prot_M-pyrifera_M_contig8783.20410.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8783.20410.1
Unique Nameprot_M-pyrifera_M_contig8783.20410.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length217
Homology
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 3.040e-113
Identity = 175/217 (80.65%), Postives = 186/217 (85.71%), Query Frame = 0
Query:    1 SGVRGLQALVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEWT 217
            SG RGLQA+VDPGM+HGVDP WLHQV TGIAD        G  AAAV E++           +P++ LT  TE AITGLHDVL S+GVPSAYGISII FTLFVKG+TFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIK+W+
Sbjct:   56 SGARGLQAMVDPGMMHGVDPAWLHQVLTGIAD--------GDVAAAVAEEAAXXXX---XGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS 261          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.360e-78
Identity = 135/216 (62.50%), Postives = 159/216 (73.61%), Query Frame = 0
Query:    1 SGVRGLQALVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 216
            SGV GL+AL D G    +D   LHQVF+G+ADA+ A  D    AAA    + GG+F           L  ATE AIT LHD L+  GV  +YG +II FTLF+KGVTFPLTYQQL+STTKMQTL PKVK++Q R ANNPEAAN+A+  LY+ E VNPL+GCLP+LAQIPIFISLYR+LLNLAKENKL E FLW+PSLEGP F +PPTE ++WIK W
Sbjct:   51 SGVGGLRALADGG----IDFTVLHQVFSGLADATAATAD----AAADAAANNGGVFAG---------LVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTW 249          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.430e-59
Identity = 101/200 (50.50%), Postives = 136/200 (68.00%), Query Frame = 0
Query:   18 VDPVWLHQVFTGIA-DASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 216
            +DP+ L     G+A DA+D   +       V +  +GG         P+  L A T  AITGLHD+L+ LG+ + YG +II FTL +K VTFPL  +QL ST KMQ + PK++E+Q ++ANNPE ANQ + QLYQ  ++NPLAGCLP+LAQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ +   + + W+  W
Sbjct:   65 MDPLVLSHAVQGLAQDAADVASE-------VAKSDQGG--------GPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTW 249          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 191 bits (486), Expect = 9.520e-56
Identity = 106/221 (47.96%), Postives = 138/221 (62.44%), Query Frame = 0
Query:    4 RGLQALVDPGMVHGV-------DPVWLHQVFTGIADASDAVM-DGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 216
            R L+A+VDPG V  V         VWL Q   G+ADA+ A   D  GA     E +             +     A E AIT +H+ L+  G+ + YG+SII FT+ VK VT PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K+W
Sbjct:   79 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAXXXXXXXGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 299          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 192 bits (488), Expect = 2.420e-55
Identity = 106/221 (47.96%), Postives = 139/221 (62.90%), Query Frame = 0
Query:    4 RGLQALVDPGMVHGV-------DPVWLHQVFTGIADASDAVM-DGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 216
            R L+A+VDPG V  V         VWL Q   G+ADA+ A   D  GA     E +         +   +     A E AIT +H+ L+  G+ + YG+SII FT+ VK VT PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K+W
Sbjct:   41 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAADTAGAVEGSKEMTGAAXXXXXXNGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 261          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.390e-54
Identity = 105/221 (47.51%), Postives = 137/221 (61.99%), Query Frame = 0
Query:    4 RGLQALVDPGMVHGV-------DPVWLHQVFTGIADASDAVM-DGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKEW 216
            R L+A+VDPG V  V          WL Q   G+ADA+ A   D  GA     E +             +     A E AIT +H+ L+  G+ + YG+SII FT+ VK VT PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K+W
Sbjct:  141 RTLKAVVDPGHVAEVVHTHLPSSSAWLLQTLQGVADAAAATAPDAAGAVEGSKEMTSXXXXXXXXXXGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 361          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: L1IDX8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IDX8_GUITC)

HSP 1 Score: 171 bits (433), Expect = 9.420e-49
Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 0
Query:    6 LQALVDPG--------MVHGVDPVWLH-QVFTGIADASDAV--MDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFD-----SPPTEMMSWI-KEWT 217
            +QA++ PG        ++H  DP  L   V    A   DA+  +    AAAA   + K G+FG+ ++L           T +T LH   +S G+P A+G +I  FT+FVK VT+PL ++Q+SST  +Q L PKVK +Q+RYAN+P+  N+ + +LY+TENVNPLAGCLP L QIP+FI LYRS+L LA+++ L ESFLWIPSL+GP  +       P +  +W+ K WT
Sbjct:   54 VQAVMMPGTEAASFLSLLHLADPSHLPADVAASTAALQDAMQLLSDAAAAAAETTEDKPGVFGSFVNL---------IVTCLTALHTAFKSAGIPGAWGYAIATFTIFVKAVTYPLNFKQMSSTIALQQLQPKVKAIQSRYANDPQTQNEKIAELYRTENVNPLAGCLPTLIQIPVFIGLYRSVLQLAQKDLLEESFLWIPSLQGPVGEYNAKTGLPIDATAWLFKGWT 273          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A7S2H5X8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.120e-48
Identity = 101/215 (46.98%), Postives = 131/215 (60.93%), Query Frame = 0
Query:    9 LVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAA-----AVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPS-AYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KEW 216
            L+D     G D V    V TG AD++   +    +A+     A  + S  G FG         FLT   E  +  +H+ L S G+ + A+G+SII  TL +K  TFPLT  QL ST KMQ L P +KE QA+Y +NPE  NQ + ++YQT NVNPLAGC+P+L QIP+FI LYR++LNLAKEN L ESFLW+P+LEGPT+ + P     WI K W
Sbjct:   72 LLDAASTVGTD-VAQTVVTTGAADSAATAVGAAASASPEVMEAAADASNNGWFG---------FLTLPIEGLLNIIHNTLVSTGMDANAWGVSIIVMTLVIKAATFPLTKSQLESTNKMQALQPVIKEAQAKYQSNPEVMNQKIAEIYQTNNVNPLAGCVPSLVQIPVFIGLYRAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNW 276          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A7S0CAS3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAS3_9STRA)

HSP 1 Score: 171 bits (433), Expect = 8.020e-48
Identity = 82/150 (54.67%), Postives = 107/150 (71.33%), Query Frame = 0
Query:   67 FLTAATETAITGLHDVLQSLGVPS-AYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKE 215
            FL    E  I  +H+ L  +G+ S ++G SII     +KG+TFPLT  QL ST+KMQ L PK+KE+QA+YA+NPE  NQ V   Y+   VNPLAGCLP+LAQ+PIFI LYR++LNLAK+N L ESFLW+PSLEGPT+ + P   + W+ +
Sbjct:   93 FLAGPIEETICVIHNALNGIGLSSNSWGASIIILIFLIKGLTFPLTKAQLESTSKMQVLQPKIKEIQAKYASNPEVMNQKVSSFYKDNEVNPLAGCLPSLAQLPIFIGLYRAVLNLAKQNTLDESFLWLPSLEGPTYGADPAHGLDWVTQ 242          
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Match: A0A1Z5JPG7_FISSO (YidC/Oxa1 family membrane protein insertase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPG7_FISSO)

HSP 1 Score: 171 bits (433), Expect = 9.110e-48
Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 0
Query:   28 TGIADASDAVMDGGGAAAAVVEQSKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPS-AYGISIIFFTLFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KEWT 217
            T +ADA +   D    AA  V ++  G FG         FLT      +  +H  L ++GV + A+G+SII  TL +K VTFPLT  QL ST KMQ + P +KELQA+Y +NPE  NQ + + YQ+ ++NPLAGCLP+LAQIPIFI LYR++L+LA+ENKL E FLW+P+LEGPT+ + PT    W+ K WT
Sbjct:   61 TFLADAMEVTAD----AATEVAKTDNGWFG---------FLTGPIMFLLQLIHAGLVAVGVSANAWGVSIIAITLLIKAVTFPLTKTQLESTNKMQAMQPAIKELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWT 239          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8783.20410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC7_ECTSI3.040e-11380.65Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A835YLS0_9STRA2.360e-7862.50Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A7R9UFB5_9STRA6.430e-5950.50Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
W7U5Y4_9STRA9.520e-5647.96Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
K8YSD2_NANGC2.420e-5547.96Preprotein translocase subunit YidC n=2 Tax=Nannoc... [more]
A0A4D9D9H4_9STRA3.390e-5447.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
L1IDX8_GUITC9.420e-4944.10Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2H5X8_9STRA1.120e-4846.98Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0CAS3_9STRA8.020e-4854.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5JPG7_FISSO9.110e-4849.48YidC/Oxa1 family membrane protein insertase n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 92..201
e-value: 2.6E-36
score: 125.1
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 47..201
IPR028055Membrane insertase YidC/Oxa1, C-terminalTIGRFAMTIGR03592TIGR03592coord: 92..202
e-value: 1.5E-36
score: 124.2
NoneNo IPR availablePANTHERPTHR12428:SF14INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTICcoord: 47..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8783contigM-pyrifera_M_contig8783:331..5102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8783.20410.1mRNA_M-pyrifera_M_contig8783.20410.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8783 331..5102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8783.20410.1 ID=prot_M-pyrifera_M_contig8783.20410.1|Name=mRNA_M-pyrifera_M_contig8783.20410.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
SGVRGLQALVDPGMVHGVDPVWLHQVFTGIADASDAVMDGGGAAAAVVEQ
SKGGLFGTGLSLNPVEFLTAATETAITGLHDVLQSLGVPSAYGISIIFFT
LFVKGVTFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLY
QTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGP
TFDSPPTEMMSWIKEWT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18
IPR028055Membr_insert_YidC/Oxa1_C