mRNA_M-pyrifera_M_contig84623.19723.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A8C9TCL4_SCLFO (DEP domain containing 5, GATOR1 subcomplex subunit n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TCL4_SCLFO) HSP 1 Score: 64.3 bits (155), Expect = 4.900e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 22 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 162
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: UPI0008781A92 (GATOR complex protein DEPDC5 isoform X6 n=2 Tax=Scleropages formosus TaxID=113540 RepID=UPI0008781A92) HSP 1 Score: 64.3 bits (155), Expect = 5.030e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 72 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 212
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A8C9T722_SCLFO (DEP domain containing 5, GATOR1 subcomplex subunit n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9T722_SCLFO) HSP 1 Score: 64.3 bits (155), Expect = 5.120e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 22 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 162
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A8C9S1F0_SCLFO (DEP domain containing 5, GATOR1 subcomplex subunit n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9S1F0_SCLFO) HSP 1 Score: 64.3 bits (155), Expect = 5.130e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 22 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 162
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A8C9WQB8_SCLFO (DEP domain containing 5, GATOR1 subcomplex subunit n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9WQB8_SCLFO) HSP 1 Score: 64.3 bits (155), Expect = 5.140e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 22 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 162
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A8C9RXC2_SCLFO (DEP domain containing 5, GATOR1 subcomplex subunit n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RXC2_SCLFO) HSP 1 Score: 64.3 bits (155), Expect = 5.150e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 35 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 175
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A8C9S679_SCLFO (DEP domain containing 5, GATOR1 subcomplex subunit n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9S679_SCLFO) HSP 1 Score: 64.3 bits (155), Expect = 5.160e-9 Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++++ SV + VA+ + V V +V+ + L V L FK QYIGR DM+ +K+SLVG C +++V + I A+ L GE + G ++EDTRV Sbjct: 35 ELMVNPKVFPQVSIGDIVEIAHPNDEYSPLL--LQVRSLKEDLQKETISVDQTVAQAFKLRAYQDVYVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVGTCAYVTQKVEFAGIRAQATELWVKGEKVTCGYISEDTRV 175
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: UPI000A1C7213 (DEP domain-containing protein 5 n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C7213) HSP 1 Score: 63.9 bits (154), Expect = 7.000e-9 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +LV++ +FP +++G + ++ +P L L V+++++ SV + VA+V + V V +V+ + L V L FK QYIGR DM+ +K+SLV C +++V + I A+ L GE + G ++EDTRV Sbjct: 22 ELVVNPKVFPQASLGDLVEIAHPTDEYSPLL--LQVKSLKEDLQKETISVDQTVAQVFKLRAYQDVIVNIVDPK----DVTLDLVELTFKDQYIGRGDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRV 162
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: UPI0004954B71 (GATOR complex protein DEPDC5 isoform X1 n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=UPI0004954B71) HSP 1 Score: 63.9 bits (154), Expect = 7.000e-9 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +LV++ LFP ++G + ++ +P L L V++++ SV + VA+ F + V V +V+ + +L V L FK QYIGR DM+ +K++LV C+ +++V + I A+ L GE + G ++EDTRV Sbjct: 22 ELVVNPKLFPQVSLGDIIEIAHPTDEYSPLL--LQVKSLKDDLQKETISVDQTVAQAFKFRAYQDVIVNIVDPK----DVSLDLVELTFKDQYIGRGDMWRLKKTLVTTCVYVTQKVEFAGIRAQAGELWVKGEKVTCGYISEDTRV 162
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Match: A0A6J2UVG4_CHACN (GATOR complex protein DEPDC5 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UVG4_CHACN) HSP 1 Score: 63.9 bits (154), Expect = 7.010e-9 Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 34 DLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVRQLPSNAAASVAKGVAEVLGFASRMAVEVELVEDQVSREAAALSSVVLLFKGQYIGRADMYHVKRSLVGECIQRSKEVLYGSISAEVHALHRDGEVRSSGLVTEDTRV 474 +L+++ +FP ++G + ++ +P L L V+++R+ SV + VA+ + V + +VE + L V L FK QYIGR DM+ +K+SLV C +++V + I A+ L GE + G ++EDTRV Sbjct: 26 ELMMNPKVFPQVSLGDIVEIAHPNDEYSPLL--LQVKSLREDLQKETVSVDQTVAQAFKLRAYQDVFINIVE----AKDVTLDLVELTFKDQYIGRGDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRV 166 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84623.19723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84623.19723.1 >prot_M-pyrifera_M_contig84623.19723.1 ID=prot_M-pyrifera_M_contig84623.19723.1|Name=mRNA_M-pyrifera_M_contig84623.19723.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp LVLHDPFHEPLDLVLSASLFPASAVGKVAQLRQKRAPNAPALGFLTVQAVback to top mRNA from alignment at M-pyrifera_M_contig84623:34..558- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84623.19723.1 ID=mRNA_M-pyrifera_M_contig84623.19723.1|Name=mRNA_M-pyrifera_M_contig84623.19723.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig84623:34..558- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84623:34..558- >mRNA_M-pyrifera_M_contig84623.19723.1 ID=mRNA_M-pyrifera_M_contig84623.19723.1|Name=mRNA_M-pyrifera_M_contig84623.19723.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig84623:34..558- (Macrocystis pyrifera P11B4 male)back to top |