mRNA_M-pyrifera_M_contig85541.19939.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85541.19939.1 vs. uniprot
Match: A0A2E5YEK6_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YEK6_9DELT) HSP 1 Score: 250 bits (638), Expect = 1.260e-80 Identity = 124/222 (55.86%), Postives = 157/222 (70.72%), Query Frame = 1 Query: 4 PTLRHAPWSQIGQGTATVGASTGWAFYEANIAASGQSGVLAGEEGDDDVALTPNYGGALKASYFVADNLALGGIVELRSFDPDPAMPLSAELVADDFETIHWLITSRYFFDPFGASLRWKPYIGLDFSYIDEVDFGSVTVNYPAPFPSEEIDILAGSYTTFSPLVGASYLWTDTSTIDFGAFYEITDKPGQTTLTFPNLGNSTADVLVEPEGLIVFFGMTFY 669 P L WS +G+GT++ G S+GWAFY A I A+G GVLAGE G DD L P YGGA K ++F D++++G + ELRSF+ DP PLSA L AD FET+H+LI+ RY+ DP G R +P++G+D SYI VDFGSV V+YP FP+E +DI A Y + S +VGASYLW D ++DFGAFYE G T LTFPNLG +TA+V V PEGLI FFG++FY Sbjct: 24 PPLEREDWSDMGEGTSSYGVSSGWAFYGAEIQAAGTGGVLAGESGVDDTDLAPRYGGAFKVNHFFTDDISVGLVAELRSFEADPIAPLSATLTADPFETMHFLISGRYWLDPRGKENRMRPFVGMDLSYIPGVDFGSVRVDYPT-FPTEYVDIDADGYYSASAVVGASYLWNDHMSVDFGAFYEFPLTAGGTELTFPNLGGATAEVEVAPEGLICFFGLSFY 244
BLAST of mRNA_M-pyrifera_M_contig85541.19939.1 vs. uniprot
Match: A0A800MEC4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MEC4_9BACT) HSP 1 Score: 246 bits (628), Expect = 3.630e-79 Identity = 120/216 (55.56%), Postives = 153/216 (70.83%), Query Frame = 1 Query: 22 PWSQIGQGTATVGASTGWAFYEANIAASGQSGVLAGEEGDDDVALTPNYGGALKASYFVADNLALGGIVELRSFDPDPAMPLSAELVADDFETIHWLITSRYFFDPFGASLRWKPYIGLDFSYIDEVDFGSVTVNYPAPFPSEEIDILAGSYTTFSPLVGASYLWTDTSTIDFGAFYEITDKPGQTTLTFPNLGNSTADVLVEPEGLIVFFGMTFY 669 PW+ IG+G+ TVG STGWAFY A I A G GVLAGE G D LTPNYG ALK + F+ D+ +LG + ELR+FD DP PLSA L AD F T H+L++SRY+ P G + RWKP++GLD YI EVDFG+V V+YP P+E+++I+ SY T + GASY+ ++D GAFYE PG+ TL FPNLGN+TADV V PEGL++F G+T+Y Sbjct: 25 PWAGIGKGSTTVGTSTGWAFYGAEIEAEGTGGVLAGETGTDHTDLTPNYGAALKVNRFITDDFSLGLVYELRNFDADPIAPLSAVLTADAFTTHHFLLSSRYWLSPKGDAGRWKPFVGLDLGYIPEVDFGAVDVSYPGAVPNEDVNIVGSSYWTLGVVAGASYMLEKGLSLDIGAFYEFALTPGEDTLIFPNLGNATADVEVWPEGLVIFGGLTWY 240
BLAST of mRNA_M-pyrifera_M_contig85541.19939.1 vs. uniprot
Match: A0A800G3F5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G3F5_9BACT) HSP 1 Score: 207 bits (527), Expect = 1.170e-63 Identity = 111/222 (50.00%), Postives = 139/222 (62.61%), Query Frame = 1 Query: 25 WSQIGQGTATVGASTGWAFYEANIAASGQSGVLAGE----EGDDDVALTPNYGGALKASYFVADNLALGGIVELRSFDPDPAMPLSAELVADDFETIHWLITSRYFFDPFGASLRWKPYIGLDFSYIDEVDFGSVTVNYPAP--FPSEEIDILAGSYTTFSPLVGASYLWTDTSTIDFGAFYEITDKPGQTTLTFPNLGNSTADVLVEPEGLIVFFGMTFYF 672 WS G+GT ++G S+GWAFY A I A G SG L E G D+ L P YGGA+K Y V D+L+LG + E+R+F+ DP PL+A L A F T H L+TSRY PFG RW+P+ G+D YI VDFGSV V YPA PSE +DI A SY + + GASYL D + D GAFYE PG+ L NLG + AD+ V P GL+VFFG+T++F Sbjct: 35 WSDKGEGTRSLGTSSGWAFYGAEIEAEGVSGALVDEGVPDTGTDNTDLAPRYGGAIKYGYSVTDSLSLGFMAEVRNFEADPIAPLTATLTAKPFSTYHLLLTSRYHLAPFGHEDRWRPFFGVDLGYIPGVDFGSVDVAYPAETGIPSEVVDIKASSYWSMGAVGGASYLLRDNLSFDMGAFYEWALTPGEKRLKLENLGGAEADIEVWPGGLLVFFGLTWFF 256
BLAST of mRNA_M-pyrifera_M_contig85541.19939.1 vs. uniprot
Match: A0A518D4Q5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D4Q5_9BACT) HSP 1 Score: 152 bits (384), Expect = 1.050e-41 Identity = 90/222 (40.54%), Postives = 123/222 (55.41%), Query Frame = 1 Query: 22 PWSQIGQGTATVGASTGWAFYEANIAASGQSGVLAGEEGDDDVALTPNYGGALKASYFVADNLALGGIVELRSFDPDPAMPLSAELVADDFETIHWLITSRYFFDPFGASLRWKPYIGLDFSYIDEVDFGSVTVNYPAPFPSEEIDILAGSYTTFSPLVGASYLWTDTSTIDFGAFYE--ITDKPGQTTLTFPN-LGNST---ADVLVEPEGLIVFFGMTFY 669 PW G ++G STGWA YEA + ++G G D L P G ALK YF+ N+ALG IVE R+FDP+ PLS+++ DD+ T H+L +SR+F DP G RWK ++G D Y+D+V+ + TV Y AP E + + SY T + G SYL +D + +FGAFYE + L P+ LG + D V PEGLI F +T+Y Sbjct: 73 PWENADAGAHSLGVSTGWALYEAEVRLQDRNGTPDLGSGTDTTDLDPTGGFALKYQYFLNSNVALGAIVEQRTFDPEVVRPLSSDIDGDDYTTYHYLFSSRFFTDPLGEDGRWKAFLGADLGYVDQVELDA-TVTY-APGFVERVTLNGDSYFTLGLVGGLSYLISDRISFEFGAFYEWPLDSSDDTLVLNIPDGLGGTNPNNVDGQVYPEGLIGFLTLTYY 292
BLAST of mRNA_M-pyrifera_M_contig85541.19939.1 vs. uniprot
Match: A0A518BSP1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BSP1_9BACT) HSP 1 Score: 138 bits (347), Expect = 4.780e-37 Identity = 80/218 (36.70%), Postives = 121/218 (55.50%), Query Frame = 1 Query: 34 IGQGTATVGASTGWAFYEANIAASGQSGVLAGEEGDDDVALTPNYGGALKASYFVADNLALGGIVELRSFDPDPAMPLSAELVADDFETIHWLITSRYFFDPFGASLRWKPYIGLDFSYIDEVDFGSVTVNYPAPFPSEEIDILAGSYTTFSPLVGASYLWTDTSTIDFGAFYEIT--DKPGQTTLTFPNLGN----STADVLVEPEGLIVFFGMTFY 669 +G+G+ T+G S+GW + A +A +SG G D L P GGA K +YF+ DN ALGGIVE RSF DP PL++++ D++ +IH+L ++RY+ DP A+ R K + G+D YID + + TV Y F E + + Y T + GAS+ D+ +++ GAF+E+ L P G +T V PEG+I F G+T++ Sbjct: 1 MGEGSHTLGVSSGWGIFNAKVALEDKSGSPELGSGTDYTKLQPIGGGAAKYNYFLTDNFALGGIVEFRSFKADPVEPLASKISPDEYTSIHYLFSTRYYTDPLQANPRMKLFGGIDLGYIDGISLDA-TVQYSPSF-QERVTLEGDEYWTLGFVGGASFWLADSLSLELGAFWEVALDSTDDDLVLNIPQGGGGTDANTVSGKVTPEGVIFFLGLTYF 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85541.19939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85541.19939.1 >prot_M-pyrifera_M_contig85541.19939.1 ID=prot_M-pyrifera_M_contig85541.19939.1|Name=mRNA_M-pyrifera_M_contig85541.19939.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp APTLRHAPWSQIGQGTATVGASTGWAFYEANIAASGQSGVLAGEEGDDDVback to top mRNA from alignment at M-pyrifera_M_contig85541:23..697- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85541.19939.1 ID=mRNA_M-pyrifera_M_contig85541.19939.1|Name=mRNA_M-pyrifera_M_contig85541.19939.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig85541:23..697- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85541:23..697- >mRNA_M-pyrifera_M_contig85541.19939.1 ID=mRNA_M-pyrifera_M_contig85541.19939.1|Name=mRNA_M-pyrifera_M_contig85541.19939.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig85541:23..697- (Macrocystis pyrifera P11B4 male)back to top |