mRNA_M-pyrifera_M_contig87817.20407.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A6B2L049_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L049_9EUKA) HSP 1 Score: 146 bits (369), Expect = 1.140e-37 Identity = 72/173 (41.62%), Postives = 105/173 (60.69%), Query Frame = 1 Query: 70 FVSFSNFRIAYGRIGIDLPTTL-NVTISNVDASLHSATGASIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNIQMREP 585 ++ F N +I Y R + + + N+ IS D S + S+ G+NN + N + G GC SI GGD SLTPG N + S YARLVR Y PG+R+ GVGN ++ +Y+ +APH G GG C F+ +LC+E+ DSGAFY GR+W++RG+++QD+ F N+ + P Sbjct: 287 YLQFQNLKIGYSRQAPIIASNVKNIVISGCDISNNGQFSISLSGTNNHLLNNKISGNGCGGLSISGGDQKSLTPGMNEASNNEISFYARLVRAYTPGIRWGGVGNVFKANYVHDAPHCGILGGGNNCLFEGNHLKDLCYETSDSGAFYTGRSWIQRGNLLQDNIFENVYNKVP 459
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A9UYI6_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UYI6_MONBE) HSP 1 Score: 113 bits (283), Expect = 5.240e-26 Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 1 Query: 1 HKARGEWRKLMPTLPTAS-TPTLAFVSFSNFRIAYGR-IGIDLPTTLNVTISNVDASLHSATGASIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTL--------CTFQRLSFDNLCFESDDSGAFYW----GRNWLERGSVVQDSSFSNIQMREP 585 H + ++ ++ TLP A TP + + +AY R GI LP + + + H G + G NN V N C S+ GG+ +SL P N V G + YA RTY GL ++GVGN+Y ++ + N PH G GG C F + +L FE+ D+GAFY G+ W+ RG+V+ + +F +++M EP Sbjct: 248 HPSNQDFSAVLSTLPHAIFTPNATALHLHDLTVAYARGSGIVLPDARGALLERLVVANHGGNGTQVHGVNNQVRNSDFFNLACMGLSVTGGNRTSLVPSNNVVDGNHIHDYALWKRTYQGGLFWAGVGNSYLNNVIENGPHNGILGGGNEADHLGGNNCIFVNNTLRHLAFETTDTGAFYSCGQDGQAWINRGNVIANCTFIDVRMHEP 456
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A7S3GKE4_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GKE4_9EUKA) HSP 1 Score: 109 bits (272), Expect = 3.030e-24 Identity = 61/182 (33.52%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 37 TLPTASTPTLAFVSFSNFRIAYGRIGIDLPTTLNVTISNVDASLHSATGASIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNIQMRE 582 T T S + +++F NF+ + L V + N+ + G S+ G ++ V+N V TGC ++ GGD LT TG ++R+ R Y PG+ FSGVG T + +S+ PH GG +L FQ +C+E DSGAFY GR+W RG++V + F +I E Sbjct: 324 TADTTSYLKMEYIAFENFQ----GTAVSLKNVNKVVLENLAVNAAGQVGISLSGYSSQVDNSIVSSTGCAGITLTGGDNVQLTASSLSATGNTLRYFSRVKRAYTPGIHFSGVGITLSSNKISDGPHNAILGGGSLNLFQYNYIARVCYEVTDSGAFYTGRSWANRGNIVHGNVFEDIYNTE 501
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A7S0NG32_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NG32_9CRYP) HSP 1 Score: 92.8 bits (229), Expect = 8.270e-20 Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 181 GASIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNIQ 573 G I GS+ V + + GC ++ GG+ +SLT N + + +AR+ R+Y PG+ + G G++ +DSY+ ++PH G G C F ++L FE+ D+GA+Y GR+W+ RG+++ + F I+ Sbjct: 1 GMDIDGSDVIVSSSNISSCGCGGIALNGGNTTSLTRSRNVIESADIHHFARIRRSYTPGVGWKGGGHSIRDSYIHHSPHAGILGLGNDCEFNGNVLESLAFEATDTGAWYSGRSWVNRGNIISRNRFVKIR 131
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: L1J0F5_GUITC (Beta_helix domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J0F5_GUITC) HSP 1 Score: 96.3 bits (238), Expect = 1.130e-19 Identity = 48/147 (32.65%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 133 LNVTISNVDASLHSATGASIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNIQ 573 +NV++SN+ TG + GS+ + + V GC ++ GG+ +SLT N + + +AR+ R+Y PG+ + G G++ + S++ +APH G G C F F++L FE+ D+GA+Y GR+W+ RG+++ + F I+ Sbjct: 429 INVSVSNI-----GKTGMDVDGSDILISSTNVSFCGCGGIALNGGNTTSLTRSNNEIELADIHNFARIRRSYTPGIGWRGGGHSIRQSHIHHAPHSGILGLGNDCEFDGNIFESLAFEATDTGAWYSGRSWINRGNIISRNRFVKIR 570
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A7S0FUP0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FUP0_9DINO) HSP 1 Score: 92.8 bits (229), Expect = 8.690e-19 Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 1 Query: 136 NVTISNVDASLHSATGASIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQ-----GATGGCTLCTFQRLSFDNLCFESDDSGAFYW----GRNWLERGSVVQDSSFSNIQ 573 +V + NV TG I G ++ V N V GC A++ GG+A+ L PG N+ +A L RTY G+ ++GV NTY+ + +S++PH G TG C F+ SF++ +E+ D+GAFY ++ RG+V++ SSF N++ Sbjct: 129 SVHLENVTVQYIGGTGIDIRGFDSGVSNSVVHDVGCRGAAVHGGNATLLQPGNNYADHNTIYHFALLKRTYQAGIDWAGVNNTYRHNRISDSPHNCMLGGGNTGDGVNCLFEYNSFEDCAYEAADAGAFYTCGQQATAFVNRGNVLRHSSFRNMR 283
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A7S4CIP4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CIP4_9EUGL) HSP 1 Score: 78.6 bits (192), Expect = 1.780e-15 Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 331 RLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNIQMREP 585 R RTY PG+ FSGVGN Y ++ L ++PHQG TG F +F+ LC E+ D+ A+Y GR++ +RGSV++ + F +I+ P Sbjct: 9 RWKRTYQPGIYFSGVGNAYLNNVLHDSPHQGMTGYGNDHRFIGNTFERLCHETSDASAWYQGRSFAQRGSVLRGNVFRDIRRLAP 93
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A1G1C075_9BACT (Uncharacterized protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1C075_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 3.020e-15 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 256 IGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGATGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNI 570 + GGD +LTP F + +ARL R YNPG+ GVGN + + NAPH G + ++C+ES+D+GA Y GRNW RG V++++ F +I Sbjct: 396 LSGGDRKTLTPAGLFAENNHVHHFARLNRVYNPGITLHGVGNRASHNLIDNAPHMAMGFGGNDHVIEFNEIHSVCYESNDAGAIYTGRNWTMRGHVIRNNYFHHI 500
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A1M6J9F1_9BACT (Right handed beta helix region n=1 Tax=Tangfeifania diversioriginum TaxID=1168035 RepID=A0A1M6J9F1_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 7.160e-15 Identity = 48/143 (33.57%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 151 NVDASLHSATGA-SIIGSNNTVENLTVVGTGCEAASIGGGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGA--TGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNI 570 N+D + A + S+ G N + N +V TG + GGD +L P NFV + R+ +TY G++ SGVGN ++ + N+PH +G L + + ++C E+DD GA Y+GRN ERG +VQ + F ++ Sbjct: 350 NIDDKIADANESNSVAGKKNGLANCSVYQTGMGGIKLCGGDRQTLEPAENFVRNCTIHDFNRIAKTYCAGIKISGVGNRISNNEIFNSPHVAILLSGNDHLIEYNEIH--DVCRETDDVGALYYGRNPSERGHIVQFNYFHHL 490
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Match: A0A444LED1_9HYPH (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Rhizobium sp. 24NR TaxID=2503024 RepID=A0A444LED1_9HYPH) HSP 1 Score: 78.2 bits (191), Expect = 1.990e-13 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 262 GGDASSLTPGYNFVTGLNASGYARLVRTYNPGLRFSGVGNTYQDSYLSNAPHQGA--TGGCTLCTFQRLSFDNLCFESDDSGAFYWGRNWLERGSVVQDSSFSNIQM 576 GGD SLTPG + S Y + RTY P + GVGN +++ +SN PH G + + +S ++ E+DD+GA Y GR+W ERG++++ + FSNI M Sbjct: 290 GGDRISLTPGNIVIANSKISRYGQDSRTYRPAVLIRGVGNRIENNEISNGPHSAIILNGNDHVISGNHIS--DVVKEADDAGAIYVGRDWTERGNIIESNLFSNIGM 394 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87817.20407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87817.20407.1 >prot_M-pyrifera_M_contig87817.20407.1 ID=prot_M-pyrifera_M_contig87817.20407.1|Name=mRNA_M-pyrifera_M_contig87817.20407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp MPTLPTASTPTLAFVSFSNFRIAYGRIGIDLPTTLNVTISNVDASLHSATback to top mRNA from alignment at M-pyrifera_M_contig87817:8..592- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87817.20407.1 ID=mRNA_M-pyrifera_M_contig87817.20407.1|Name=mRNA_M-pyrifera_M_contig87817.20407.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig87817:8..592- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87817:8..592- >mRNA_M-pyrifera_M_contig87817.20407.1 ID=mRNA_M-pyrifera_M_contig87817.20407.1|Name=mRNA_M-pyrifera_M_contig87817.20407.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig87817:8..592- (Macrocystis pyrifera P11B4 male)back to top |