mRNA_M-pyrifera_M_contig8456.19715.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE) HSP 1 Score: 114 bits (286), Expect = 5.960e-28 Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDL 231 LFV F +Y++VS T+F+TFVCD LDDG++YLRADY LTC + H Y VYA +M+LVYP+GIP F WWL +HRH+L Sbjct: 21 LFVMFVIYATVSYTIFETFVCDPLDDGISYLRADYSLTCETETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHEL 97
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: D7G021_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G021_ECTSI) HSP 1 Score: 113 bits (283), Expect = 7.840e-28 Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDL 231 +F+ FFVYSSVS +F TF C++L+DGV+YLRADY C+S HV + VYA VMVLVYP+GIPA F WWL R+RHDL Sbjct: 88 IFILFFVYSSVSRDIFLTFSCETLEDGVSYLRADYGFVCFSRRHVAFRVYAGVMVLVYPLGIPALFGWWLRRNRHDL 164
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 110 bits (275), Expect = 1.840e-26 Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDL 231 LF+ F +Y++VS T+F+TFVCD LDDG +YLR+DY LTC + H Y VYA +M+LVYP+GIP F WWL +HRH+L Sbjct: 815 LFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHEL 891
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.920e-26 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDLT 234 LF+ F +YSSVS T+F+TF+C++LDD V YLRADY LTC + H VYA +MVLVYPIGIPA FAWWLA +R DL Sbjct: 145 LFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLV 222
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 108 bits (270), Expect = 8.640e-26 Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDLT 234 LF++F VYSSVS +F+TFVC++LDDGV YLRADY LTC + H + YA +M+LVYP+GIP ++WWL +RHDL Sbjct: 841 LFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLV 918
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.400e-25 Identity = 50/78 (64.10%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDLT 234 LF+ F YSSVS T+F+TF+C++LDD V YLRADY LTC + H VYA +MVLVYPIGIPA FAWWLA +R DL Sbjct: 123 LFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLV 200
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.080e-25 Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDL 231 LFV FF+YSSVS TVF+TFVCD+LDDGV+YLRADY LTC + + + YA+VMV VYPIGIPA FAW L +R DL Sbjct: 813 LFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDL 889
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 106 bits (265), Expect = 4.130e-25 Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDL 231 LFV F +Y++VS T+F+TFVCD+LDDG +YLRADY LTC + H Y VYA + VLVYP+GIP F WWL ++RH+L Sbjct: 821 LFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHEL 897
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 106 bits (264), Expect = 5.640e-25 Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDL 231 LFV F +Y++VS T+F+TFVCD+LDDG +YLRADY LTC + H Y VYA + VLVYP+GIP F WWL ++RH+L Sbjct: 802 LFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHEL 878
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 101 bits (251), Expect = 1.720e-23 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 1 LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYASVMVLVYPIGIPAAFAWWLARHRHDLT 234 LF+ F VYSSVS +F+TFVC++LDDGV YLRADY L C + H VYA +M+ VYP GIPA F WL +RHDL Sbjct: 165 LFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLV 242 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8456.19715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8456.19715.1 >prot_M-pyrifera_M_contig8456.19715.1 ID=prot_M-pyrifera_M_contig8456.19715.1|Name=mRNA_M-pyrifera_M_contig8456.19715.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp LFVAFFVYSSVSSTVFKTFVCDSLDDGVNYLRADYRLTCWSHEHVGYVVYback to top mRNA from alignment at M-pyrifera_M_contig8456:1511..1744- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8456.19715.1 ID=mRNA_M-pyrifera_M_contig8456.19715.1|Name=mRNA_M-pyrifera_M_contig8456.19715.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=234bp|location=Sequence derived from alignment at M-pyrifera_M_contig8456:1511..1744- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8456:1511..1744- >mRNA_M-pyrifera_M_contig8456.19715.1 ID=mRNA_M-pyrifera_M_contig8456.19715.1|Name=mRNA_M-pyrifera_M_contig8456.19715.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig8456:1511..1744- (Macrocystis pyrifera P11B4 male)back to top |