mRNA_M-pyrifera_M_contig87805.20398.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Match: A0A5A8C152_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C152_CAFRO) HSP 1 Score: 132 bits (332), Expect = 5.960e-32 Identity = 86/233 (36.91%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 1 EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVEATYTGNVLQLETVKEPAEDFYFIRAFAAGREQFAVKGTGELVVGAFTVETIVVSNGQTITGGGLQVDTVGIXXXXXXXXXXDDGALLEQQKDAAGVVVRSIVRNNGAEAFTNTLLKLDIVASTIDSFDATSE---------------------TSLFDIRGDGLVTSRAGGVVVKESGVTIE 636 EH+ CS RGLC D G+C+C+ G+ G C + +TE N++P +L + +TYTGNVLQL+T K A DFYF++A AAG FAV+G G+ + F T V+ G TIT XXXXXXXXXX + + + V S+V +N + +T+TL++L + D F ++ T LF + G+G GGV V ESG+T+E Sbjct: 648 EHVMCSRRGLCDFDEGRCTCYSGFTGVACSQPSAATEVTNNEPALLAAATSSTYTGNVLQLQTTKRAAPDFYFLKALAAGATVFAVRGDGQAQIDKFQTGTATVTGGLTITQXXXXXXXXXXXXXXXXXXXXXXXIASTRTTNNVNLNVESVVTDNAEDGYTSTLVRLAVTQGPSDLFTLNNKNHYVMQVFDNTVQSTGGAYVNTLLFSMLGNGYTMFHKGGVHVSESGLTVE 880
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Match: A0A5A8C8W7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C8W7_CAFRO) HSP 1 Score: 132 bits (332), Expect = 6.270e-32 Identity = 86/233 (36.91%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 1 EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVEATYTGNVLQLETVKEPAEDFYFIRAFAAGREQFAVKGTGELVVGAFTVETIVVSNGQTITGGGLQVDTVGIXXXXXXXXXXDDGALLEQQKDAAGVVVRSIVRNNGAEAFTNTLLKLDIVASTIDSFDATSE---------------------TSLFDIRGDGLVTSRAGGVVVKESGVTIE 636 EH+ CS RGLC D G+C+C+ G+ G C + +TE N++P +L + +TYTGNVLQL+T K A DFYF++A AAG FAV+G G+ + F T V+ G TIT XXXXXXXXXX + + + V S+V +N + +T+TL++L + D F ++ T LF + G+G GGV V ESG+T+E Sbjct: 648 EHVMCSRRGLCDFDEGRCTCYSGFTGVACSQPSAATEVTNNEPALLAAATSSTYTGNVLQLQTTKRAAPDFYFLKALAAGATVFAVRGDGQAQIDKFQTGTATVTGGLTITQXXXXXXXXXXXXXXXXXXXXXXXIASTRTTNNVNLNVESVVTDNAEDGYTSTLVRLAVTQGPSDLFTLNNKNHYVMQVFDNTVQSTGGAYVNTLLFSMLGNGYTMFHKGGVHVSESGLTVE 880
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Match: A0A7S0JNH0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JNH0_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 3.730e-13 Identity = 61/223 (27.35%), Postives = 100/223 (44.84%), Query Frame = 1 Query: 1 EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVEATYTGNVLQLETVKEPAEDFYFIRAFAAGREQFAVKGTGEL------VVGAFTVETIVVSNGQTITGGGLQVDTVGIXXXXXXXXXXDDGALLEQQKDAAGVVVRSIVRNNGAEAFTNTLLKLDIVASTIDSFDATS-----ETSLFDIRGDGLVTSRAGGVVVKESGVTIE 636 EH+ CS G+C+ G C+CF G C + + D+P + V +Y GN +ET+++ + DF F A A F V GTG + + T + + V+NG TIT GGL+++ G DD LE + + ++V N+ A+ ++ L L + +F S + +F I G+G +T VV E G+ ++ Sbjct: 466 EHIACSGNGVCN--QGVCTCFGLSTGGACQVVPSAELFGADEPYLNVFIANPSYKGNAFVVETLRDESPDFNFFMAIANQNTLFRVDGTGMVWSDSASIQRRTTTKFLTVTNGATITSGGLRIEAAGQTIVSGGLSVKDDSTQLETMQPLSP----ALVVNSTADYRSSALAILSVAERPNTTFSFLSVLTRHQDEIFSIAGNGRLTLSGPDVVNNEGGLDVQ 682
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Match: A0A5A8D2H2_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D2H2_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 3.970e-13 Identity = 61/223 (27.35%), Postives = 100/223 (44.84%), Query Frame = 1 Query: 1 EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVEATYTGNVLQLETVKEPAEDFYFIRAFAAGREQFAVKGTGEL------VVGAFTVETIVVSNGQTITGGGLQVDTVGIXXXXXXXXXXDDGALLEQQKDAAGVVVRSIVRNNGAEAFTNTLLKLDIVASTIDSFDATS-----ETSLFDIRGDGLVTSRAGGVVVKESGVTIE 636 EH+ CS G+C+ G C+CF G C + + D+P + V +Y GN +ET+++ + DF F A A F V GTG + + T + + V+NG TIT GGL+++ G DD LE + + ++V N+ A+ ++ L L + +F S + +F I G+G +T VV E G+ ++ Sbjct: 435 EHIACSGNGVCN--QGVCTCFGLSTGGACQVVPSAELFGADEPYLNVFIANPSYKGNAFVVETLRDESPDFNFFMAIANQNTLFRVDGTGMVWSDSASIQRRTTTKFLTVTNGATITSGGLRIEAAGQTIVSGGLSVKDDSTQLETMQPLSP----ALVVNSTADFRSSALAILSVAERPNTTFSFLSVLTRHQDEIFSIAGNGRLTLSGPDVVNNEGGLDVQ 651
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Match: A0A5A8CI37_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CI37_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 3.990e-13 Identity = 61/223 (27.35%), Postives = 100/223 (44.84%), Query Frame = 1 Query: 1 EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVEATYTGNVLQLETVKEPAEDFYFIRAFAAGREQFAVKGTGEL------VVGAFTVETIVVSNGQTITGGGLQVDTVGIXXXXXXXXXXDDGALLEQQKDAAGVVVRSIVRNNGAEAFTNTLLKLDIVASTIDSFDATS-----ETSLFDIRGDGLVTSRAGGVVVKESGVTIE 636 EH+ CS G+C+ G C+CF G C + + D+P + V +Y GN +ET+++ + DF F A A F V GTG + + T + + V+NG TIT GGL+++ G DD LE + + ++V N+ A+ ++ L L + +F S + +F I G+G +T VV E G+ ++ Sbjct: 435 EHIACSGNGVCN--QGVCTCFGLSTGGACQVVPSAELFGADEPYLNVFIANPSYKGNAFVVETLRDESPDFNFFMAIANQNTLFRVDGTGMVWSDSASIQRRTTTKFLTVTNGATITSGGLRIEAAGQTIASGGLSVKDDSTQLETMQPLSP----ALVVNSTADFRSSALAILSVAERPNTTFSFLSVLTRHQDEIFSIAGNGRLTLSGPDVVNNEGGLDVQ 651
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Match: A0A5A8C251_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C251_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 4.060e-13 Identity = 61/223 (27.35%), Postives = 100/223 (44.84%), Query Frame = 1 Query: 1 EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVEATYTGNVLQLETVKEPAEDFYFIRAFAAGREQFAVKGTGEL------VVGAFTVETIVVSNGQTITGGGLQVDTVGIXXXXXXXXXXDDGALLEQQKDAAGVVVRSIVRNNGAEAFTNTLLKLDIVASTIDSFDATS-----ETSLFDIRGDGLVTSRAGGVVVKESGVTIE 636 EH+ CS G+C+ G C+CF G C + + D+P + V +Y GN +ET+++ + DF F A A F V GTG + + T + + V+NG TIT GGL+++ G DD LE + + ++V N+ A+ ++ L L + +F S + +F I G+G +T VV E G+ ++ Sbjct: 435 EHIACSGNGVCN--QGVCTCFGLSTGGACQVVPSAELFGADEPYLNVFIANPSYKGNAFVVETLRDESPDFNFFMAIANQNTLFRVDGTGMVWSDSASIQRRTTTKFLTVTNGATITSGGLRIEAAGQTIASGGLSVKDDSTQLETMQPLSP----ALVVNSTADFRSSALAILSVAERPNTTFSFLSVLTRHQDEIFSIAGNGRLTLSGPDVVNNEGGLDVQ 651 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87805.20398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87805.20398.1 >prot_M-pyrifera_M_contig87805.20398.1 ID=prot_M-pyrifera_M_contig87805.20398.1|Name=mRNA_M-pyrifera_M_contig87805.20398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp EHLPCSNRGLCSLDSGQCSCFPGYDGTDCGLSTVSTETDNDDPGILVNSVback to top mRNA from alignment at M-pyrifera_M_contig87805:71..775+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87805.20398.1 ID=mRNA_M-pyrifera_M_contig87805.20398.1|Name=mRNA_M-pyrifera_M_contig87805.20398.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig87805:71..775+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87805:71..775+ >mRNA_M-pyrifera_M_contig87805.20398.1 ID=mRNA_M-pyrifera_M_contig87805.20398.1|Name=mRNA_M-pyrifera_M_contig87805.20398.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig87805:71..775+ (Macrocystis pyrifera P11B4 male)back to top |