mRNA_M-pyrifera_M_contig84886.19781.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A7X6P293_9ACTN (Bifunctional DNA primase/polymerase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P293_9ACTN) HSP 1 Score: 207 bits (528), Expect = 1.170e-65 Identity = 99/159 (62.26%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 22 ALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVHEAPIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRWA 498 AL ARRGW VLP H P GCSC DC+SP KHP+ GL+ A+ P AIR WW P AN+GIRTG SGLVVVD+DP HGG +++ +L E G R+ TGSGG HL+FAHPGG +RNSAG LG G+D+RGDGGYV+APPSRH+SGGTYRWA Sbjct: 8 ALGYARRGWAVLPLHQPARDGCSCAHDDCTSPAKHPKVSGGLHSASLSPDAIRRWWRRWPAANVGIRTGRESGLVVVDVDPRHGGDEALASLQDEHGQIDGWRIETGSGGSHLWFAHPGGTLRNSAGR-LGDGLDIRGDGGYVVAPPSRHMSGGTYRWA 165
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A2W6CRK8_9ACTN (DNA primase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A2W6CRK8_9ACTN) HSP 1 Score: 199 bits (505), Expect = 1.550e-60 Identity = 100/162 (61.73%), Postives = 110/162 (67.90%), Query Frame = 1 Query: 34 ARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVHEAPIAKGLR-----VRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRWAGS 504 A RGW V P HSP GCSC ++DC GKHP+T G +DATTDP AI WW P A +GIRTGA SGLVVVD+DPGH G S ALV E GLR VRTG GWHLYFAHP +RN AG LGPG+DVRGDGGYV+APPS H SG YRW G+ Sbjct: 4 AERGWAVFPLHSPGPQGCSCGRSDCG--GKHPRTAHGFHDATTDPQAIEGWWSRWPGAGVGIRTGASSGLVVVDVDPGHDGPASFAALVREHG---GLRQPPPRVRTGGNGWHLYFAHPSVTIRNDAGRRLGPGLDVRGDGGYVVAPPSGHPSGHHYRWVGA 160
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: X0V1G2_9ZZZZ (Prim-Pol domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0V1G2_9ZZZZ) HSP 1 Score: 179 bits (455), Expect = 1.300e-54 Identity = 84/162 (51.85%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 13 LDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVH-EAPIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRW 495 +D ALR A RGW VLP H GC+C + DCSSPGKHP+T RGL DATTD I++WW P AN+G+ TG SGLVV+D+DP +GG D + L+ P+ + + TG GG HL+F HPGG++R ALG G+D++ DGGY++APPS H +G Y W Sbjct: 1 MDAALRYAARGWPVLPLHGIRDRGCTCGRPDCSSPGKHPRTARGLKDATTDNQRIKAWWQQWPDANVGVATGNTSGLVVLDVDPRNGGDDILDDLLAAHGPLPETIESVTGGGGRHLFFKHPGGLIRTRP-NALGRGLDLKADGGYIVAPPSLHANGRRYEW 161
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A7V1V4L1_9BACT (DNA primase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7V1V4L1_9BACT) HSP 1 Score: 176 bits (446), Expect = 5.530e-52 Identity = 88/163 (53.99%), Postives = 106/163 (65.03%), Query Frame = 1 Query: 13 LDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVHE--APIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRW 495 L AL A+RGW V P HSP + CSC + C+SP KHP+T+ GL DA TD + IR WW AN+G+ TGA SGLVV+D+DP HGG +S+ L AP K + RTG GG HL FAHPG +RN A PG+DVRGDGGY++APPS HIS Y W Sbjct: 10 LSAALSYAKRGWHVFPLHSPRNGRCSCRRETCASPAKHPRTKHGLKDAATDEAVIRRWWTLWRDANIGVCTGARSGLVVIDVDPAHGGEESLADLERRYGAP-PKTVMARTGGGGRHLLFAHPGVPIRNKVQVAGLPGLDVRGDGGYIVAPPSVHISRRAYAW 171
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: UPI0016631E0A (bifunctional DNA primase/polymerase n=1 Tax=Maritimibacter lacisalsi TaxID=1526570 RepID=UPI0016631E0A) HSP 1 Score: 167 bits (424), Expect = 4.240e-50 Identity = 88/164 (53.66%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 13 LDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDID--PGHGGLDSMRALVHE-APIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRW 495 LD AL A RGW V P H C+C Q DCSS GKHP RGL DATTD +AI WW + P AN+GI TG +SGL VVD+D P G S++ L E + + + VRTGSGG H+Y +P VRNSAG LG +D+RGDGGYV+APPS H+SG Y W Sbjct: 4 LDHALEYAARGWAVFPVHGIVDGICTCGQADCSSAGKHPLGGRGLKDATTDLNAINEWWSNYPGANIGIATGPISGLFVVDVDDGPSKTGFVSLQTLEAEHGQLPRDVCVRTGSGGLHIYLMNPQINVRNSAGK-LGENIDIRGDGGYVVAPPSHHVSGNLYAW 166
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A838MYH3_9BACT (Bifunctional DNA primase/polymerase n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A838MYH3_9BACT) HSP 1 Score: 172 bits (435), Expect = 3.180e-49 Identity = 84/165 (50.91%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 7 EALDTALRMARRGWEVLPCHSPESSG-CSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVHE-APIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRW 495 + L +AL A RG+ V P H+P+ G CSCH+ DC + GKHP+T GL DATTD + IR W+ P AN+GI TGA SG V+D+DP GG +S++ L+ + A+ + +TG GGWHL F HPGG +++SA AL G+DV+GDGGY++A PS H SG TY W Sbjct: 5 QILQSALDYAERGFHVFPLHTPDPQGRCSCHK-DCGNVGKHPRTMNGLKDATTDEATIRQWFRQWPDANIGIATGAASGFFVLDVDPRSGGSESLKTLLAQHGKFAQSVWAKTGGGGWHLLFKHPGGKIKSSA-HALSSGLDVKGDGGYIVAAPSLHASGQTYAW 167
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A525W767_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Nitrospira sp. CG24D TaxID=1985130 RepID=A0A525W767_9BACT) HSP 1 Score: 171 bits (433), Expect = 8.290e-49 Identity = 77/164 (46.95%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 7 EALDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVH-EAPIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRW 495 + +++AL++A GW+V P HSP + C+C + +C S GKHP+T G+ DATTD + I +WW P AN+G+ TG VSG+VV+DIDP HGG D++ L H + + V TG GG H+YFA+ G+ ++ + LG G+D+R GGYV+APPS H+SG Y W Sbjct: 9 QPIESALKLASSGWDVFPLHSPSQNSCTCGKNNCGSIGKHPRTPHGVKDATTDHTLIEAWWKQWPEANIGVATGPVSGIVVLDIDPRHGGDDALAELEHLHGELPPTVEVLTGGGGRHVYFAYTLGLRLGNSASKLGSGLDIRAAGGYVVAPPSLHVSGQRYEW 172
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A535BBF5_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535BBF5_9CHLR) HSP 1 Score: 166 bits (421), Expect = 1.970e-46 Identity = 81/167 (48.50%), Postives = 105/167 (62.87%), Query Frame = 1 Query: 1 MSEALDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRAL-VHEAPIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRWA 498 ++ L AL + RGW V+P H+ CSCH ++C+ PGKHP+T G DA+TD I+ WW P AN+GI TGA+S LVV+D+DP HGG S+R L + + RTG GG H+ F HPGG V+N + G+DVRGDGGY++APPS H SG Y WA Sbjct: 11 VNSCLTAALVYSARGWGVIPLHTISGGSCSCHNSNCNKPGKHPRTEHGQKDASTDLETIQGWWKRWPDANVGIVTGALSRLVVLDVDPRHGGDVSLRDLEAQSGNLPSTVTSRTGGGGDHILFVHPGGQVKNRV--SFLAGLDVRGDGGYIVAPPSLHASGQRYEWA 175
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A3D1JL92_9CHLR (SF3 helicase domain-containing protein n=1 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A3D1JL92_9CHLR) HSP 1 Score: 170 bits (431), Expect = 1.980e-46 Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 1 Query: 4 SEALDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRAL-VHEAPIAKGLRVRTGSGGWHLYFAHPGGI--VRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRWAGS 504 ++ D L A RGW VLP HS C+C + DC+S GKHP+T G+ DATTD +A+ W+ P AN+GI TG SGL V+DIDP HGG D++ L V + L V TG GG HLYF HP G+ +++ AG LG G+D+R DGGYV+APPS H+SG Y W S Sbjct: 5 ADVFDFVLAYAARGWHVLPLHSVRGGRCTCGRADCTSSGKHPRTPHGVTDATTDLNALAEWYERWPDANVGIATGGKSGLAVLDIDPRHGGDDTLLDLEVKHGKLPSTLEVLTGGGGRHLYFKHPAGVQYLKSGAGV-LGAGLDIRADGGYVVAPPSNHVSGNPYVWEAS 173
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Match: A0A3M1QYI7_9BACT (DUF3987 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1QYI7_9BACT) HSP 1 Score: 168 bits (426), Expect = 2.340e-45 Identity = 81/166 (48.80%), Postives = 105/166 (63.25%), Query Frame = 1 Query: 1 MSEALDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNDATTDPSAIRSWWHHSPHANLGIRTGAVSGLVVVDIDPGHGGLDSMRALVHE-APIAKGLRVRTGSGGWHLYFAHPGGIVRNSAGTALGPGVDVRGDGGYVIAPPSRHISGGTYRW 495 +S+ AL A W V+ HS CSC + C + GKHP+TR GL DA D + I WW+ P AN+G++TG +G+VV+D+DP HGG +S+ LV E + + TG GG HL F HPGG VRN + L PG+DVRGDGGY++APPS H+SGG YRW Sbjct: 41 LSDLKRAALWYAAHRWPVVALHSVVEGRCSCCKPGCGNAGKHPRTRHGLKDARIDDADIDHWWNRWPDANIGVKTGVTTGIVVIDVDPRHGGDESLAELVREYGDLPSTVEALTGGGGRHLVFKHPGGTVRNRSN--LRPGIDVRGDGGYIVAPPSNHMSGGQYRW 204 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84886.19781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84886.19781.1 >prot_M-pyrifera_M_contig84886.19781.1 ID=prot_M-pyrifera_M_contig84886.19781.1|Name=mRNA_M-pyrifera_M_contig84886.19781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp MSEALDTALRMARRGWEVLPCHSPESSGCSCHQTDCSSPGKHPQTRRGLNback to top mRNA from alignment at M-pyrifera_M_contig84886:16..519- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84886.19781.1 ID=mRNA_M-pyrifera_M_contig84886.19781.1|Name=mRNA_M-pyrifera_M_contig84886.19781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig84886:16..519- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84886:16..519- >mRNA_M-pyrifera_M_contig84886.19781.1 ID=mRNA_M-pyrifera_M_contig84886.19781.1|Name=mRNA_M-pyrifera_M_contig84886.19781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig84886:16..519- (Macrocystis pyrifera P11B4 male)back to top |