mRNA_M-pyrifera_M_contig8476.19745.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: A0A7M7T650_NASVI (Uncharacterized protein n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7T650_NASVI) HSP 1 Score: 74.7 bits (182), Expect = 3.880e-15 Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 1 LCVKISKD--FTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 LC++ S+D L GY DASH D ++ RSVSGY+++ G AV+W+S+ Q VALSS E+EY++L A+QEA++L Sbjct: 76 LCLQYSQDKNSNLIGYCDASHGCDGHDARSVSGYIFIMQGGAVSWNSRRQQTVALSSTEAEYLSLTAAAQEAIWL 150
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: UPI001F042557 (secreted RxLR effector protein 161-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F042557) HSP 1 Score: 74.3 bits (181), Expect = 1.710e-14 Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 10 KISKDFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 KIS D L GY DA + D ++ RS SG V++ +G A++W+SK+QP VALS+ ESEYIAL YA+QE V+L Sbjct: 81 KISID--LEGYSDADWASDTDDRRSTSGNVFIISGGAISWASKKQPTVALSTSESEYIALCYATQELVWL 148
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: UPI0012454B2B (secreted RxLR effector protein 161-like n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI0012454B2B) HSP 1 Score: 72.0 bits (175), Expect = 5.290e-14 Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 22 DFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 D L GYFD + DR+ ++S +GYV++ +G A++W SK+Q +ALS+ ES+YIA + A+QEAV+L Sbjct: 67 DLRLRGYFDVDWASDRDEHKSTTGYVFLLSGAAISWCSKKQSCIALSTMESDYIACSIATQEAVWL 132
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: UPI0014487C49 (secreted RxLR effector protein 161-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI0014487C49) HSP 1 Score: 72.4 bits (176), Expect = 6.970e-14 Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 1 LCVKISKDFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 LC + KD L GY +A H D + +S SGYV++ + A++WSSK+Q V+LS E+EY+ALA A+QE V+L Sbjct: 45 LCYQGGKDLRLVGYSNADHGGDLDERKSTSGYVFLLSDGAISWSSKKQSSVSLSMMEAEYVALASAAQEVVWL 117
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: UPI0014450CC2 (secreted RxLR effector protein 161-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI0014450CC2) HSP 1 Score: 72.8 bits (177), Expect = 8.370e-14 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 1 LCVKISKDFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 LC + KD L GY DA D + +S SGY+++ + A++WSSK+Q V+LS+ ESEY+ALA A+QE ++L Sbjct: 92 LCYQGGKDLRLVGYSDADQGGDLDERKSTSGYIFLLSDGAISWSSKKQSCVSLSTMESEYVALASAAQEVIWL 164
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: A0A7D9IWX2_PARCT (Effector candidate, partial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IWX2_PARCT) HSP 1 Score: 73.6 bits (179), Expect = 1.020e-13 Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 22 DFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 D + GY DA + D ++ RS SG V++ +G A++W+SK+QP VALS+ ESEYIAL +A+QEAV+L Sbjct: 178 DANVEGYSDADWASDSDDRRSTSGNVFVMSGGAISWASKKQPTVALSTSESEYIALCFATQEAVWL 243
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: A0A270AGN3_MOROS (Uncharacterized protein (Fragment) n=5 Tax=Bacteria TaxID=2 RepID=A0A270AGN3_MOROS) HSP 1 Score: 68.6 bits (166), Expect = 1.020e-13 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 31 LHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 L GY D+ + D+N+ +SV+GYV+M AG A+TW SK+Q VALSS E+EY+AL A +E ++L Sbjct: 3 LVGYCDSDWAADKNDRKSVTGYVFMMAGAAITWKSKKQQTVALSSTEAEYMALGDAVKEVLWL 65
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: A0A6S7HL91_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HL91_PARCT) HSP 1 Score: 73.6 bits (179), Expect = 1.190e-13 Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 22 DFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 D + GY DA + D ++ RS SG V++ +G A++W+SK+QP VALS+ ESEYIAL +A+QEAV+L Sbjct: 147 DANVEGYSDADWASDSDDRRSTSGNVFVMSGGAISWASKKQPTVALSTSESEYIALCFATQEAVWL 212
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: UPI0014470729 (secreted RxLR effector protein 161-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI0014470729) HSP 1 Score: 71.6 bits (174), Expect = 2.060e-13 Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 1 LCVKISKDFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYL 219 +C + KD GY D H D + +S SGYV++ + A++WSSK++ V+LS+ E+EY+ALA A+QEAV+L Sbjct: 72 ICYQGGKDLQFVGYSDVDHGGDLDERKSTSGYVFLLSDGAISWSSKKRSCVSLSTMEAEYVALASATQEAVWL 144
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Match: UPI001ABC3FD6 (secreted RxLR effector protein 161-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001ABC3FD6) HSP 1 Score: 71.2 bits (173), Expect = 2.090e-13 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 4 CVKISKDF-TLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVVALSSCESEYIALAYASQEAVYLS 222 C K D +L GY D+ H+ D N+ +S SG VY G VTW+S++Q VVA+SSCE+EY+A A A+ + V+LS Sbjct: 76 CYKRGSDGPSLVGYSDSDHAGDTNDRKSTSGVVYFLGGSVVTWTSQKQKVVAISSCEAEYVAAAAATCQGVWLS 149 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8476.19745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8476.19745.1 >prot_M-pyrifera_M_contig8476.19745.1 ID=prot_M-pyrifera_M_contig8476.19745.1|Name=mRNA_M-pyrifera_M_contig8476.19745.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp LCVKISKDFTLHGYFDASHSDDRNNNRSVSGYVYMFAGRAVTWSSKEQPVback to top mRNA from alignment at M-pyrifera_M_contig8476:1490..1711- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8476.19745.1 ID=mRNA_M-pyrifera_M_contig8476.19745.1|Name=mRNA_M-pyrifera_M_contig8476.19745.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=222bp|location=Sequence derived from alignment at M-pyrifera_M_contig8476:1490..1711- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8476:1490..1711- >mRNA_M-pyrifera_M_contig8476.19745.1 ID=mRNA_M-pyrifera_M_contig8476.19745.1|Name=mRNA_M-pyrifera_M_contig8476.19745.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig8476:1490..1711- (Macrocystis pyrifera P11B4 male)back to top |