mRNA_M-pyrifera_M_contig8575.19999.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.440e-38 Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 1 Query: 4 QAFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 QA FG NPGVT+L+EFDH+DKRPTKP+ PGD+RASE LPIFEGSEAVSGTATVLVAP KKVDHLGIKAELIGQI Sbjct: 2 QALFGFNPGVTILVEFDHIDKRPTKPSTPGDRRASEALPIFEGSEAVSGTATVLVAPGKKVDHLGIKAELIGQI 75
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A836CB39_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB39_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.150e-25 Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 7 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 A+FGL PG TVL+EFD ++RP++ PGDK+A E +PIF GSE VSG TVLVAP KKVDH+GIK E+IGQI Sbjct: 2 AWFGLQPGATVLLEFDGAERRPSRAPPPGDKKALERVPIFVGSEPVSGAVTVLVAPGKKVDHMGIKVEMIGQI 74
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S2UYV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 4.090e-9 Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 7 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 + FG P + ++F R K ++ S+ L IF G EAVSGT V++ P K+++H GIK E+IGQI Sbjct: 2 SLFGFGPAAEIRLDFADSATRTRKAVGAVGQKDSKQLLIFHGEEAVSGTVDVVLPPGKRLEHQGIKVEMIGQI 74
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S1CEN8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEN8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.000e-8 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 7 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 + FG P T+ IE + +KR + D +P+F+ +E VSG T++V +KK++H+GIK EL+G I Sbjct: 2 SIFGFGPSATIDIELNGAEKRAMRRQETLDGTEGVDVPVFQDTEDVSGKVTLVVPGSKKLEHIGIKVELLGHI 74
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A5J4XEX0_9CHLO (Subunit of retromer complex n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEX0_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 5.740e-8 Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 1 QQAFFG---LNPGVTVLIEFDHVDKRPTKPAA-PGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 Q+ FG L TV +EF D++P K A+ G +E LP++ ++V G V P KKV+H GIK +L+GQI Sbjct: 4 QKGLFGGLTLGTNATVQLEFRRADRKPVKAASIKGKGSETEQLPLYTNKDSVVGEIRVANTPGKKVEHQGIKVQLLGQI 82
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A8J2AHK6_9DINO (Hypothetical protein n=2 Tax=unclassified Amoebophrya TaxID=2558461 RepID=A0A8J2AHK6_9DINO) HSP 1 Score: 56.6 bits (135), Expect = 1.370e-7 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 7 AFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 FFG P TV I D + R T P G + E I+ E V+GTA V V P KKVDH GI+ ELIGQ+ Sbjct: 4 GFFGGTP-CTVDITLDAEENRKTAPL--GRDKKGERAYIYTDGEDVNGTAVVSVRPGKKVDHQGIRVELIGQV 73
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: I0Z698_COCSC (Vacuolar protein sorting-associated protein 26 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z698_COCSC) HSP 1 Score: 56.6 bits (135), Expect = 1.480e-7 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 16 GLNPGVTVLIEFDHVDKRPTKPA---APGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 GL G TV +EF + D P K A A G + +ETLP+F + ++G V P KK++H GIK +LIGQI Sbjct: 9 GLGQGGTVQLEFKNDDGAPVKTATVKAGGGE--TETLPLFTNKDTITGEVKVANIPGKKLEHQGIKVQLIGQI 79
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S0L8Y1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8Y1_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 1.680e-7 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 37 VLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 ++I+FD+ D + + + SE L +F+G + V GT V + P KK+DH GIK ELIGQI Sbjct: 1 IVIKFDNEDSMQMV-SMKNEHKDSEQLCLFQGKDTVGGTVEVNIKPGKKIDHTGIKIELIGQI 62
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A0G4EAR0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAR0_VITBC) HSP 1 Score: 55.8 bits (133), Expect = 2.580e-7 Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 1 Query: 28 GVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQI 225 G ++ ++FDH +R P G R E I+ E VSG+A V + P KK+DH G+K ELIGQ+ Sbjct: 11 GCSLEVQFDHEPQRKMAPL--GRDRKGEKALIYSDGEDVSGSAMVSMKPGKKIDHQGVKIELIGQV 74
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Match: A0A7S2C2A7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2A7_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 4.910e-7 Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 1 Query: 13 FGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGTATVLVAPAKKVDHLGIKAELIGQ 222 FG + I FD RPTK G LPIF+ E +G+ V V P KK++H+GIK E++GQ Sbjct: 7 FGSKSSDRIAISFDGGANRPTKRTGTGPTEV--VLPIFDNKEPFTGSVEVRVDPGKKLEHMGIKIEMVGQ 74 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8575.19999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8575.19999.1 >prot_M-pyrifera_M_contig8575.19999.1 ID=prot_M-pyrifera_M_contig8575.19999.1|Name=mRNA_M-pyrifera_M_contig8575.19999.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp QQAFFGLNPGVTVLIEFDHVDKRPTKPAAPGDKRASETLPIFEGSEAVSGback to top mRNA from alignment at M-pyrifera_M_contig8575:8564..9544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8575.19999.1 ID=mRNA_M-pyrifera_M_contig8575.19999.1|Name=mRNA_M-pyrifera_M_contig8575.19999.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=981bp|location=Sequence derived from alignment at M-pyrifera_M_contig8575:8564..9544- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8575:8564..9544- >mRNA_M-pyrifera_M_contig8575.19999.1 ID=mRNA_M-pyrifera_M_contig8575.19999.1|Name=mRNA_M-pyrifera_M_contig8575.19999.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig8575:8564..9544- (Macrocystis pyrifera P11B4 male)back to top |