mRNA_M-pyrifera_M_contig87711.20376.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: D8LJI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI7_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.110e-36 Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEE 225 N +PWEFALIGSAAF+AGVTRAVSTAVIVFELSG+NHLRLPLGVALMISYFIANRFTKGVYDAL DTN TPHLEE Sbjct: 107 NFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEE 181
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A6H5K923_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K923_9PHAE) HSP 1 Score: 137 bits (346), Expect = 4.250e-36 Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 +PWEFALIGSAAF+AGVTRAVSTAVIVFELSG+NHLRLPLGVALMISYFIANRFTKG+YDAL DTN TPHLEEV Sbjct: 253 KFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNKTPHLEEV 328
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: W7UA92_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA92_9STRA) HSP 1 Score: 123 bits (308), Expect = 5.840e-31 Identity = 58/76 (76.32%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 +L+PWEFA+IG+AAF++GVTRAVSTAVIVFELSGQNHLRLP+ VAL+++YF+ANRFTK VYD L DTNGTP L E+ Sbjct: 557 SLEPWEFAVIGAAAFSSGVTRAVSTAVIVFELSGQNHLRLPISVALLLAYFVANRFTKNVYDELLDTNGTPSLPEL 632
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A7S2DMH5_9STRA (Chloride channel protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMH5_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.550e-27 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 1 Query: 4 LKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHL 219 L+PWEFA++GSAAF+AGVTR VSTAVI+FEL G+ HLRLPL VA++++YFIANRF K +YDAL DTNGTP L Sbjct: 100 LEPWEFAVVGSAAFSAGVTRVVSTAVILFELVGEPHLRLPLSVAILVAYFIANRFCKNIYDALIDTNGTPTL 171
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A7S0SPL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SPL1_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.940e-27 Identity = 47/76 (61.84%), Postives = 64/76 (84.21%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 ++ PWEFA++G+AA+A GVTRA+STAVIVFELSG HLRLP+ +A++ SYF+ NR +K +YD L+DTNGTP L ++ Sbjct: 110 SIPPWEFAVVGAAAYATGVTRAISTAVIVFELSGLRHLRLPISLAVLASYFVGNRLSKNIYDVLSDTNGTPFLPDL 185
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A7S3NNS7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNS7_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.780e-24 Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 PWE+A+IG+AAFAAGVTRA+STAVI EL+G+NHLR+PL ++ ++++FI NRFTK +YDAL DTNGTP L ++ Sbjct: 486 QFMPWEYAVIGAAAFAAGVTRALSTAVIFLELAGENHLRIPLLLSTLVAHFIGNRFTKPIYDALIDTNGTPTLPDL 561
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A835YU91_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU91_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.910e-23 Identity = 46/73 (63.01%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHL 219 +PWEFA+IG+AA + +TRAVSTA+IVFE+SG+N LRLPLG+A++I++ IA+RFTKG YD+L DTN P+L Sbjct: 442 TFQPWEFAVIGAAALSGSITRAVSTAIIVFEMSGENCLRLPLGLAVLIAHTIASRFTKGAYDSLVDTNSAPYL 514
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A7S3GUC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUC0_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.770e-21 Identity = 41/73 (56.16%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 10 PWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 PWE+AL+G+AAF+ GVTRA+STAVI+FEL+ Q HL LP+ V ++ ++F+ NRFTK VYD L + NG P+++++ Sbjct: 83 PWEYALLGAAAFSTGVTRAISTAVIIFELACQPHLGLPISVVVLTAHFVGNRFTKNVYDVLMEANGGPYMDDL 155
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A3R7JU70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JU70_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.390e-17 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 N KP+EFA+IG+ AF++GVT AVSTAVI+ E+S + L LP+ VA++ +YF A RFT+ VYD L T+ P L+++ Sbjct: 125 NYKPFEFAIIGAGAFSSGVTHAVSTAVIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSNLPRLKKL 200
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Match: A0A3F2RSG3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSG3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.770e-17 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 1 NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYFIANRFTKGVYDALTDTNGTPHLEEV 228 N KP+EFA+IG+ AF++GVT AVSTAVI+ E+S + L LP+ VA++ +YF A RFT+ VYD L T+ P L+++ Sbjct: 234 NYKPFEFAIIGAGAFSSGVTHAVSTAVIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSNLPRLKKL 309 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87711.20376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87711.20376.1 >prot_M-pyrifera_M_contig87711.20376.1 ID=prot_M-pyrifera_M_contig87711.20376.1|Name=mRNA_M-pyrifera_M_contig87711.20376.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp NLKPWEFALIGSAAFAAGVTRAVSTAVIVFELSGQNHLRLPLGVALMISYback to top mRNA from alignment at M-pyrifera_M_contig87711:412..639- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87711.20376.1 ID=mRNA_M-pyrifera_M_contig87711.20376.1|Name=mRNA_M-pyrifera_M_contig87711.20376.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=228bp|location=Sequence derived from alignment at M-pyrifera_M_contig87711:412..639- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87711:412..639- >mRNA_M-pyrifera_M_contig87711.20376.1 ID=mRNA_M-pyrifera_M_contig87711.20376.1|Name=mRNA_M-pyrifera_M_contig87711.20376.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig87711:412..639- (Macrocystis pyrifera P11B4 male)back to top |