mRNA_M-pyrifera_M_contig86962.20218.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A2E7KMK0_9PLAN (Flagella basal body P-ring formation protein FlgA n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KMK0_9PLAN) HSP 1 Score: 472 bits (1214), Expect = 2.880e-165 Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK 732 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRV+CQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQM QSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK Sbjct: 136 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVICQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMSQSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK 379
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517Q1X1_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q1X1_9PLAN) HSP 1 Score: 401 bits (1031), Expect = 1.910e-137 Identity = 201/244 (82.38%), Postives = 219/244 (89.75%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK 732 Q+ALQ WI R P A HFT VR+QP DV ++R+ RADGFYFSQLDL RQT QPV LQLKDAQGMVRQ + CQ++RVPEILAAKYTLNRGTVVRADDLVWMRPEK+QKGI+DPRQVIGRELTRTVYQ QPMR+EDLIEVPLVRDGAIVTVYARRGGI+VRREMRARGDG+MGD+ITLIALEGRDRL A VTGYNQ EVNYRP+SQ+ +STGIQFISG+T SAGPSR GQVQTVYEIQRGGR K Sbjct: 136 QRALQAWIRRAVPDAGHFTAIVRMQPEDVALIRDHRADGFYFSQLDLQRQTRQPVTLQLKDAQGMVRQANLTCQLKRVPEILAAKYTLNRGTVVRADDLVWMRPEKEQKGITDPRQVIGRELTRTVYQAQPMRSEDLIEVPLVRDGAIVTVYARRGGITVRREMRARGDGAMGDEITLIALEGRDRLAAIVTGYNQAEVNYRPASQLQRSTGIQFISGSTSSAGPSRTGQVQTVYEIQRGGRQK 379
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A518I7C7_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I7C7_9PLAN) HSP 1 Score: 308 bits (789), Expect = 4.830e-101 Identity = 162/244 (66.39%), Postives = 192/244 (78.69%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSR--GGQVQTVYE-IQRGG 723 Q AL WI R P AS FT+++R+QP D PV+ RAD F F L+ +TEQ V L D QG VRQVRV C+IQ VPEILAAKY+LN+GTV+RADDLVW+RPEK+Q+GI+DPR VIGRELTRTV+Q+ MR++DL+EVPLVRD AIVTVYARRGGISV+REMRARG G MGD ITLIALEGRDRL AT+TGYNQ EVNYRP+S++ +S GIQFISGT E +G + GG +T I+RGG Sbjct: 112 QLALSGWIKRYYPDASAFTLTIRVQPVDAPVILSNRADTFRFPDLNRFAETEQVVSLNFLDTQGTVRQVRVFCRIQNVPEILAAKYSLNKGTVIRADDLVWVRPEKNQEGITDPRLVIGRELTRTVHQSNVMRSQDLMEVPLVRDNAIVTVYARRGGISVKREMRARGTGGMGDSITLIALEGRDRLAATITGYNQAEVNYRPASEIQRSAGIQFISGTAEPSGSIQRTGGLRKTTRPVIRRGG 355
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A2D5GSM4_9PLAN (Flagella basal body P-ring formation protein FlgA n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A2D5GSM4_9PLAN) HSP 1 Score: 306 bits (785), Expect = 4.320e-100 Identity = 159/244 (65.16%), Postives = 196/244 (80.33%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTE-SAGPSRGGQVQTV--YEIQRGG 723 QQAL +WI + P + F++ VRL V V + RAD F F+ LD +TEQ + ++L DAQG ++R++CQ++R+PEILAAKYTLN+GTVVRADDLVWMRPEKDQ GI+DPR VIGRELTRTVYQ+ MR++DLIEVPL+RDGAIVTVYARRGGISVRREMRA+G G MGD ITLIALEGRDRL ATVTGYNQ EVNYRP++++ Q+ GIQFISG+++ SAG ++ G +Q Y I+RGG Sbjct: 137 QQALTDWIRSSYPNSKQFSLKVRLPRDHVQQVLDNRADLFRFAGLDQLLETEQAIGMKLLDAQGQSHELRIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKDQTGITDPRLVIGRELTRTVYQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAEVNYRPANEVQQTAGIQFISGSSDASAGNTQSGTIQNAGGYAIRRGG 380
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517VDC4_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VDC4_9PLAN) HSP 1 Score: 303 bits (775), Expect = 9.620e-99 Identity = 158/244 (64.75%), Postives = 194/244 (79.51%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESA-GPSRGGQVQTV--YEIQRGG 723 QQA+ +WI + P + F+++VRL +V V + RAD F F+ LD +TEQ V ++L DAQG V ++R++CQ++R+PEILAAKYTLN+GTVVRADDLVWMRPEK Q GI+DPR VIGRELTRTVYQ+ MR++DLIEVPL+RDGAIVTVYARRGGISVRREMRA+G G MGD ITLIALEGRDRL ATVTGYNQ EVNYRP++++ GIQFISG++E+A G G +Q Y I+RGG Sbjct: 125 QQAMTDWIRSSYPDSKQFSLTVRLPRDNVRQVLDNRADMFRFAGLDQLLETEQAVGMKLLDAQGQVHEMRIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKSQTGITDPRLVIGRELTRTVYQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAEVNYRPTNEVQPQNGIQFISGSSEAAVGNVPSGNIQNAGGYAIRRGG 368
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517RAH1_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RAH1_9PLAN) HSP 1 Score: 301 bits (770), Expect = 7.760e-98 Identity = 155/224 (69.20%), Postives = 181/224 (80.80%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAG 672 QQAL WI P AS FTV+VR+QPAD ++ RAD F F L+ TEQ V + L DAQG R VR+ C+IQ VPEILAAKY+LN+GTV+RADDL+W+RPEK+Q GI+DPR VIGRELTRTV+Q+ MR++DL+EVPL+RDGAIVTVYARRGGISV+REMRARG G MGD ITLIALEGRDRLTATVTGYNQ EVNYRP+S++ +S GIQFISGT E G Sbjct: 136 QQALSEWIKVYYPDASAFTVTVRVQPADASLILANRADSFRFPGLNRFADTEQIVGMNLIDAQGTARLVRLFCRIQNVPEILAAKYSLNKGTVIRADDLMWVRPEKNQTGITDPRLVIGRELTRTVHQSNVMRSQDLMEVPLIRDGAIVTVYARRGGISVKREMRARGTGGMGDSITLIALEGRDRLTATVTGYNQAEVNYRPASEVQRSAGIQFISGTAEPTG 359
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A350K2X5_9PLAN (Flagella basal body P-ring formation protein FlgA (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K2X5_9PLAN) HSP 1 Score: 276 bits (706), Expect = 1.050e-90 Identity = 139/195 (71.28%), Postives = 169/195 (86.67%), Query Frame = 1 Query: 148 QTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTE-SAGPSRGGQVQTV--YEIQRGG 723 +TEQ + ++L DAQG ++R++CQ++R+PEILAAKYTLN+GTVVRADDLVWMRPEKDQ GI+DPR VIGRELTRTVYQ+ MR++DLIEVPL+RDGAIVTVYARRGGISVRREMRA+G G MGD ITLIALEGRDRL ATVTGYNQ EVNYRP++++ Q+ GIQFISG+++ SAG ++ G +Q Y I+RGG Sbjct: 5 ETEQAIGMKLLDAQGQSHELRIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKDQTGITDPRLVIGRELTRTVYQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAEVNYRPANEIQQTAGIQFISGSSDASAGNTQSGTIQNAGGYAIRRGG 199
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517WUI5_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUI5_9PLAN) HSP 1 Score: 271 bits (692), Expect = 4.670e-86 Identity = 135/230 (58.70%), Postives = 182/230 (79.13%), Query Frame = 1 Query: 1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGP-SRGG 687 Q+ L +W+ + A+ F+V++R+ DV ++R + + FS++D EQ + L L D++G VRQ RV CQ+Q +PEILAAKYTLN+GTV+RADDL+W++PEK+Q GI+DP+ VI RELTRTV+Q+ +R++DLIEVPL+RDGAIVTV ARRGGI+V+REMRARG+G +GD ITLIALEGRDRLTATV+GYNQ EVNYRP++++ + + +QFISG T S G +RGG Sbjct: 136 QRVLADWLKKIFRDANRFSVTIRIPHDDVQMIRTSNPASYRFSKIDRILGIEQELTLDLIDSKGAVRQTRVFCQLQNIPEILAAKYTLNKGTVIRADDLIWVKPEKNQTGITDPQLVISRELTRTVHQSHAIRSQDLIEVPLIRDGAIVTVSARRGGITVKREMRARGNGGLGDPITLIALEGRDRLTATVSGYNQAEVNYRPANEIQRDSRVQFISGATGSRGSINRGG 365
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517W2F8_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W2F8_9PLAN) HSP 1 Score: 269 bits (687), Expect = 2.650e-85 Identity = 131/230 (56.96%), Postives = 182/230 (79.13%), Query Frame = 1 Query: 7 ALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSRGGQVQ 696 AL +W+ +T A+ +++ +R+ DV ++R + + FS++D TEQ + L L D++G VRQ RV CQ+Q +PEILAAKYTL++GTV+RADDLVW++P+K+QKGI+DP+ VI RELTRTV+Q+ +R++DL+EVPL+RDGAIVTV ARRGGI+V+REMRARG+G +GD ITLIALEGRDRLTATV+GYNQ EVNYRP++++ + + +QFISG S G + +V+ Sbjct: 138 ALSDWLKKTFRDANSYSIMIRVPHDDVQMIRASNPASYRFSKIDRILGTEQELTLDLIDSKGAVRQTRVFCQLQNIPEILAAKYTLSKGTVIRADDLVWVKPQKNQKGITDPQLVISRELTRTVHQSHAIRSQDLMEVPLIRDGAIVTVSARRGGITVKREMRARGNGGLGDPITLIALEGRDRLTATVSGYNQAEVNYRPANEIQRDSRVQFISGAIGSRGSTNRARVR 367
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A3B1DSJ0_9ZZZZ (SAF domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DSJ0_9ZZZZ) HSP 1 Score: 115 bits (289), Expect = 5.450e-26 Identity = 65/197 (32.99%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 7 ALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEV 597 A+Q ++ S V + L+ D +V + G+ + Q + + +D + V QVR V + P++LA ++ L RG +++ DLV + E + +++G E TR + Q QP+ +D+ VPLVR IVTV + GGI VRR+M++RG GS G+ ITL++L+GR + A VT +++ EV Sbjct: 144 AMQQYLRGKGVLLSSLKVEIHLEAKDASLVLSGKLSGYKIEGGTTPWEKRQQFVAKFQDLREDVHQVRFVAWVVPKPQVLATRFALPRGHIIKPADLVMKQIEDENAPKVRYEEIVGTETTRPIRQNQPITLQDVRSVPLVRSNDIVTVTSNVGGILVRRQMKSRGMGSRGETITLVSLDGRQSIQARVTAFHEAEV 340 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86962.20218.1 >prot_M-pyrifera_M_contig86962.20218.1 ID=prot_M-pyrifera_M_contig86962.20218.1|Name=mRNA_M-pyrifera_M_contig86962.20218.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp MVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPback to top mRNA from alignment at M-pyrifera_M_contig86962:1..839- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86962.20218.1 ID=mRNA_M-pyrifera_M_contig86962.20218.1|Name=mRNA_M-pyrifera_M_contig86962.20218.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=839bp|location=Sequence derived from alignment at M-pyrifera_M_contig86962:1..839- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86962:1..839- >mRNA_M-pyrifera_M_contig86962.20218.1 ID=mRNA_M-pyrifera_M_contig86962.20218.1|Name=mRNA_M-pyrifera_M_contig86962.20218.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig86962:1..839- (Macrocystis pyrifera P11B4 male)back to top |