     +KG+TFPLT  QL ST+KMQ L PK+KE+QA+YA+NPE  NQ V   Y+   VNPLAGCLP+LAQ+PIFI LYR++LNLAK+N L ESFLW+PSLEGPT+ + P   + W+ +
Sbjct:   93 FLAGPIEETICVIHNALNGIGLSSNSWGASIIILIFLIKGLTFPLTKAQLESTSKMQVLQPKIKEIQAKYASNPEVMNQKVSSFYKDNEVNPLAGCLPSLAQLPIFIGLYRAVLNLAKQNTLDESFLWLPSLEGPTYGADPAHGLDWVTQ 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A1Z5JPG7_FISSO (YidC/Oxa1 family membrane protein insertase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPG7_FISSO)

HSP 1 Score: 171 bits (433), Expect = 9.110e-48
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 1 
Query:   82 TGIADASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPS-AYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KEWT 651
            T +ADA +   D    AA  V ++  G FG         FLT      +  +H  L ++GV + A+G+SII  TL +K VTFPLT  QL ST KMQ + P +KELQA+Y +NPE  NQ + + YQ+ ++NPLAGCLP+LAQIPIFI LYR++L+LA+ENKL E FLW+P+LEGPT+ + PT    W+ K WT
Sbjct:   61 TFLADAMEVTAD----AATEVAKTDNGWFG---------FLTGPIMFLLQLIHAGLVAVGVSANAWGVSIIAITLLIKAVTFPLTKTQLESTNKMQAMQPAIKELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWT 239
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC7_ECTSI3.040e-11380.65Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A835YLS0_9STRA2.360e-7862.50Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A7R9UFB5_9STRA6.430e-5950.50Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
W7U5Y4_9STRA9.520e-5647.96Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
K8YSD2_NANGC2.420e-5547.96Preprotein translocase subunit YidC n=2 Tax=Nannoc... [more]
A0A4D9D9H4_9STRA3.390e-5447.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
L1IDX8_GUITC9.420e-4944.10Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2H5X8_9STRA1.120e-4846.98Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0CAS3_9STRA8.020e-4854.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5JPG7_FISSO9.110e-4849.48YidC/Oxa1 family membrane protein insertase n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8783contigM-pyrifera_M_contig8783:331..5102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue3.4e-91
Seed eggNOG ortholog2880.D8LUC7
Preferred nameALB3.1
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019904,GO:0022607,GO:0031976,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045038,GO:0045184,GO:0046907,GO:0050789,GO:0050793,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051291,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070206,GO:0070208,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0090150,GO:0090342
EggNOG free text desc.membrane insertase activity
EggNOG OGsCOG0706@1,KOG1239@2759
Ec32 ortholog descriptionAlb3 homolog, thylakoidal inner membrane insertase
Ec32 orthologEc-14_004480.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Exons4
Model size651
Cds size651
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8783.20410.1prot_M-pyrifera_M_contig8783.20410.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8783 331..5102 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.899797-CDS-M-pyrifera_M_contig8783:330..4541622816787.899797-CDS-M-pyrifera_M_contig8783:330..454Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 331..454 -
1692278178.6664555-CDS-M-pyrifera_M_contig8783:330..4541692278178.6664555-CDS-M-pyrifera_M_contig8783:330..454Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 331..454 -
1622816787.9129307-CDS-M-pyrifera_M_contig8783:2390..25361622816787.9129307-CDS-M-pyrifera_M_contig8783:2390..2536Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 2391..2536 -
1692278178.6848013-CDS-M-pyrifera_M_contig8783:2390..25361692278178.6848013-CDS-M-pyrifera_M_contig8783:2390..2536Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 2391..2536 -
1622816787.9305756-CDS-M-pyrifera_M_contig8783:3667..39631622816787.9305756-CDS-M-pyrifera_M_contig8783:3667..3963Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 3668..3963 -
1692278178.705449-CDS-M-pyrifera_M_contig8783:3667..39631692278178.705449-CDS-M-pyrifera_M_contig8783:3667..3963Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 3668..3963 -
1622816787.9439065-CDS-M-pyrifera_M_contig8783:5017..51021622816787.9439065-CDS-M-pyrifera_M_contig8783:5017..5102Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 5018..5102 -
1692278178.7217205-CDS-M-pyrifera_M_contig8783:5017..51021692278178.7217205-CDS-M-pyrifera_M_contig8783:5017..5102Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8783 5018..5102 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8783.20410.1

>prot_M-pyrifera_M_contig8783.20410.1 ID=prot_M-pyrifera_M_contig8783.20410.1|Name=mRNA_M-pyrifera_M_contig8783.20410.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
SGVRGLQALVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAAAVVEQ
SKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFT
LFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLY
QTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGP
TFDSPPTEMMSWIKEWT
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mRNA from alignment at M-pyrifera_M_contig8783:331..5102-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8783.20410.1 ID=mRNA_M-pyrifera_M_contig8783.20410.1|Name=mRNA_M-pyrifera_M_contig8783.20410.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4772bp|location=Sequence derived from alignment at M-pyrifera_M_contig8783:331..5102- (Macrocystis pyrifera P11B4 male)
TCAGGGGTACGCGGACTCCAAGCGCTGGTGGACCCGGGGATGGTCCACGG
GGTGGACCCGGTCTGGTTGCACCAGGTCTTCACAGGTGAGAGGCCAGACT
TGACGGCTTACGTAGCCGGATTTTGGACAAACATGCTGCTTCGAACTGTA
TTTTCTGCGTCTATTCTTCAGTGGTGGCTCGAATCGTGCTTTTTTGTAGT
GAAAGTCTGCTGTAATTGAAGTCAGTTGGCTTGCTTCCGCCACCTAGTTG
GCTTACTTCTCCACCCATCCACGTATTTGCTGGTTGGCGACGTTGAAGCC
GGTCACCGGTCACGTAGAGAACGTTGGGTTCGCACGGTGGTGCGATTGTT
CCTCAGCGCTCGTATAGTTTTTTTCTCGACAACGGTAACATGGGTGCTGT
CTAAAAGTCGAACGTTGTTCGTATGTTCGGAAGGCTCTCTCGATCTCTCG
ATTTCGATCTCGAGCAGATTCTTTTCCGAAAACACGCTTACTTATTTCGG
TGTTGGCAACCTTAACCTTCCCCGTCCTGGAACAGTCGAGCGCTGAGAAG
CGATCGCCCGCATGCAGACGGGTATTTTCGGAAGTTGGTCTTGAATTAGA
CTTATTGTTAGTCAAACTCACAGCCGCCCTTATCGTAGTCCTTACCAGGT
ACCTGGTATAAGCTAAGCCTTTTAGGGCTGCAGTCCCGTTTTGGGGACTA
ACCACTCAGAATCTGAGTGGTGTGTGTCCAAAACGGGACTGCAGTACTAA
AGGGGTTAAACTTCCTATGTAGCAGTTTCACAGATAGGACTGGTGATGAT
CTACAGATAAATCACACAGATCGTCTACGTAGATCCTCACCCGCCGTATC
GAGAGAGGTCTTGGGATAGGTAGGGCGCAGACCCAAACTCAGGAAAAAAC
TGTCCCCTCTTAGTTCATGCGGGTTTTACGGCTCTCCTTCCCGGCAACAT
CGAGAGCTACTCAACGCACTCGTAGATCCCAATATACAGACCAGGAGGAG
AAATGTTATCAGCACTGAAGTATGTACATCATGAAGTGGGAATCGACGAA
CTGTCCGACGATCTGACTAAATATATATATATATATATGCTGTTGTTTTG
AACCAACCTGGGATATCTCTTTTGTCATGTGGCTGCCAGGAATTGCCGAT
GCCTCTGACGCGGTGATGGACGGAGGAGGGGCCGCGGCCGCGGTGGTGGA
GCAGTCCAAGGGGGGTCTGTTCGGGACCGGGTTGAGTCTCAACCCCGTGG
AGTTTCTCACCGCCGCGACGGAGACCGCGATCACGGGGCTGCACGATGTG
TTGCAGAGCCTCGGCGTGCCCTCGGCGTACGGCATCTCCATCATTTTTTT
CACGCTGTTCGTGAAGGGGGTCACCTTCCCCCTGACGTACCAGCAGCTCT
CGAGCACGACCAAGATGCAAACGCTCGGACCTAAGGTGCGACCACCCACT
CGCTTTGGGTTGGTCGGTCGGTCGGTCGGTCGGTTGGTTGGTTGGTTAGT
TGGTTGGGTGGAGTCCTCTCCCATTTTTTCTCGGCGAGGAACGGAAGGGG
GGGGGAGGGTCGGGGGGTGTGACTGGCGTTGCTGGGGAGGGGGGGGGACG
CTGGCGATGGGTGAGCGGGACTCGGGGGAGGGGGTGGGGTGGTGGTTAGC
AAGGCCAGGAGGGGGTGTACTCATTATCGTGCATGTGCGTAGTCGTACGA
CCATAGACCCTCGCATCCCTACAATGCCGGGACTGAGCATGTCGGGTTTT
AGTCGATCAGGCAGGCATTTTCTTGCTTGCACCAAGGGCGAGGTGGCGAG
TAGCCAGGGGGGGGGAGTCAGAGGCAGGGTAGGGAACTTGAAAGACATCC
GCGAGGGAGGGAGGAATTCCTTTCACCCTACTTGTGTGGTGTTCCTGTTT
AGTTTATTGCTACAAGTACCGTCCCCGCGGGCTACTACGCTAAGCGCTCT
TGGTCTGCCTCTCCCCGCTTGTCGTCGGTTCGGGGTTAAGTTTTGTTCTC
AAGAGTCCCTCCCGCGTATGGTTGGTCTGACAGTCCCGCCCGCGCGCGGT
CGATCTCAATCTCACCTTTTTGTTCACGAGTTTGGCGTAAGGTTCGATAA
ACAAATGCTGATGGTCTTATACCAGCTGGTCATTTACGTGTCCATTCGGA
GAAGTAGCTCAGGAAGCGGTCGGGGTTAGCGTTAGGTTTTACAGGCCAAG
GACATGTTAAGTATGTACCGATTTTTTCCTTCCGCTGGTCGTTATCCCTT
TCGTTTTGGAGCTGTGTAGACTTGGAAACTTCAACAGCTGGTGGACCTTT
CATTTTTTTCAGCCGCATAAAACGTCCTCGGAGTTTACATGGCGTCACCC
GGTCACCCCACGTCCGAATGCCGCCGAAGGGGGAAATCTTGTACGTTTCA
ACCTTTTTTTCGAAGCTGGACCAAGGTCTATACAGCCCTTTGTTTCACAG
TCCCGCGTCCTGATTGGTCGGCCTCACAGTCCTTTTTTTGTGGTTTGGTT
TTGGTTGGTCAGACAGTCCCGCGTGTGGTCCGGGTGCGCGCGAACGTATA
TTGACGCCTGCTACAGGTGAAGGAGCTGCAGGCGCGGTACGCGAACAACC
CCGAGGCGGCTAACCAGGCGGTCCAGCAGCTGTACCAGACGGAGAACGTC
AACCCGCTGGCCGGCTGCCTGCCCGCCCTCGCTCAGATCCCGATCTTCAT
CTCCCTTTACCGGTGCGTTCAAGCAGTCGCTTTTTTTCCACGTACCAGCA
GCGGCGGCAGTAGCGGCGGCAGTAGCGTCAGCGGTAAGTAGCAGTAGCAG
CGGCGGCAGCAGTACCAAGCAGCGGCGGCAGGAACAGCAGTAGTAAGAGC
AGCAGCGGCGGCGGCGGCGGTAGCGCTAGCAGTGAGTATTCTAAGAAAAT
ACTGCAAGGCATGCCTTATCGTTGATCCCCGTTTTTGTTTTTTGTCAATA
CACTCAAGAGAACATTATATGTACCGGTAAATAATATGCCAACGACGTTC
GAGATCCCCGTTTTATGTGAAAATGATATACCAGGTATATATATATGCGT
GTAGATCCTCGATCTCACAGCTGGTATTTTTTGTTTCATAAATATGTATA
GAGAGAGAGCTCTCCTTGTGCGAAGAGTCTAAAAACATTGGCAAAAGTAC
GAAAATTTGACAAATACTGTATACATACGTATACATACATGCGTGTAGAT
CCTCGAGTGAAGAATCTAAGAAAACTGTGCGATACTGCTGTAGGTGCTCC
CGCCCTTCTACGGCAGCACACGTCTTTCGTCACGTACCCGGTATACTAAT
TAACTTGACGTTATCGCAGTATTTTTTTCACGCCAGTATATATATGTAGG
TACATGTAGTGTATAGTTGTCGCGCCCTTTTCTCATGCTAGGGATATAAA
TATATATTATGTTACTGGTACATACTCCAACAGCACATGAAACCAAAAAG
ATGCGACATTTCAGAGGTACGTACGTACTAAATAAGGGCTCTCGTACTGA
ATCCAGGGAAATCGTCTCATCTACTCCCGCCGGAAAAAAAACTTTGAGCG
CCCTGCCACGAGCTTCAGAGTGCACAGATCCCGCCGAGACCTAGACCAAT
GTGTCCGGCCGGGTTTCCCGTGTCGAAGTACTTGCTGTTTTGCCGAAAAA
TGCTCGTGCGAAGAGAAAAGTTGGCAAAAGTACGAAAATTTGATAAACGT
ACGTATACATATATCATGTTATATATATTATGTACTATGTATGTTATATA
TTATATATCATACTATATTATATTATATATATTATACAGCAATCAATAAA
GGAATAACAAGATCAAGAATATTTAAAAAAATAGTTAAGAAAGTTAGCCA
CATAATAGTCCGTGCCTAGGGGAGTGGCGCAAAAACGAATTGAAGAACGA
TACGGATGATACAAAATATTACGACGTTATGGACCATGTGCACATCACTG
CTGTACGTATCACACGTAAATATACCACTCTGTACCGAAGTATAAGAACC
GTTTGGTTTAATAATTTATGTAAACCGGTTCTTATATTATGGGACAGAGT
GGCAAATTTATCTCTACGTCGCGAAAAACGTCTGTTCCCTCGCCTTGCAT
GCAGTCTGTTTTTGTCTGTCTATCTACACTGTATTTTGTTGTGGAACGTG
TTGATGGTGGTTATCAGAACCTAGTAGAGTGTGTAAACTTGGGGGAGAAC
ATGATTTTTAGGTCCGATCGTGGGGTCTTATTACCATGCCTCCTCGCAAT
AAGGCACCCACGAGGCAGTTAAATAGCAGTACTCCCACCGCTGTCTCTGT
GGAAGCGGCCACACCGGAAAATAAGTCAACTCGTTGAAGCTGTCGTCCGT
ATGCGAGAAAGTCCGCCTCACGAGCGGTTCTTGGCAGATAGGATGCAGCT
AGCTCACCCTTCATGCGACTGCTCGCCCTTCGGGACTCCTCACGTTTGGC
TTCGCAAAGCTTTTGGTGCAAGCAAATCGATGTCCGCCTGGTCGGTGGAA
ACCCGGTGTTCTGCTCCGTCCCGGCATTGTAGGGATGCGAGGGTCCATCT
ATGGCCGGCCATACGACTACTACGGCCATGCATAACATCGAGTACACCCG
CACCCCCTCCGGCGATGATGCTGTACGTACGCCTCGTGAATCGGCCAGGT
CGCTGTTGAACTTGGCGAAGGAAAACAAGCTGACGGAGAGCTTCCTATGG
ATACCCAGCCTCGAGGGCCCCACGTTCGACTCTCCGCCCACGGAGATGAT
GAGCTGGATCAAGGAGTGGACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8783:331..5102-

>mRNA_M-pyrifera_M_contig8783.20410.1 ID=mRNA_M-pyrifera_M_contig8783.20410.1|Name=mRNA_M-pyrifera_M_contig8783.20410.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig8783:331..5102- (Macrocystis pyrifera P11B4 male)
TCAGGGGTACGCGGACTCCAAGCGCTGGTGGACCCGGGGATGGTCCACGG
GGTGGACCCGGTCTGGTTGCACCAGGTCTTCACAGTCAGGGGTACGCGGA
CTCCAAGCGCTGGTGGACCCGGGGATGGTCCACGGGGTGGACCCGGTCTG
GTTGCACCAGGTCTTCACAGGAATTGCCGATGCCTCTGACGCGGTGATGG
ACGGAGGAGGGGCCGCGGCCGCGGTGGTGGAGCAGTCCAAGGGGGGTCTG
TTCGGGACCGGGTTGAGTCTCAACCCCGTGGAGTTTCTCACCGCCGCGAC
GGAGACCGCGATCACGGGGCTGCACGATGTGTTGCAGAGCCTCGGCGTGC
CCTCGGCGTACGGCATCTCCATCATTTTTTTCACGCTGTTCGTGAAGGGG
GTCACCTTCCCCCTGACGTACCAGCAGCTCTCGAGCACGACCAAGATGCA
AACGCTCGGACCTAAGGAATTGCCGATGCCTCTGACGCGGTGATGGACGG
AGGAGGGGCCGCGGCCGCGGTGGTGGAGCAGTCCAAGGGGGGTCTGTTCG
GGACCGGGTTGAGTCTCAACCCCGTGGAGTTTCTCACCGCCGCGACGGAG
ACCGCGATCACGGGGCTGCACGATGTGTTGCAGAGCCTCGGCGTGCCCTC
GGCGTACGGCATCTCCATCATTTTTTTCACGCTGTTCGTGAAGGGGGTCA
CCTTCCCCCTGACGTACCAGCAGCTCTCGAGCACGACCAAGATGCAAACG
CTCGGACCTAAGGTGAAGGAGCTGCAGGCGCGGTACGCGAACAACCCCGA
GGCGGCTAACCAGGCGGTCCAGCAGCTGTACCAGACGGAGAACGTCAACC
CGCTGGCCGGCTGCCTGCCCGCCCTCGCTCAGATCCCGATCTTCATCTCC
CTTTACCGGTGAAGGAGCTGCAGGCGCGGTACGCGAACAACCCCGAGGCG
GCTAACCAGGCGGTCCAGCAGCTGTACCAGACGGAGAACGTCAACCCGCT
GGCCGGCTGCCTGCCCGCCCTCGCTCAGATCCCGATCTTCATCTCCCTTT
ACCGGTCGCTGTTGAACTTGGCGAAGGAAAACAAGCTGACGGAGAGCTTC
CTATGGATACCCAGCCTCGAGGGCCCCACGTTCGACTCTCCGCCCACGGA
GATGATGAGCTGGATCAAGGAGTGGACGGTCGCTGTTGAACTTGGCGAAG
GAAAACAAGCTGACGGAGAGCTTCCTATGGATACCCAGCCTCGAGGGCCC
CACGTTCGACTCTCCGCCCACGGAGATGATGAGCTGGATCAAGGAGTGGA
CG
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