mRNA_M-pyrifera_M_contig86962.20218.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86962.20218.1
Unique NamemRNA_M-pyrifera_M_contig86962.20218.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A2E7KMK0_9PLAN (Flagella basal body P-ring formation protein FlgA n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KMK0_9PLAN)

HSP 1 Score: 472 bits (1214), Expect = 2.880e-165
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK 732
            QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRV+CQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQM QSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK
Sbjct:  136 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVICQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMSQSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK 379          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517Q1X1_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q1X1_9PLAN)

HSP 1 Score: 401 bits (1031), Expect = 1.910e-137
Identity = 201/244 (82.38%), Postives = 219/244 (89.75%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSRGGQVQTVYEIQRGGRSK 732
            Q+ALQ WI R  P A HFT  VR+QP DV ++R+ RADGFYFSQLDL RQT QPV LQLKDAQGMVRQ  + CQ++RVPEILAAKYTLNRGTVVRADDLVWMRPEK+QKGI+DPRQVIGRELTRTVYQ QPMR+EDLIEVPLVRDGAIVTVYARRGGI+VRREMRARGDG+MGD+ITLIALEGRDRL A VTGYNQ EVNYRP+SQ+ +STGIQFISG+T SAGPSR GQVQTVYEIQRGGR K
Sbjct:  136 QRALQAWIRRAVPDAGHFTAIVRMQPEDVALIRDHRADGFYFSQLDLQRQTRQPVTLQLKDAQGMVRQANLTCQLKRVPEILAAKYTLNRGTVVRADDLVWMRPEKEQKGITDPRQVIGRELTRTVYQAQPMRSEDLIEVPLVRDGAIVTVYARRGGITVRREMRARGDGAMGDEITLIALEGRDRLAAIVTGYNQAEVNYRPASQLQRSTGIQFISGSTSSAGPSRTGQVQTVYEIQRGGRQK 379          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A518I7C7_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I7C7_9PLAN)

HSP 1 Score: 308 bits (789), Expect = 4.830e-101
Identity = 162/244 (66.39%), Postives = 192/244 (78.69%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSR--GGQVQTVYE-IQRGG 723
            Q AL  WI R  P AS FT+++R+QP D PV+   RAD F F  L+   +TEQ V L   D QG VRQVRV C+IQ VPEILAAKY+LN+GTV+RADDLVW+RPEK+Q+GI+DPR VIGRELTRTV+Q+  MR++DL+EVPLVRD AIVTVYARRGGISV+REMRARG G MGD ITLIALEGRDRL AT+TGYNQ EVNYRP+S++ +S GIQFISGT E +G  +  GG  +T    I+RGG
Sbjct:  112 QLALSGWIKRYYPDASAFTLTIRVQPVDAPVILSNRADTFRFPDLNRFAETEQVVSLNFLDTQGTVRQVRVFCRIQNVPEILAAKYSLNKGTVIRADDLVWVRPEKNQEGITDPRLVIGRELTRTVHQSNVMRSQDLMEVPLVRDNAIVTVYARRGGISVKREMRARGTGGMGDSITLIALEGRDRLAATITGYNQAEVNYRPASEIQRSAGIQFISGTAEPSGSIQRTGGLRKTTRPVIRRGG 355          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A2D5GSM4_9PLAN (Flagella basal body P-ring formation protein FlgA n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A2D5GSM4_9PLAN)

HSP 1 Score: 306 bits (785), Expect = 4.320e-100
Identity = 159/244 (65.16%), Postives = 196/244 (80.33%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTE-SAGPSRGGQVQTV--YEIQRGG 723
            QQAL +WI  + P +  F++ VRL    V  V + RAD F F+ LD   +TEQ + ++L DAQG   ++R++CQ++R+PEILAAKYTLN+GTVVRADDLVWMRPEKDQ GI+DPR VIGRELTRTVYQ+  MR++DLIEVPL+RDGAIVTVYARRGGISVRREMRA+G G MGD ITLIALEGRDRL ATVTGYNQ EVNYRP++++ Q+ GIQFISG+++ SAG ++ G +Q    Y I+RGG
Sbjct:  137 QQALTDWIRSSYPNSKQFSLKVRLPRDHVQQVLDNRADLFRFAGLDQLLETEQAIGMKLLDAQGQSHELRIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKDQTGITDPRLVIGRELTRTVYQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAEVNYRPANEVQQTAGIQFISGSSDASAGNTQSGTIQNAGGYAIRRGG 380          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517VDC4_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VDC4_9PLAN)

HSP 1 Score: 303 bits (775), Expect = 9.620e-99
Identity = 158/244 (64.75%), Postives = 194/244 (79.51%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESA-GPSRGGQVQTV--YEIQRGG 723
            QQA+ +WI  + P +  F+++VRL   +V  V + RAD F F+ LD   +TEQ V ++L DAQG V ++R++CQ++R+PEILAAKYTLN+GTVVRADDLVWMRPEK Q GI+DPR VIGRELTRTVYQ+  MR++DLIEVPL+RDGAIVTVYARRGGISVRREMRA+G G MGD ITLIALEGRDRL ATVTGYNQ EVNYRP++++    GIQFISG++E+A G    G +Q    Y I+RGG
Sbjct:  125 QQAMTDWIRSSYPDSKQFSLTVRLPRDNVRQVLDNRADMFRFAGLDQLLETEQAVGMKLLDAQGQVHEMRIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKSQTGITDPRLVIGRELTRTVYQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAEVNYRPTNEVQPQNGIQFISGSSEAAVGNVPSGNIQNAGGYAIRRGG 368          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517RAH1_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RAH1_9PLAN)

HSP 1 Score: 301 bits (770), Expect = 7.760e-98
Identity = 155/224 (69.20%), Postives = 181/224 (80.80%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAG 672
            QQAL  WI    P AS FTV+VR+QPAD  ++   RAD F F  L+    TEQ V + L DAQG  R VR+ C+IQ VPEILAAKY+LN+GTV+RADDL+W+RPEK+Q GI+DPR VIGRELTRTV+Q+  MR++DL+EVPL+RDGAIVTVYARRGGISV+REMRARG G MGD ITLIALEGRDRLTATVTGYNQ EVNYRP+S++ +S GIQFISGT E  G
Sbjct:  136 QQALSEWIKVYYPDASAFTVTVRVQPADASLILANRADSFRFPGLNRFADTEQIVGMNLIDAQGTARLVRLFCRIQNVPEILAAKYSLNKGTVIRADDLMWVRPEKNQTGITDPRLVIGRELTRTVHQSNVMRSQDLMEVPLIRDGAIVTVYARRGGISVKREMRARGTGGMGDSITLIALEGRDRLTATVTGYNQAEVNYRPASEVQRSAGIQFISGTAEPTG 359          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A350K2X5_9PLAN (Flagella basal body P-ring formation protein FlgA (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K2X5_9PLAN)

HSP 1 Score: 276 bits (706), Expect = 1.050e-90
Identity = 139/195 (71.28%), Postives = 169/195 (86.67%), Query Frame = 1
Query:  148 QTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTE-SAGPSRGGQVQTV--YEIQRGG 723
            +TEQ + ++L DAQG   ++R++CQ++R+PEILAAKYTLN+GTVVRADDLVWMRPEKDQ GI+DPR VIGRELTRTVYQ+  MR++DLIEVPL+RDGAIVTVYARRGGISVRREMRA+G G MGD ITLIALEGRDRL ATVTGYNQ EVNYRP++++ Q+ GIQFISG+++ SAG ++ G +Q    Y I+RGG
Sbjct:    5 ETEQAIGMKLLDAQGQSHELRIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKDQTGITDPRLVIGRELTRTVYQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDRLMATVTGYNQAEVNYRPANEIQQTAGIQFISGSSDASAGNTQSGTIQNAGGYAIRRGG 199          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517WUI5_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUI5_9PLAN)

HSP 1 Score: 271 bits (692), Expect = 4.670e-86
Identity = 135/230 (58.70%), Postives = 182/230 (79.13%), Query Frame = 1
Query:    1 QQALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGP-SRGG 687
            Q+ L +W+ +    A+ F+V++R+   DV ++R +    + FS++D     EQ + L L D++G VRQ RV CQ+Q +PEILAAKYTLN+GTV+RADDL+W++PEK+Q GI+DP+ VI RELTRTV+Q+  +R++DLIEVPL+RDGAIVTV ARRGGI+V+REMRARG+G +GD ITLIALEGRDRLTATV+GYNQ EVNYRP++++ + + +QFISG T S G  +RGG
Sbjct:  136 QRVLADWLKKIFRDANRFSVTIRIPHDDVQMIRTSNPASYRFSKIDRILGIEQELTLDLIDSKGAVRQTRVFCQLQNIPEILAAKYTLNKGTVIRADDLIWVKPEKNQTGITDPQLVISRELTRTVHQSHAIRSQDLIEVPLIRDGAIVTVSARRGGITVKREMRARGNGGLGDPITLIALEGRDRLTATVSGYNQAEVNYRPANEIQRDSRVQFISGATGSRGSINRGG 365          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A517W2F8_9PLAN (Flagellar basal body P-ring biosynthesis protein FlgA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W2F8_9PLAN)

HSP 1 Score: 269 bits (687), Expect = 2.650e-85
Identity = 131/230 (56.96%), Postives = 182/230 (79.13%), Query Frame = 1
Query:    7 ALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQFISGTTESAGPSRGGQVQ 696
            AL +W+ +T   A+ +++ +R+   DV ++R +    + FS++D    TEQ + L L D++G VRQ RV CQ+Q +PEILAAKYTL++GTV+RADDLVW++P+K+QKGI+DP+ VI RELTRTV+Q+  +R++DL+EVPL+RDGAIVTV ARRGGI+V+REMRARG+G +GD ITLIALEGRDRLTATV+GYNQ EVNYRP++++ + + +QFISG   S G +   +V+
Sbjct:  138 ALSDWLKKTFRDANSYSIMIRVPHDDVQMIRASNPASYRFSKIDRILGTEQELTLDLIDSKGAVRQTRVFCQLQNIPEILAAKYTLSKGTVIRADDLVWVKPQKNQKGITDPQLVISRELTRTVHQSHAIRSQDLMEVPLIRDGAIVTVSARRGGITVKREMRARGNGGLGDPITLIALEGRDRLTATVSGYNQAEVNYRPANEIQRDSRVQFISGAIGSRGSTNRARVR 367          
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Match: A0A3B1DSJ0_9ZZZZ (SAF domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DSJ0_9ZZZZ)

HSP 1 Score: 115 bits (289), Expect = 5.450e-26
Identity = 65/197 (32.99%), Postives = 107/197 (54.31%), Query Frame = 1
Query:    7 ALQNWISRTAPQASHFTVSVRLQPADVPVVRETRADGFYFSQLDLNRQTEQPVLLQLKDAQGMVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDPRQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREMRARGDGSMGDQITLIALEGRDRLTATVTGYNQTEV 597
            A+Q ++       S   V + L+  D  +V   +  G+         +  Q  + + +D +  V QVR V  +   P++LA ++ L RG +++  DLV  + E +        +++G E TR + Q QP+  +D+  VPLVR   IVTV +  GGI VRR+M++RG GS G+ ITL++L+GR  + A VT +++ EV
Sbjct:  144 AMQQYLRGKGVLLSSLKVEIHLEAKDASLVLSGKLSGYKIEGGTTPWEKRQQFVAKFQDLREDVHQVRFVAWVVPKPQVLATRFALPRGHIIKPADLVMKQIEDENAPKVRYEEIVGTETTRPIRQNQPITLQDVRSVPLVRSNDIVTVTSNVGGILVRRQMKSRGMGSRGETITLVSLDGRQSIQARVTAFHEAEV 340          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86962.20218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KMK0_9PLAN2.880e-16599.18Flagella basal body P-ring formation protein FlgA ... [more]
A0A517Q1X1_9PLAN1.910e-13782.38Flagellar basal body P-ring biosynthesis protein F... [more]
A0A518I7C7_9PLAN4.830e-10166.39Flagellar basal body P-ring biosynthesis protein F... [more]
A0A2D5GSM4_9PLAN4.320e-10065.16Flagella basal body P-ring formation protein FlgA ... [more]
A0A517VDC4_9PLAN9.620e-9964.75Flagellar basal body P-ring biosynthesis protein F... [more]
A0A517RAH1_9PLAN7.760e-9869.20Flagellar basal body P-ring biosynthesis protein F... [more]
A0A350K2X5_9PLAN1.050e-9071.28Flagella basal body P-ring formation protein FlgA ... [more]
A0A517WUI5_9PLAN4.670e-8658.70Flagellar basal body P-ring biosynthesis protein F... [more]
A0A517W2F8_9PLAN2.650e-8556.96Flagellar basal body P-ring biosynthesis protein F... [more]
A0A3B1DSJ0_9ZZZZ5.450e-2632.99SAF domain-containing protein n=1 Tax=hydrothermal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86962contigM-pyrifera_M_contig86962:1..839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score264.2
Seed ortholog evalue4.4e-68
Seed eggNOG ortholog344747.PM8797T_04945
Preferred nameflgA
KEGG koko:K02279,ko:K02386
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
EggNOG free text desc.bacterial-type flagellum organization
EggNOG OGsCOG1261@1,COG1261@2
COG Functional cat.N
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02035,ko02044
Exons1
Model size839
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86962.20218.1prot_M-pyrifera_M_contig86962.20218.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86962 105..647 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816778.922217-UTR-M-pyrifera_M_contig86962:0..1041622816778.922217-UTR-M-pyrifera_M_contig86962:0..104Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86962 1..104 -
1692278173.4880288-UTR-M-pyrifera_M_contig86962:0..1041692278173.4880288-UTR-M-pyrifera_M_contig86962:0..104Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86962 1..104 -
1622816778.9459848-UTR-M-pyrifera_M_contig86962:647..8391622816778.9459848-UTR-M-pyrifera_M_contig86962:647..839Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86962 648..839 -
1692278173.5159142-UTR-M-pyrifera_M_contig86962:647..8391692278173.5159142-UTR-M-pyrifera_M_contig86962:647..839Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86962 648..839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816778.9339714-CDS-M-pyrifera_M_contig86962:104..6471622816778.9339714-CDS-M-pyrifera_M_contig86962:104..647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86962 105..647 -
1692278173.5059736-CDS-M-pyrifera_M_contig86962:104..6471692278173.5059736-CDS-M-pyrifera_M_contig86962:104..647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86962 105..647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86962.20218.1

>prot_M-pyrifera_M_contig86962.20218.1 ID=prot_M-pyrifera_M_contig86962.20218.1|Name=mRNA_M-pyrifera_M_contig86962.20218.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MVRQVRVVCQIQRVPEILAAKYTLNRGTVVRADDLVWMRPEKDQKGISDP
RQVIGRELTRTVYQTQPMRTEDLIEVPLVRDGAIVTVYARRGGISVRREM
RARGDGSMGDQITLIALEGRDRLTATVTGYNQTEVNYRPSSQMPQSTGIQ
FISGTTESAGPSRGGQVQTVYEIQRGGRSK*
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mRNA from alignment at M-pyrifera_M_contig86962:1..839-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86962.20218.1 ID=mRNA_M-pyrifera_M_contig86962.20218.1|Name=mRNA_M-pyrifera_M_contig86962.20218.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=839bp|location=Sequence derived from alignment at M-pyrifera_M_contig86962:1..839- (Macrocystis pyrifera P11B4 male)
CAGCAGGCACTCCAGAACTGGATCAGCCGGACTGCGCCCCAGGCCAGCCA TTTTACGGTCTCGGTTCGATTGCAGCCGGCAGACGTGCCTGTGGTACGTG AAACCCGGGCCGATGGCTTTTACTTTTCACAGCTGGATCTGAACCGTCAG ACCGAGCAGCCTGTTCTGCTGCAGTTGAAAGATGCTCAGGGAATGGTCCG ACAGGTGCGGGTGGTTTGTCAGATCCAACGAGTGCCGGAAATTCTGGCAG CCAAATACACATTAAATCGGGGTACAGTGGTTCGCGCCGACGACCTGGTC TGGATGCGACCCGAAAAAGATCAGAAAGGGATCAGCGATCCGCGGCAGGT GATTGGCCGCGAACTGACCCGCACTGTCTATCAGACGCAGCCGATGCGAA CCGAAGACCTGATCGAAGTACCCCTGGTACGCGATGGTGCGATCGTAACC GTGTATGCCCGACGAGGCGGCATTTCTGTCCGCCGCGAAATGCGGGCACG CGGTGATGGCTCCATGGGAGATCAGATCACGCTGATCGCTCTGGAAGGCC GCGATCGTTTGACGGCGACGGTGACCGGTTACAACCAGACCGAAGTGAAC TACCGTCCGTCCAGCCAGATGCCACAGTCGACGGGAATCCAGTTCATCTC CGGTACGACCGAGTCAGCTGGTCCCTCGCGAGGCGGTCAGGTGCAGACCG TATACGAAATTCAAAGAGGGGGGAGGTCTAAATGAAGTCATTCAGAGGAA TCAGTGTGCGAACCTGCCAGCGAAGAAGAAAGCTGGCAGTATTACGGGAG GCGATTTCCCTGGGATGTATCGTATTGTTTTGTTCGAGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86962:1..839-

>mRNA_M-pyrifera_M_contig86962.20218.1 ID=mRNA_M-pyrifera_M_contig86962.20218.1|Name=mRNA_M-pyrifera_M_contig86962.20218.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig86962:1..839- (Macrocystis pyrifera P11B4 male)
ATGGTCCGACAGGTGCGGGTGGTTTGTCAGATCCAACGAGTGCCGGAAAT
TCTGGCAGCCAAATACACATTAAATCGGGGTACAGTGGTTCGCGCCGACG
ACCTGGTCTGGATGCGACCCGAAAAAGATCAGAAAGGGATCAGCGATCCG
CGGCAGGTGATTGGCCGCGAACTGACCCGCACTGTCTATCAGACGCAGCC
GATGCGAACCGAAGACCTGATCGAAGTACCCCTGGTACGCGATGGTGCGA
TCGTAACCGTGTATGCCCGACGAGGCGGCATTTCTGTCCGCCGCGAAATG
CGGGCACGCGGTGATGGCTCCATGGGAGATCAGATCACGCTGATCGCTCT
GGAAGGCCGCGATCGTTTGACGGCGACGGTGACCGGTTACAACCAGACCG
AAGTGAACTACCGTCCGTCCAGCCAGATGCCACAGTCGACGGGAATCCAG
TTCATCTCCGGTACGACCGAGTCAGCTGGTCCCTCGCGAGGCGGTCAGGT
GCAGACCGTATACGAAATTCAAAGAGGGGGGAGGTCTAAATGAATGGTCC
GACAGGTGCGGGTGGTTTGTCAGATCCAACGAGTGCCGGAAATTCTGGCA
GCCAAATACACATTAAATCGGGGTACAGTGGTTCGCGCCGACGACCTGGT
CTGGATGCGACCCGAAAAAGATCAGAAAGGGATCAGCGATCCGCGGCAGG
TGATTGGCCGCGAACTGACCCGCACTGTCTATCAGACGCAGCCGATGCGA
ACCGAAGACCTGATCGAAGTACCCCTGGTACGCGATGGTGCGATCGTAAC
CGTGTATGCCCGACGAGGCGGCATTTCTGTCCGCCGCGAAATGCGGGCAC
GCGGTGATGGCTCCATGGGAGATCAGATCACGCTGATCGCTCTGGAAGGC
CGCGATCGTTTGACGGCGACGGTGACCGGTTACAACCAGACCGAAGTGAA
CTACCGTCCGTCCAGCCAGATGCCACAGTCGACGGGAATCCAGTTCATCT
CCGGTACGACCGAGTCAGCTGGTCCCTCGCGAGGCGGTCAGGTGCAGACC
GTATACGAAATTCAAAGAGGGGGGAGGTCTAAATGA
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